RNA–Protein interactions for RNA: ENST00000639358.1

KCNQ3-207, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-207ENST00000639358 PLCH2O75038 1416 aa22.23■■□□□ 1.15
KCNQ3-207ENST00000639358 TTC37Q6PGP7 1564 aa22.22■■□□□ 1.15
KCNQ3-207ENST00000639358 FER1L4A9Z1Z3 1794 aa22.21■■□□□ 1.15
KCNQ3-207ENST00000639358 SOCS7O14512 581 aa22.21■■□□□ 1.15
KCNQ3-207ENST00000639358 CEBPAP49715 358 aaPredicted RBP22.21■■□□□ 1.15
KCNQ3-207ENST00000639358 EFCAB2Q5VUJ9 269 aa22.21■■□□□ 1.15
KCNQ3-207ENST00000639358 SIGLEC1Q9BZZ2 1709 aa22.2■■□□□ 1.14
KCNQ3-207ENST00000639358 ILDR2Q71H61 639 aa22.19■■□□□ 1.14
KCNQ3-207ENST00000639358 C9orf84Q5VXU9 1444 aa22.19■■□□□ 1.14
KCNQ3-207ENST00000639358 ARHGEF12Q9NZN5 1544 aa22.18■■□□□ 1.14
KCNQ3-207ENST00000639358 EEA1Q15075 1411 aa22.18■■□□□ 1.14
KCNQ3-207ENST00000639358 CDK11AQ9UQ88 783 aaPredicted RBP22.16■■□□□ 1.14
KCNQ3-207ENST00000639358 MYT1LQ9UL68 1186 aa22.15■■□□□ 1.14
KCNQ3-207ENST00000639358 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
KCNQ3-207ENST00000639358 PREX1Q8TCU6 1659 aa22.14■■□□□ 1.14
KCNQ3-207ENST00000639358 UHRF1BP1Q6BDS2 1440 aa22.14■■□□□ 1.13
KCNQ3-207ENST00000639358 CDK13Q14004 1512 aaKnown RBP22.12■■□□□ 1.13
KCNQ3-207ENST00000639358 AFAP1Q8N556 730 aa22.09■■□□□ 1.13
KCNQ3-207ENST00000639358 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
KCNQ3-207ENST00000639358 ZNF518AQ6AHZ1 1483 aa22.09■■□□□ 1.13
KCNQ3-207ENST00000639358 PTPRTO14522 1441 aa22.06■■□□□ 1.12
KCNQ3-207ENST00000639358 STRCQ7RTU9 1775 aa22.04■■□□□ 1.12
KCNQ3-207ENST00000639358 FMN1Q68DA7 1419 aa22.04■■□□□ 1.12
KCNQ3-207ENST00000639358 SETD1BQ9UPS6 1966 aaKnown RBP22.03■■□□□ 1.12
KCNQ3-207ENST00000639358 MYO5CQ9NQX4 1742 aa22.01■■□□□ 1.11
KCNQ3-207ENST00000639358 ARHGAP5Q13017 1502 aa22■■□□□ 1.11
KCNQ3-207ENST00000639358 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
KCNQ3-207ENST00000639358 CLIP1P30622 1438 aa21.98■■□□□ 1.11
KCNQ3-207ENST00000639358 TRAPPC8Q9Y2L5 1435 aa21.97■■□□□ 1.11
KCNQ3-207ENST00000639358 KDM5CP41229 1560 aa21.97■■□□□ 1.11
KCNQ3-207ENST00000639358 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
KCNQ3-207ENST00000639358 SPATA31D1Q6ZQQ2 1576 aa21.96■■□□□ 1.11
KCNQ3-207ENST00000639358 KIF14Q15058 1648 aa21.95■■□□□ 1.1
KCNQ3-207ENST00000639358 MLH3Q9UHC1 1453 aa21.95■■□□□ 1.1
KCNQ3-207ENST00000639358 REREQ9P2R6 1566 aa21.94■■□□□ 1.1
KCNQ3-207ENST00000639358 DIP2CQ9Y2E4 1556 aa21.94■■□□□ 1.1
KCNQ3-207ENST00000639358 IQSEC2Q5JU85 1478 aa21.93■■□□□ 1.1
KCNQ3-207ENST00000639358 EHMT2Q96KQ7 1210 aa21.92■■□□□ 1.1
KCNQ3-207ENST00000639358 CNTLNQ9NXG0 1405 aa21.91■■□□□ 1.1
KCNQ3-207ENST00000639358 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
KCNQ3-207ENST00000639358 AGLP35573 1532 aa21.9■■□□□ 1.1
KCNQ3-207ENST00000639358 C3P01024 1663 aa21.9■■□□□ 1.1
KCNQ3-207ENST00000639358 NCOA1Q15788 1441 aa21.89■■□□□ 1.1
KCNQ3-207ENST00000639358 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
KCNQ3-207ENST00000639358 ABCA6Q8N139 1617 aa21.86■■□□□ 1.09
KCNQ3-207ENST00000639358 NPATQ14207 1427 aa21.83■■□□□ 1.09
KCNQ3-207ENST00000639358 UBAP1LF5GYI3 381 aa21.83■■□□□ 1.09
KCNQ3-207ENST00000639358 NCKAP5LQ9HCH0 1330 aa21.81■■□□□ 1.08
KCNQ3-207ENST00000639358 ZMYM3Q14202 1370 aa21.81■■□□□ 1.08
KCNQ3-207ENST00000639358 ABCC1P33527 1531 aa21.8■■□□□ 1.08
KCNQ3-207ENST00000639358 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
KCNQ3-207ENST00000639358 PKD2Q13563 968 aa21.8■■□□□ 1.08
KCNQ3-207ENST00000639358 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
KCNQ3-207ENST00000639358 ZNF335Q9H4Z2 1342 aaPredicted RBP21.79■■□□□ 1.08
KCNQ3-207ENST00000639358 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
KCNQ3-207ENST00000639358 SPAG9O60271 1321 aaKnown RBP21.76■■□□□ 1.07
KCNQ3-207ENST00000639358 PREX2Q70Z35 1606 aa21.75■■□□□ 1.07
KCNQ3-207ENST00000639358 KIDINS220Q9ULH0 1771 aa21.74■■□□□ 1.07
KCNQ3-207ENST00000639358 ITSN2Q9NZM3 1697 aa21.73■■□□□ 1.07
KCNQ3-207ENST00000639358 CCDC18Q5T9S5 1454 aa21.73■■□□□ 1.07
KCNQ3-207ENST00000639358 MROH2AA6NES4 1674 aa21.71■■□□□ 1.07
KCNQ3-207ENST00000639358 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
KCNQ3-207ENST00000639358 HNRNPMP52272 730 aaKnown RBP eCLIP21.7■■□□□ 1.06
KCNQ3-207ENST00000639358 CASKIN1Q8WXD9 1431 aa21.7■■□□□ 1.06
KCNQ3-207ENST00000639358 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
KCNQ3-207ENST00000639358 SAMD9LQ8IVG5 1584 aa21.69■■□□□ 1.06
KCNQ3-207ENST00000639358 GGT6Q6P531 493 aa21.68■■□□□ 1.06
KCNQ3-207ENST00000639358 LRRIQ1Q96JM4 1722 aa21.67■■□□□ 1.06
KCNQ3-207ENST00000639358 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
KCNQ3-207ENST00000639358 TCOF1Q13428 1488 aaKnown RBP21.64■■□□□ 1.06
KCNQ3-207ENST00000639358 PTPRKQ15262 1439 aa21.64■■□□□ 1.06
KCNQ3-207ENST00000639358 CFDP1Q9UEE9 299 aaPredicted RBP21.64■■□□□ 1.05
KCNQ3-207ENST00000639358 TOM1O60784 492 aa21.63■■□□□ 1.05
KCNQ3-207ENST00000639358 SYCP2Q9BX26 1530 aa21.63■■□□□ 1.05
KCNQ3-207ENST00000639358 A2MP01023 1474 aa21.63■■□□□ 1.05
KCNQ3-207ENST00000639358 CDC42BPAQ5VT25 1732 aa21.62■■□□□ 1.05
KCNQ3-207ENST00000639358 SUPT6HQ7KZ85 1726 aaKnown RBP21.62■■□□□ 1.05
KCNQ3-207ENST00000639358 KIAA1107Q9UPP5 1409 aa21.62■■□□□ 1.05
KCNQ3-207ENST00000639358 CEP170BQ9Y4F5 1589 aaPredicted RBP21.61■■□□□ 1.05
KCNQ3-207ENST00000639358 PLEKHH2Q8IVE3 1493 aa21.61■■□□□ 1.05
KCNQ3-207ENST00000639358 PIP4K2BP78356 416 aa21.61■■□□□ 1.05
KCNQ3-207ENST00000639358 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
KCNQ3-207ENST00000639358 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
KCNQ3-207ENST00000639358 CLTCQ00610 1675 aaKnown RBP21.6■■□□□ 1.05
KCNQ3-207ENST00000639358 MYO3AQ8NEV4 1616 aa21.6■■□□□ 1.05
KCNQ3-207ENST00000639358 HSPA1LP34931 641 aa21.6■■□□□ 1.05
KCNQ3-207ENST00000639358 ZNF142P52746 1687 aaPredicted RBP21.6■■□□□ 1.05
KCNQ3-207ENST00000639358 CCNB3Q8WWL7 1395 aa21.56■■□□□ 1.04
KCNQ3-207ENST00000639358 A2ML1A8K2U0 1454 aa21.56■■□□□ 1.04
KCNQ3-207ENST00000639358 FYCO1Q9BQS8 1478 aa21.56■■□□□ 1.04
KCNQ3-207ENST00000639358 PLXNC1O60486 1568 aa21.56■■□□□ 1.04
KCNQ3-207ENST00000639358 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.04
KCNQ3-207ENST00000639358 INO80Q9ULG1 1556 aaPredicted RBP21.52■■□□□ 1.04
KCNQ3-207ENST00000639358 CPS1P31327 1500 aa21.51■■□□□ 1.03
KCNQ3-207ENST00000639358 ANKLE2Q86XL3 938 aa21.51■■□□□ 1.03
KCNQ3-207ENST00000639358 MED1Q15648 1581 aaPredicted RBP21.5■■□□□ 1.03
KCNQ3-207ENST00000639358 DNMT1P26358 1616 aaKnown RBP21.49■■□□□ 1.03
KCNQ3-207ENST00000639358 SHANK2Q9UPX8 1470 aa21.49■■□□□ 1.03
KCNQ3-207ENST00000639358 TNRQ92752 1358 aa21.48■■□□□ 1.03
KCNQ3-207ENST00000639358 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms