RNA–Protein interactions for RNA: ENST00000638149.1

GABRB3-226, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-226ENST00000638149 UHRF1BP1Q6BDS2 1440 aa7.71□□□□□ -1.17
GABRB3-226ENST00000638149 SCAPERQ9BY12 1400 aa7.71□□□□□ -1.17
GABRB3-226ENST00000638149 SCAF1Q9H7N4 1312 aaKnown RBP7.71□□□□□ -1.18
GABRB3-226ENST00000638149 PREX1Q8TCU6 1659 aa7.7□□□□□ -1.18
GABRB3-226ENST00000638149 NUP153P49790 1475 aaKnown RBP7.7□□□□□ -1.18
GABRB3-226ENST00000638149 CSRNP3Q8WYN3 585 aa7.7□□□□□ -1.18
GABRB3-226ENST00000638149 HECW1Q76N89 1606 aa7.7□□□□□ -1.18
GABRB3-226ENST00000638149 MAGI2Q86UL8 1455 aa7.69□□□□□ -1.18
GABRB3-226ENST00000638149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.69□□□□□ -1.18
GABRB3-226ENST00000638149 SAMD9Q5K651 1589 aa7.69□□□□□ -1.18
GABRB3-226ENST00000638149 EFCAB2Q5VUJ9 269 aa7.69□□□□□ -1.18
GABRB3-226ENST00000638149 C9orf84Q5VXU9 1444 aa7.69□□□□□ -1.18
GABRB3-226ENST00000638149 TTC37Q6PGP7 1564 aa7.68□□□□□ -1.18
GABRB3-226ENST00000638149 CDK11AQ9UQ88 783 aaPredicted RBP7.68□□□□□ -1.18
GABRB3-226ENST00000638149 ATP10AO60312 1499 aa7.68□□□□□ -1.18
GABRB3-226ENST00000638149 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
GABRB3-226ENST00000638149 UBAP1LF5GYI3 381 aa7.67□□□□□ -1.18
GABRB3-226ENST00000638149 CDK13Q14004 1512 aaKnown RBP7.66□□□□□ -1.18
GABRB3-226ENST00000638149 SIGLEC1Q9BZZ2 1709 aa7.66□□□□□ -1.18
GABRB3-226ENST00000638149 UBTFP17480 764 aaKnown RBP7.65□□□□□ -1.18
GABRB3-226ENST00000638149 ARHGAP5Q13017 1502 aa7.65□□□□□ -1.18
GABRB3-226ENST00000638149 ARHGEF12Q9NZN5 1544 aa7.64□□□□□ -1.19
GABRB3-226ENST00000638149 PLCH2O75038 1416 aa7.64□□□□□ -1.19
GABRB3-226ENST00000638149 AFAP1Q8N556 730 aa7.64□□□□□ -1.19
GABRB3-226ENST00000638149 MYO5CQ9NQX4 1742 aa7.64□□□□□ -1.19
GABRB3-226ENST00000638149 ZNF518AQ6AHZ1 1483 aa7.63□□□□□ -1.19
GABRB3-226ENST00000638149 PIP4K2BP78356 416 aa7.63□□□□□ -1.19
GABRB3-226ENST00000638149 PHF23Q9BUL5 403 aaPredicted RBP7.63□□□□□ -1.19
GABRB3-226ENST00000638149 SENP3Q9H4L4 574 aaPredicted RBP7.63□□□□□ -1.19
GABRB3-226ENST00000638149 PTPRTO14522 1441 aa7.62□□□□□ -1.19
GABRB3-226ENST00000638149 CLIP1P30622 1438 aa7.62□□□□□ -1.19
GABRB3-226ENST00000638149 STRCQ7RTU9 1775 aa7.62□□□□□ -1.19
GABRB3-226ENST00000638149 ZNF777Q9ULD5 760 aaPredicted RBP7.62□□□□□ -1.19
GABRB3-226ENST00000638149 NCKAP5LQ9HCH0 1330 aa7.61□□□□□ -1.19
GABRB3-226ENST00000638149 KIF14Q15058 1648 aa7.61□□□□□ -1.19
GABRB3-226ENST00000638149 C3P01024 1663 aa7.6□□□□□ -1.19
GABRB3-226ENST00000638149 TRAPPC8Q9Y2L5 1435 aa7.6□□□□□ -1.19
GABRB3-226ENST00000638149 ZNF335Q9H4Z2 1342 aaPredicted RBP7.59□□□□□ -1.19
GABRB3-226ENST00000638149 EEA1Q15075 1411 aa7.59□□□□□ -1.19
GABRB3-226ENST00000638149 FMN1Q68DA7 1419 aa7.59□□□□□ -1.19
GABRB3-226ENST00000638149 CAMSAP1Q5T5Y3 1602 aa7.59□□□□□ -1.19
GABRB3-226ENST00000638149 DIP2CQ9Y2E4 1556 aa7.58□□□□□ -1.2
GABRB3-226ENST00000638149 SETD1BQ9UPS6 1966 aaKnown RBP7.57□□□□□ -1.2
GABRB3-226ENST00000638149 IQSEC2Q5JU85 1478 aa7.57□□□□□ -1.2
GABRB3-226ENST00000638149 GGT6Q6P531 493 aa7.57□□□□□ -1.2
GABRB3-226ENST00000638149 PPP6R1Q9UPN7 881 aa7.57□□□□□ -1.2
GABRB3-226ENST00000638149 NCOA1Q15788 1441 aa7.57□□□□□ -1.2
GABRB3-226ENST00000638149 CNTLNQ9NXG0 1405 aa7.57□□□□□ -1.2
GABRB3-226ENST00000638149 ABCA6Q8N139 1617 aa7.56□□□□□ -1.2
GABRB3-226ENST00000638149 LTBP4Q8N2S1 1624 aa7.56□□□□□ -1.2
GABRB3-226ENST00000638149 SUPT6HQ7KZ85 1726 aaKnown RBP7.56□□□□□ -1.2
GABRB3-226ENST00000638149 TROQ12816 1431 aaPredicted RBP7.56□□□□□ -1.2
GABRB3-226ENST00000638149 TOM1O60784 492 aa7.56□□□□□ -1.2
GABRB3-226ENST00000638149 HSPA1LP34931 641 aa7.55□□□□□ -1.2
GABRB3-226ENST00000638149 PKD2Q13563 968 aa7.55□□□□□ -1.2
GABRB3-226ENST00000638149 CHIC1Q5VXU3 224 aa7.55□□□□□ -1.2
GABRB3-226ENST00000638149 ZMYM3Q14202 1370 aa7.55□□□□□ -1.2
GABRB3-226ENST00000638149 KDM5CP41229 1560 aa7.54□□□□□ -1.2
GABRB3-226ENST00000638149 SPAG9O60271 1321 aaKnown RBP7.54□□□□□ -1.2
GABRB3-226ENST00000638149 MLH3Q9UHC1 1453 aa7.54□□□□□ -1.2
GABRB3-226ENST00000638149 AGLP35573 1532 aa7.53□□□□□ -1.2
GABRB3-226ENST00000638149 REREQ9P2R6 1566 aa7.53□□□□□ -1.2
GABRB3-226ENST00000638149 CLTCQ00610 1675 aaKnown RBP7.52□□□□□ -1.21
GABRB3-226ENST00000638149 ITSN2Q9NZM3 1697 aa7.52□□□□□ -1.21
GABRB3-226ENST00000638149 HNRNPMP52272 730 aaKnown RBP eCLIP7.52□□□□□ -1.21
GABRB3-226ENST00000638149 ABCC1P33527 1531 aa7.52□□□□□ -1.21
GABRB3-226ENST00000638149 NPATQ14207 1427 aa7.52□□□□□ -1.21
GABRB3-226ENST00000638149 MED1Q15648 1581 aaPredicted RBP7.51□□□□□ -1.21
GABRB3-226ENST00000638149 CDC42BPBQ9Y5S2 1711 aa7.51□□□□□ -1.21
GABRB3-226ENST00000638149 PREX2Q70Z35 1606 aa7.51□□□□□ -1.21
GABRB3-226ENST00000638149 ARHGAP35Q9NRY4 1499 aa7.5□□□□□ -1.21
GABRB3-226ENST00000638149 MYO3AQ8NEV4 1616 aa7.5□□□□□ -1.21
GABRB3-226ENST00000638149 CFDP1Q9UEE9 299 aaPredicted RBP7.5□□□□□ -1.21
GABRB3-226ENST00000638149 MROH2AA6NES4 1674 aa7.5□□□□□ -1.21
GABRB3-226ENST00000638149 CEP170BQ9Y4F5 1589 aaPredicted RBP7.5□□□□□ -1.21
GABRB3-226ENST00000638149 KIDINS220Q9ULH0 1771 aa7.49□□□□□ -1.21
GABRB3-226ENST00000638149 CCDC18Q5T9S5 1454 aa7.49□□□□□ -1.21
GABRB3-226ENST00000638149 SYCP2Q9BX26 1530 aa7.48□□□□□ -1.21
GABRB3-226ENST00000638149 ANKLE2Q86XL3 938 aa7.48□□□□□ -1.21
GABRB3-226ENST00000638149 SAMD9LQ8IVG5 1584 aa7.48□□□□□ -1.21
GABRB3-226ENST00000638149 A2MP01023 1474 aa7.48□□□□□ -1.21
GABRB3-226ENST00000638149 PLA2R1Q13018 1463 aa7.48□□□□□ -1.21
GABRB3-226ENST00000638149 ATP7AQ04656 1500 aa7.47□□□□□ -1.21
GABRB3-226ENST00000638149 PTPRKQ15262 1439 aa7.47□□□□□ -1.21
GABRB3-226ENST00000638149 CPS1P31327 1500 aa7.47□□□□□ -1.21
GABRB3-226ENST00000638149 CCNB3Q8WWL7 1395 aa7.46□□□□□ -1.21
GABRB3-226ENST00000638149 THEMISQ8N1K5 641 aaPredicted RBP7.46□□□□□ -1.22
GABRB3-226ENST00000638149 SHANK2Q9UPX8 1470 aa7.46□□□□□ -1.22
GABRB3-226ENST00000638149 ZNF142P52746 1687 aaPredicted RBP7.46□□□□□ -1.22
GABRB3-226ENST00000638149 CDC42BPAQ5VT25 1732 aa7.46□□□□□ -1.22
GABRB3-226ENST00000638149 LRRIQ1Q96JM4 1722 aa7.46□□□□□ -1.22
GABRB3-226ENST00000638149 WASHC2CQ9Y4E1 1318 aa7.46□□□□□ -1.22
GABRB3-226ENST00000638149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.46□□□□□ -1.22
GABRB3-226ENST00000638149 A2ML1A8K2U0 1454 aa7.45□□□□□ -1.22
GABRB3-226ENST00000638149 TCOF1Q13428 1488 aaKnown RBP7.45□□□□□ -1.22
GABRB3-226ENST00000638149 PLEKHH2Q8IVE3 1493 aa7.45□□□□□ -1.22
GABRB3-226ENST00000638149 KIF3BO15066 747 aa7.45□□□□□ -1.22
GABRB3-226ENST00000638149 FBXO31Q5XUX0 539 aaPredicted RBP7.45□□□□□ -1.22
GABRB3-226ENST00000638149 TNRQ92752 1358 aa7.45□□□□□ -1.22
GABRB3-226ENST00000638149 CASKIN1Q8WXD9 1431 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms