RNA–Protein interactions for RNA: ENST00000637694.1

CNTNAP2-222, Transcript of contactin associated protein like 2, human

TSL 5

Gene CNTNAP2, Length 2,213 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP2-222	ENST00000637694	MRS2	Q9HD23	443 aa		11.59	□□□□□ -0.55
CNTNAP2-222	ENST00000637694	NUDC	Q9Y266	331 aa		11.59	□□□□□ -0.55
CNTNAP2-222	ENST00000637694	MS4A1	P11836	297 aa		11.59	□□□□□ -0.55
CNTNAP2-222	ENST00000637694	PNN	Q9H307	717 aa	Known RBP	11.58	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.58	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	CLCN1	P35523	988 aa		11.56	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	TOPBP1	Q92547	1522 aa		11.55	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	NCOA2	Q15596	1464 aa		11.54	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	FHAD1	B1AJZ9	1412 aa		11.54	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	CNTLN	Q9NXG0	1405 aa		11.54	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	SYNJ1	O43426	1573 aa		11.54	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	CALD1	Q05682	793 aa	Known RBP	11.54	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	POGK	Q9P215	609 aa		11.54	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	TONSL	Q96HA7	1378 aa		11.53	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	RGS3	P49796	1198 aa		11.52	□□□□□ -0.56
CNTNAP2-222	ENST00000637694	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.52	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	EXOC6	Q8TAG9	804 aa		11.52	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	OSCAR	Q8IYS5	282 aa		11.51	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	EIF4G3	O43432	1585 aa	Known RBP	11.5	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	SKAP1	Q86WV1	359 aa		11.5	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.5	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	HSPA5	P11021	654 aa	Known RBP	11.5	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	DNMBP	Q6XZF7	1577 aa		11.49	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	PDCL3	Q9H2J4	239 aa		11.49	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	IFT140	Q96RY7	1462 aa		11.49	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	KDM5B	Q9UGL1	1544 aa		11.48	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	PDIA4	P13667	645 aa	Known RBP	11.48	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	L1TD1	Q5T7N2	865 aa	Known RBP	11.48	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	RIMBP3C	A6NJZ7	1639 aa		11.47	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	RIMBP3B	A6NNM3	1639 aa		11.47	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	RIMBP3	Q9UFD9	1639 aa		11.47	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	AQR	O60306	1485 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	CHD1	O14646	1710 aa		11.47	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	TARBP1	Q13395	1621 aa	Known RBP	11.47	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	RRP1	P56182	461 aa	Known RBP	11.46	□□□□□ -0.57
CNTNAP2-222	ENST00000637694	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.46	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	RAD54L2	Q9Y4B4	1467 aa		11.46	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	SENP3-EIF4A1	A0A087X0R7	540 aa		11.45	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	XRCC6	P12956	609 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	PANK2	Q9BZ23	570 aa		11.44	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	POLA1	P09884	1462 aa	Predicted RBP	11.44	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	CCDC7	Q96M83	1385 aa		11.41	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	ARX	Q96QS3	562 aa		11.41	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	PHLDB1	Q86UU1	1377 aa		11.41	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	NCOA1	Q15788	1441 aa		11.41	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	ERICH3	Q5RHP9	1530 aa		11.41	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	FSD2	A1L4K1	749 aa		11.4	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	TPM2	P07951	284 aa		11.4	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	FAM50A	Q14320	339 aa	Known RBP	11.4	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	ERBB4	Q15303	1308 aa		11.4	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	ARHGEF11	O15085	1522 aa		11.4	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	FBLN2	P98095	1184 aa		11.4	□□□□□ -0.58
CNTNAP2-222	ENST00000637694	TDRD9	Q8NDG6	1382 aa	Known RBP	11.39	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	CUX1	P39880	1505 aa		11.39	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	C8orf34	Q49A92	452 aa		11.38	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	FGD5	Q6ZNL6	1462 aa		11.38	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	MAP3K1	Q13233	1512 aa		11.37	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	GOLGA6L3	A6NEY3	463 aa		11.37	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	ESPN	B1AK53	854 aa		11.37	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	GTF2E1	P29083	439 aa	Predicted RBP	11.36	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	BBX	Q8WY36	941 aa	Predicted RBP	11.36	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	RCAN3	Q9UKA8	241 aa		11.36	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	PRX	Q9BXM0	1461 aa		11.35	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	FAM161A	Q3B820	660 aa		11.35	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	ARHGAP35	Q9NRY4	1499 aa		11.34	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	TIAM1	Q13009	1591 aa		11.34	□□□□□ -0.59
CNTNAP2-222	ENST00000637694	SNAPC4	Q5SXM2	1469 aa		11.33	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	CYB5RL	Q6IPT4	315 aa		11.33	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	PNISR	Q8TF01	805 aa	Known RBP	11.33	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	KIF7	Q2M1P5	1343 aa		11.32	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	LRRC9	Q6ZRR7	1453 aa		11.32	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	RIPK4	P57078	832 aa		11.32	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	KIAA1211	Q6ZU35	1233 aa		11.32	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.32	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.32	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	UACA	Q9BZF9	1416 aa		11.32	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	KDM2B	Q8NHM5	1336 aa		11.31	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.31	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	STAC3	Q96MF2	364 aa		11.31	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	DHX29	Q7Z478	1369 aa	Known RBP	11.31	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	ABCA5	Q8WWZ7	1642 aa		11.3	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	CCDC18	Q5T9S5	1454 aa		11.3	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	PBRM1	Q86U86	1689 aa		11.3	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	PLIN1	O60240	522 aa		11.29	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	CNGB1	Q14028	1251 aa	Predicted RBP	11.29	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	CRBN	Q96SW2	442 aa		11.29	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	GZF1	Q9H116	711 aa	Predicted RBP	11.29	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	SLK	Q9H2G2	1235 aa	Predicted RBP	11.29	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	CHMP4B	Q9H444	224 aa	Known RBP	11.29	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	ANTXR1	Q9H6X2	564 aa		11.29	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	KTN1	Q86UP2	1357 aa	Known RBP	11.29	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	MYOM3	Q5VTT5	1437 aa		11.28	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	TAF7L	Q5H9L4	462 aa		11.28	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	USP19	O94966	1318 aa		11.28	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	MRE11	P49959	708 aa		11.28	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	MYH16	Q9H6N6	1097 aa		11.28	□□□□□ -0.6
CNTNAP2-222	ENST00000637694	LRPPRC	P42704	1394 aa	Known RBP	11.26	□□□□□ -0.61
CNTNAP2-222	ENST00000637694	GRPEL1	Q9HAV7	217 aa		11.25	□□□□□ -0.61
CNTNAP2-222	ENST00000637694	CLASP1	Q7Z460	1538 aa		11.25	□□□□□ -0.61

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