RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 FARP1Q9Y4F1 1045 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-244ENST00000637625 E2F4Q16254 413 aa20.33■□□□□ 0.85
CACNA1A-244ENST00000637625 TESPA1A2RU30 521 aaPredicted RBP20.33■□□□□ 0.84
CACNA1A-244ENST00000637625 ZNF579Q8NAF0 562 aaKnown RBP20.33■□□□□ 0.84
CACNA1A-244ENST00000637625 EFCAB3Q8N7B9 438 aa20.3■□□□□ 0.84
CACNA1A-244ENST00000637625 SLC24A3Q9HC58 644 aa20.3■□□□□ 0.84
CACNA1A-244ENST00000637625 EEA1Q15075 1411 aa20.28■□□□□ 0.84
CACNA1A-244ENST00000637625 IFNL1Q8IU54 200 aa20.28■□□□□ 0.84
CACNA1A-244ENST00000637625 PHF8Q9UPP1 1060 aa20.28■□□□□ 0.84
CACNA1A-244ENST00000637625 NCKAP5LQ9HCH0 1330 aa20.26■□□□□ 0.83
CACNA1A-244ENST00000637625 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
CACNA1A-244ENST00000637625 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
CACNA1A-244ENST00000637625 NEUROD2Q15784 382 aa20.23■□□□□ 0.83
CACNA1A-244ENST00000637625 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
CACNA1A-244ENST00000637625 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
CACNA1A-244ENST00000637625 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
CACNA1A-244ENST00000637625 PDS5BQ9NTI5 1447 aa20.18■□□□□ 0.82
CACNA1A-244ENST00000637625 NLRP6P59044 892 aa20.17■□□□□ 0.82
CACNA1A-244ENST00000637625 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
CACNA1A-244ENST00000637625 MAP3K13O43283 966 aa20.15■□□□□ 0.82
CACNA1A-244ENST00000637625 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-244ENST00000637625 ZMYND10O75800 440 aa20.13■□□□□ 0.81
CACNA1A-244ENST00000637625 SOX12O15370 315 aa20.11■□□□□ 0.81
CACNA1A-244ENST00000637625 KIF21BO75037 1637 aa20.11■□□□□ 0.81
CACNA1A-244ENST00000637625 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
CACNA1A-244ENST00000637625 MS4A4AQ96JQ5 239 aa20.11■□□□□ 0.81
CACNA1A-244ENST00000637625 LARP6Q9BRS8 491 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-244ENST00000637625 CUX2O14529 1486 aa20.09■□□□□ 0.81
CACNA1A-244ENST00000637625 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.8
CACNA1A-244ENST00000637625 KIF27Q86VH2 1401 aa20.08■□□□□ 0.8
CACNA1A-244ENST00000637625 PRKAR2AP13861 404 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-244ENST00000637625 KIF12Q96FN5 646 aa20.07■□□□□ 0.8
CACNA1A-244ENST00000637625 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
CACNA1A-244ENST00000637625 UBTFP17480 764 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-244ENST00000637625 MFSD10Q14728 455 aa20.05■□□□□ 0.8
CACNA1A-244ENST00000637625 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
CACNA1A-244ENST00000637625 CRISPLD2Q9H0B8 497 aa20.03■□□□□ 0.8
CACNA1A-244ENST00000637625 TNIKQ9UKE5 1360 aa19.99■□□□□ 0.79
CACNA1A-244ENST00000637625 HOMEZQ8IX15 550 aa19.99■□□□□ 0.79
CACNA1A-244ENST00000637625 CEP162Q5TB80 1403 aa19.99■□□□□ 0.79
CACNA1A-244ENST00000637625 DAXXQ9UER7 740 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-244ENST00000637625 ARIH1Q9Y4X5 557 aaPredicted RBP19.98■□□□□ 0.79
CACNA1A-244ENST00000637625 MRC2Q9UBG0 1479 aa19.97■□□□□ 0.79
CACNA1A-244ENST00000637625 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
CACNA1A-244ENST00000637625 PRXQ9BXM0 1461 aa19.95■□□□□ 0.78
CACNA1A-244ENST00000637625 ABCA10Q8WWZ4 1543 aa19.95■□□□□ 0.78
CACNA1A-244ENST00000637625 BARGINQ6ZT62 677 aa19.94■□□□□ 0.78
CACNA1A-244ENST00000637625 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
CACNA1A-244ENST00000637625 PDE4AP27815 886 aa19.94■□□□□ 0.78
CACNA1A-244ENST00000637625 DDX27Q96GQ7 796 aaKnown RBP19.93■□□□□ 0.78
CACNA1A-244ENST00000637625 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
CACNA1A-244ENST00000637625 CAMK2BQ13554 666 aa19.92■□□□□ 0.78
CACNA1A-244ENST00000637625 FXR2P51116 673 aaKnown RBP eCLIP19.92■□□□□ 0.78
CACNA1A-244ENST00000637625 GPBP1L1Q9HC44 474 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-244ENST00000637625 MLLT3P42568 568 aaPredicted RBP19.89■□□□□ 0.77
CACNA1A-244ENST00000637625 RBM26Q5T8P6 1007 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-244ENST00000637625 IGF1RP08069 1367 aa19.88■□□□□ 0.77
CACNA1A-244ENST00000637625 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-244ENST00000637625 SMYD5Q6GMV2 418 aa19.86■□□□□ 0.77
CACNA1A-244ENST00000637625 WDR62O43379 1518 aa19.86■□□□□ 0.77
CACNA1A-244ENST00000637625 TARBP1Q13395 1621 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-244ENST00000637625 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-244ENST00000637625 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
CACNA1A-244ENST00000637625 PAK3O75914 559 aaPredicted RBP19.84■□□□□ 0.77
CACNA1A-244ENST00000637625 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
CACNA1A-244ENST00000637625 CARMIL1Q5VZK9 1371 aa19.81■□□□□ 0.76
CACNA1A-244ENST00000637625 CLIP1P30622 1438 aa19.8■□□□□ 0.76
CACNA1A-244ENST00000637625 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
CACNA1A-244ENST00000637625 CUL7Q14999 1698 aa19.77■□□□□ 0.76
CACNA1A-244ENST00000637625 PHF12Q96QT6 1004 aa19.76■□□□□ 0.75
CACNA1A-244ENST00000637625 TRPC6Q9Y210 931 aa19.76■□□□□ 0.75
CACNA1A-244ENST00000637625 PPARGC1BQ86YN6 1023 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-244ENST00000637625 AK7Q96M32 723 aa19.75■□□□□ 0.75
CACNA1A-244ENST00000637625 PBRM1Q86U86 1689 aa19.75■□□□□ 0.75
CACNA1A-244ENST00000637625 GPIHBP1Q8IV16 184 aa19.74■□□□□ 0.75
CACNA1A-244ENST00000637625 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
CACNA1A-244ENST00000637625 AQRO60306 1485 aaKnown RBP eCLIP19.71■□□□□ 0.75
CACNA1A-244ENST00000637625 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
CACNA1A-244ENST00000637625 IL27Q8NEV9 243 aa19.7■□□□□ 0.74
CACNA1A-244ENST00000637625 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-244ENST00000637625 TMEM106CQ9BVX2 250 aa19.68■□□□□ 0.74
CACNA1A-244ENST00000637625 ZRANB1Q9UGI0 708 aa19.68■□□□□ 0.74
CACNA1A-244ENST00000637625 KDM4CQ9H3R0 1056 aa19.67■□□□□ 0.74
CACNA1A-244ENST00000637625 EMILIN3Q9NT22 766 aa19.66■□□□□ 0.74
CACNA1A-244ENST00000637625 PPP1R15BQ5SWA1 713 aa19.65■□□□□ 0.74
CACNA1A-244ENST00000637625 PIP4P2Q8N4L2 257 aa19.65■□□□□ 0.74
CACNA1A-244ENST00000637625 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-244ENST00000637625 CTTNBP2Q8WZ74 1663 aa19.63■□□□□ 0.73
CACNA1A-244ENST00000637625 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
CACNA1A-244ENST00000637625 TTBK1Q5TCY1 1321 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-244ENST00000637625 TRIM66O15016 1216 aa19.62■□□□□ 0.73
CACNA1A-244ENST00000637625 DPYSL4O14531 572 aa19.62■□□□□ 0.73
CACNA1A-244ENST00000637625 KRI1Q8N9T8 703 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-244ENST00000637625 GPHNQ9NQX3 736 aaPredicted RBP19.61■□□□□ 0.73
CACNA1A-244ENST00000637625 VPS8Q8N3P4 1428 aa19.61■□□□□ 0.73
CACNA1A-244ENST00000637625 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
CACNA1A-244ENST00000637625 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
CACNA1A-244ENST00000637625 TRIM26Q12899 539 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-244ENST00000637625 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
CACNA1A-244ENST00000637625 ARHGAP35Q9NRY4 1499 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms