RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 CHIC1Q5VXU3 224 aa38.11■■■■□ 3.69
CACNA1A-244ENST00000637625 AEBP2Q6ZN18 517 aaPredicted RBP37.79■■■■□ 3.64
CACNA1A-244ENST00000637625 PHF23Q9BUL5 403 aaPredicted RBP33.91■■■■□ 3.02
CACNA1A-244ENST00000637625 PLPPR3Q6T4P5 718 aa31.49■■■□□ 2.63
CACNA1A-244ENST00000637625 SENP3Q9H4L4 574 aaPredicted RBP31.44■■■□□ 2.62
CACNA1A-244ENST00000637625 ADRA2BP18089 450 aa29.81■■■□□ 2.36
CACNA1A-244ENST00000637625 PPP6R1Q9UPN7 881 aa29.47■■■□□ 2.31
CACNA1A-244ENST00000637625 KCNA4P22459 653 aa29.25■■■□□ 2.27
CACNA1A-244ENST00000637625 FOXD1Q16676 465 aa29.25■■■□□ 2.27
CACNA1A-244ENST00000637625 EHMT2Q96KQ7 1210 aa29.02■■■□□ 2.24
CACNA1A-244ENST00000637625 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
CACNA1A-244ENST00000637625 PPP4R3CPQ6ZMV5 832 aa28.04■■■□□ 2.08
CACNA1A-244ENST00000637625 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
CACNA1A-244ENST00000637625 SLC4A1APQ9BWU0 796 aaKnown RBP27.93■■■□□ 2.06
CACNA1A-244ENST00000637625 PIAS4Q8N2W9 510 aaPredicted RBP27.83■■■□□ 2.05
CACNA1A-244ENST00000637625 NCBP3Q53F19 620 aaKnown RBP27.47■■□□□ 1.99
CACNA1A-244ENST00000637625 NPM3O75607 178 aaKnown RBP27.42■■□□□ 1.98
CACNA1A-244ENST00000637625 ZBTB22O15209 634 aa27.1■■□□□ 1.93
CACNA1A-244ENST00000637625 CNKSR2Q8WXI2 1034 aa26.82■■□□□ 1.88
CACNA1A-244ENST00000637625 SCAF1Q9H7N4 1312 aaKnown RBP26.48■■□□□ 1.83
CACNA1A-244ENST00000637625 MAPK8IP2Q13387 824 aaPredicted RBP26.33■■□□□ 1.81
CACNA1A-244ENST00000637625 FOXD4L1Q9NU39 408 aa26.28■■□□□ 1.8
CACNA1A-244ENST00000637625 DNAJC5BQ9UF47 199 aa26.23■■□□□ 1.79
CACNA1A-244ENST00000637625 MSH5O43196 834 aa26.08■■□□□ 1.77
CACNA1A-244ENST00000637625 RNF216Q9NWF9 866 aaPredicted RBP25.95■■□□□ 1.74
CACNA1A-244ENST00000637625 RTN4Q9NQC3 1192 aaKnown RBP25.69■■□□□ 1.7
CACNA1A-244ENST00000637625 SLC4A2P04920 1241 aa25.62■■□□□ 1.69
CACNA1A-244ENST00000637625 HOXD11P31277 338 aaPredicted RBP25.51■■□□□ 1.67
CACNA1A-244ENST00000637625 SLC24A1O60721 1099 aa25.46■■□□□ 1.67
CACNA1A-244ENST00000637625 DMRT2Q9Y5R5 561 aa25.43■■□□□ 1.66
CACNA1A-244ENST00000637625 AMER1Q5JTC6 1135 aaPredicted RBP25.36■■□□□ 1.65
CACNA1A-244ENST00000637625 FKBP8Q14318 412 aa25.13■■□□□ 1.61
CACNA1A-244ENST00000637625 MYCNP04198 464 aaPredicted RBP25.11■■□□□ 1.61
CACNA1A-244ENST00000637625 ATXN8OSP0DMR3 200 aa25.11■■□□□ 1.61
CACNA1A-244ENST00000637625 ATF5Q9Y2D1 282 aaPredicted RBP24.69■■□□□ 1.54
CACNA1A-244ENST00000637625 CCDC180Q9P1Z9 1646 aa24.55■■□□□ 1.52
CACNA1A-244ENST00000637625 DCAF8L1A6NGE4 600 aa24.21■■□□□ 1.47
CACNA1A-244ENST00000637625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.2■■□□□ 1.46
CACNA1A-244ENST00000637625 U3KPZ7 1027 aaPredicted RBP24.19■■□□□ 1.46
CACNA1A-244ENST00000637625 SAMD1Q6SPF0 538 aaPredicted RBP24.08■■□□□ 1.45
CACNA1A-244ENST00000637625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
CACNA1A-244ENST00000637625 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
CACNA1A-244ENST00000637625 ZNF219Q9P2Y4 722 aaPredicted RBP23.84■■□□□ 1.41
CACNA1A-244ENST00000637625 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
CACNA1A-244ENST00000637625 MKRN4PQ13434 485 aaPredicted RBP23.63■■□□□ 1.37
CACNA1A-244ENST00000637625 SPDYE4A6NLX3 237 aa23.61■■□□□ 1.37
CACNA1A-244ENST00000637625 FBXO3Q9UK99 471 aa23.56■■□□□ 1.36
CACNA1A-244ENST00000637625 PROM2Q8N271 834 aa23.53■■□□□ 1.36
CACNA1A-244ENST00000637625 PLCB2Q00722 1185 aa23.49■■□□□ 1.35
CACNA1A-244ENST00000637625 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
CACNA1A-244ENST00000637625 VASPP50552 380 aaPredicted RBP23.42■■□□□ 1.34
CACNA1A-244ENST00000637625 IFNLR1Q8IU57 520 aaPredicted RBP23.36■■□□□ 1.33
CACNA1A-244ENST00000637625 ABCC9O60706 1549 aa23.3■■□□□ 1.32
CACNA1A-244ENST00000637625 SHROOM4Q9ULL8 1493 aa23.27■■□□□ 1.32
CACNA1A-244ENST00000637625 APLP2Q06481 763 aa23.26■■□□□ 1.31
CACNA1A-244ENST00000637625 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
CACNA1A-244ENST00000637625 PKD2Q13563 968 aa23.17■■□□□ 1.3
CACNA1A-244ENST00000637625 SPINK5Q9NQ38 1064 aaPredicted RBP23.14■■□□□ 1.29
CACNA1A-244ENST00000637625 HAP1P54257 671 aaPredicted RBP23.11■■□□□ 1.29
CACNA1A-244ENST00000637625 FBLN2P98095 1184 aa23.08■■□□□ 1.29
CACNA1A-244ENST00000637625 POLA2Q14181 598 aa23.06■■□□□ 1.28
CACNA1A-244ENST00000637625 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
CACNA1A-244ENST00000637625 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
CACNA1A-244ENST00000637625 PRKCSHP14314 528 aaPredicted RBP22.83■■□□□ 1.25
CACNA1A-244ENST00000637625 NACADO15069 1562 aa22.81■■□□□ 1.24
CACNA1A-244ENST00000637625 BCANQ96GW7 911 aa22.75■■□□□ 1.23
CACNA1A-244ENST00000637625 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
CACNA1A-244ENST00000637625 CAPN15O75808 1086 aa22.75■■□□□ 1.23
CACNA1A-244ENST00000637625 VSIG10Q8N0Z9 540 aa22.73■■□□□ 1.23
CACNA1A-244ENST00000637625 NPM1P06748 294 aaKnown RBP eCLIP22.7■■□□□ 1.22
CACNA1A-244ENST00000637625 RNF39Q9H2S5 420 aa22.69■■□□□ 1.22
CACNA1A-244ENST00000637625 KDM2AQ9Y2K7 1162 aa22.67■■□□□ 1.22
CACNA1A-244ENST00000637625 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
CACNA1A-244ENST00000637625 TAOK2Q9UL54 1235 aa22.63■■□□□ 1.21
CACNA1A-244ENST00000637625 ABCB7O75027 752 aa22.6■■□□□ 1.21
CACNA1A-244ENST00000637625 SPOCK2Q92563 424 aa22.58■■□□□ 1.2
CACNA1A-244ENST00000637625 ECM2O94769 699 aaPredicted RBP22.55■■□□□ 1.2
CACNA1A-244ENST00000637625 BBXQ8WY36 941 aaPredicted RBP22.54■■□□□ 1.2
CACNA1A-244ENST00000637625 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
CACNA1A-244ENST00000637625 PAXIP1Q6ZW49 1069 aaPredicted RBP22.47■■□□□ 1.19
CACNA1A-244ENST00000637625 RGL2O15211 777 aa22.47■■□□□ 1.19
CACNA1A-244ENST00000637625 ZBTB12Q9Y330 459 aaPredicted RBP22.47■■□□□ 1.19
CACNA1A-244ENST00000637625 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.44■■□□□ 1.18
CACNA1A-244ENST00000637625 CFAP44Q96MT7 982 aa22.41■■□□□ 1.18
CACNA1A-244ENST00000637625 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
CACNA1A-244ENST00000637625 ZNF692Q9BU19 519 aaPredicted RBP22.35■■□□□ 1.17
CACNA1A-244ENST00000637625 C1QBPQ07021 282 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-244ENST00000637625 UNC13AQ9UPW8 1703 aa22.33■■□□□ 1.17
CACNA1A-244ENST00000637625 TPRNQ4KMQ1 711 aa22.29■■□□□ 1.16
CACNA1A-244ENST00000637625 STAG3Q9UJ98 1225 aa22.29■■□□□ 1.16
CACNA1A-244ENST00000637625 OSCARQ8IYS5 282 aa22.28■■□□□ 1.16
CACNA1A-244ENST00000637625 PLCD3Q8N3E9 789 aa22.27■■□□□ 1.16
CACNA1A-244ENST00000637625 SSUH2Q9Y2M2 353 aa22.27■■□□□ 1.16
CACNA1A-244ENST00000637625 TSHZ2Q9NRE2 1034 aa22.26■■□□□ 1.15
CACNA1A-244ENST00000637625 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
CACNA1A-244ENST00000637625 MIER1Q8N108 512 aa22.16■■□□□ 1.14
CACNA1A-244ENST00000637625 SPRYD3Q8NCJ5 442 aa22.16■■□□□ 1.14
CACNA1A-244ENST00000637625 SPDYE2BA6NHP3 402 aa22.14■■□□□ 1.13
CACNA1A-244ENST00000637625 SPDYE6P0CI01 402 aa22.14■■□□□ 1.13
CACNA1A-244ENST00000637625 SPDYE2Q495Y8 402 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms