RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 NBPF8Q3BBV2 869 aa11.4□□□□□ -0.58
CHD2-226ENST00000636881 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.58
CHD2-226ENST00000636881 USP35Q9P2H5 1018 aa11.4□□□□□ -0.58
CHD2-226ENST00000636881 EHBP1L1Q8N3D4 1523 aa11.39□□□□□ -0.59
CHD2-226ENST00000636881 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
CHD2-226ENST00000636881 PPM1GO15355 546 aaPredicted RBP11.39□□□□□ -0.59
CHD2-226ENST00000636881 DENND4BO75064 1496 aaPredicted RBP11.39□□□□□ -0.59
CHD2-226ENST00000636881 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
CHD2-226ENST00000636881 CADPSQ9ULU8 1353 aa11.38□□□□□ -0.59
CHD2-226ENST00000636881 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
CHD2-226ENST00000636881 POLR1AO95602 1720 aaPredicted RBP11.38□□□□□ -0.59
CHD2-226ENST00000636881 ABCA5Q8WWZ7 1642 aa11.37□□□□□ -0.59
CHD2-226ENST00000636881 PDE4AP27815 886 aa11.37□□□□□ -0.59
CHD2-226ENST00000636881 KDM6BO15054 1643 aa11.36□□□□□ -0.59
CHD2-226ENST00000636881 LRRIQ1Q96JM4 1722 aa11.36□□□□□ -0.59
CHD2-226ENST00000636881 CUL7Q14999 1698 aa11.36□□□□□ -0.59
CHD2-226ENST00000636881 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
CHD2-226ENST00000636881 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
CHD2-226ENST00000636881 CC2D2AQ9P2K1 1620 aa11.35□□□□□ -0.59
CHD2-226ENST00000636881 EXOC6Q8TAG9 804 aa11.35□□□□□ -0.59
CHD2-226ENST00000636881 RRP1P56182 461 aaKnown RBP11.35□□□□□ -0.59
CHD2-226ENST00000636881 RPRD2Q5VT52 1461 aaKnown RBP11.34□□□□□ -0.59
CHD2-226ENST00000636881 GRIN2BQ13224 1484 aa11.34□□□□□ -0.59
CHD2-226ENST00000636881 ZNF326Q5BKZ1 582 aaKnown RBP11.34□□□□□ -0.59
CHD2-226ENST00000636881 SPATA31E1Q6ZUB1 1445 aa11.34□□□□□ -0.59
CHD2-226ENST00000636881 DHX29Q7Z478 1369 aaKnown RBP11.34□□□□□ -0.59
CHD2-226ENST00000636881 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
CHD2-226ENST00000636881 PNISRQ8TF01 805 aaKnown RBP11.33□□□□□ -0.6
CHD2-226ENST00000636881 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
CHD2-226ENST00000636881 TCOF1Q13428 1488 aaKnown RBP11.33□□□□□ -0.6
CHD2-226ENST00000636881 ANKRD30BQ9BXX2 1392 aa11.33□□□□□ -0.6
CHD2-226ENST00000636881 BACH2Q9BYV9 841 aa11.32□□□□□ -0.6
CHD2-226ENST00000636881 ABCA10Q8WWZ4 1543 aa11.32□□□□□ -0.6
CHD2-226ENST00000636881 TEX14Q8IWB6 1497 aa11.32□□□□□ -0.6
CHD2-226ENST00000636881 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
CHD2-226ENST00000636881 WASHC2CQ9Y4E1 1318 aa11.32□□□□□ -0.6
CHD2-226ENST00000636881 MS4A1P11836 297 aa11.32□□□□□ -0.6
CHD2-226ENST00000636881 MIA2Q96PC5 1412 aa11.31□□□□□ -0.6
CHD2-226ENST00000636881 RCAN3Q9UKA8 241 aa11.31□□□□□ -0.6
CHD2-226ENST00000636881 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
CHD2-226ENST00000636881 SAMD9Q5K651 1589 aa11.3□□□□□ -0.6
CHD2-226ENST00000636881 USP47Q96K76 1375 aa11.3□□□□□ -0.6
CHD2-226ENST00000636881 FANCD2Q9BXW9 1451 aa11.29□□□□□ -0.6
CHD2-226ENST00000636881 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
CHD2-226ENST00000636881 GSE1Q14687 1217 aa11.29□□□□□ -0.6
CHD2-226ENST00000636881 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
CHD2-226ENST00000636881 MAGI3Q5TCQ9 1506 aa11.29□□□□□ -0.6
CHD2-226ENST00000636881 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
CHD2-226ENST00000636881 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
CHD2-226ENST00000636881 EIF5BO60841 1220 aaKnown RBP11.27□□□□□ -0.6
CHD2-226ENST00000636881 ROCK2O75116 1388 aaKnown RBP11.27□□□□□ -0.61
CHD2-226ENST00000636881 ARID4BQ4LE39 1312 aaPredicted RBP11.26□□□□□ -0.61
CHD2-226ENST00000636881 KIF15Q9NS87 1388 aa11.26□□□□□ -0.61
CHD2-226ENST00000636881 ARID3CA6NKF2 412 aa11.26□□□□□ -0.61
CHD2-226ENST00000636881 BCORL1Q5H9F3 1711 aa11.26□□□□□ -0.61
CHD2-226ENST00000636881 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
CHD2-226ENST00000636881 MYBBP1AQ9BQG0 1328 aaKnown RBP11.25□□□□□ -0.61
CHD2-226ENST00000636881 NFKBIBQ15653 356 aa11.25□□□□□ -0.61
CHD2-226ENST00000636881 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
CHD2-226ENST00000636881 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
CHD2-226ENST00000636881 LRPPRCP42704 1394 aaKnown RBP11.24□□□□□ -0.61
CHD2-226ENST00000636881 RALBP1Q15311 655 aa11.23□□□□□ -0.61
CHD2-226ENST00000636881 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
CHD2-226ENST00000636881 FRAT1Q92837 279 aaPredicted RBP11.23□□□□□ -0.61
CHD2-226ENST00000636881 DAPK1P53355 1430 aa11.23□□□□□ -0.61
CHD2-226ENST00000636881 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
CHD2-226ENST00000636881 UBE2Q2Q8WVN8 375 aa11.22□□□□□ -0.61
CHD2-226ENST00000636881 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
CHD2-226ENST00000636881 CARD11Q9BXL7 1154 aa11.21□□□□□ -0.61
CHD2-226ENST00000636881 PLIN1O60240 522 aa11.21□□□□□ -0.62
CHD2-226ENST00000636881 EPRSP07814 1512 aaKnown RBP11.21□□□□□ -0.62
CHD2-226ENST00000636881 SKAP1Q86WV1 359 aa11.21□□□□□ -0.62
CHD2-226ENST00000636881 CRBNQ96SW2 442 aa11.21□□□□□ -0.62
CHD2-226ENST00000636881 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
CHD2-226ENST00000636881 NESP48681 1621 aa11.2□□□□□ -0.62
CHD2-226ENST00000636881 KDM5CP41229 1560 aa11.2□□□□□ -0.62
CHD2-226ENST00000636881 KTN1Q86UP2 1357 aaKnown RBP11.2□□□□□ -0.62
CHD2-226ENST00000636881 KIF14Q15058 1648 aa11.2□□□□□ -0.62
CHD2-226ENST00000636881 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
CHD2-226ENST00000636881 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
CHD2-226ENST00000636881 ABCC5O15440 1437 aa11.18□□□□□ -0.62
CHD2-226ENST00000636881 MBD5Q9P267 1494 aa11.18□□□□□ -0.62
CHD2-226ENST00000636881 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
CHD2-226ENST00000636881 DNMT1P26358 1616 aaKnown RBP11.17□□□□□ -0.62
CHD2-226ENST00000636881 PKD2Q13563 968 aa11.17□□□□□ -0.62
CHD2-226ENST00000636881 ZNF644Q9H582 1327 aaPredicted RBP11.17□□□□□ -0.62
CHD2-226ENST00000636881 KIAA1107Q9UPP5 1409 aa11.17□□□□□ -0.62
CHD2-226ENST00000636881 GAPVD1Q14C86 1478 aa11.17□□□□□ -0.62
CHD2-226ENST00000636881 PZPP20742 1482 aa11.17□□□□□ -0.62
CHD2-226ENST00000636881 ST20-MTHFSA0A0A6YYL1 179 aa11.16□□□□□ -0.62
CHD2-226ENST00000636881 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
CHD2-226ENST00000636881 RALGAPBQ86X10 1494 aa11.14□□□□□ -0.63
CHD2-226ENST00000636881 FAM161AQ3B820 660 aa11.14□□□□□ -0.63
CHD2-226ENST00000636881 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
CHD2-226ENST00000636881 LAMC3Q9Y6N6 1575 aa11.14□□□□□ -0.63
CHD2-226ENST00000636881 FRAT2O75474 233 aaPredicted RBP11.13□□□□□ -0.63
CHD2-226ENST00000636881 CENPQQ7L2Z9 268 aaPredicted RBP11.13□□□□□ -0.63
CHD2-226ENST00000636881 FAM43AQ8N2R8 423 aa11.13□□□□□ -0.63
CHD2-226ENST00000636881 WDR62O43379 1518 aa11.11□□□□□ -0.63
CHD2-226ENST00000636881 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms