RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 CAMSAP2Q08AD1 1489 aa10.04□□□□□ -0.8
GABRB3-221ENST00000636690 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
GABRB3-221ENST00000636690 PLB1Q6P1J6 1458 aa10.03□□□□□ -0.8
GABRB3-221ENST00000636690 ABCC10Q5T3U5 1492 aa10.02□□□□□ -0.81
GABRB3-221ENST00000636690 KDM5BQ9UGL1 1544 aa10.02□□□□□ -0.81
GABRB3-221ENST00000636690 SIN3AQ96ST3 1273 aa10.01□□□□□ -0.81
GABRB3-221ENST00000636690 ARHGEF5Q12774 1597 aa10.01□□□□□ -0.81
GABRB3-221ENST00000636690 DENND4BO75064 1496 aaPredicted RBP10□□□□□ -0.81
GABRB3-221ENST00000636690 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
GABRB3-221ENST00000636690 PRG4Q92954 1404 aaPredicted RBP9.99□□□□□ -0.81
GABRB3-221ENST00000636690 ATP10BO94823 1461 aa9.99□□□□□ -0.81
GABRB3-221ENST00000636690 RPRD2Q5VT52 1461 aaKnown RBP9.99□□□□□ -0.81
GABRB3-221ENST00000636690 KDM5DQ9BY66 1539 aa9.99□□□□□ -0.81
GABRB3-221ENST00000636690 RSPH4AQ5TD94 716 aa9.99□□□□□ -0.81
GABRB3-221ENST00000636690 ANKRD30AQ9BXX3 1397 aa9.99□□□□□ -0.81
GABRB3-221ENST00000636690 PLEKHD1A6NEE1 506 aa9.98□□□□□ -0.81
GABRB3-221ENST00000636690 CFDP1Q9UEE9 299 aaPredicted RBP9.98□□□□□ -0.81
GABRB3-221ENST00000636690 ANKRD30BQ9BXX2 1392 aa9.98□□□□□ -0.81
GABRB3-221ENST00000636690 PTPRGP23470 1445 aa9.98□□□□□ -0.81
GABRB3-221ENST00000636690 CDC42BPAQ5VT25 1732 aa9.97□□□□□ -0.81
GABRB3-221ENST00000636690 CCER2I3L3R5 266 aa9.97□□□□□ -0.81
GABRB3-221ENST00000636690 MPHOSPH9Q99550 1183 aa9.97□□□□□ -0.81
GABRB3-221ENST00000636690 KDM6BO15054 1643 aa9.96□□□□□ -0.81
GABRB3-221ENST00000636690 RRP7BPQ9NSQ0 103 aa9.96□□□□□ -0.82
GABRB3-221ENST00000636690 GTF3C3Q9Y5Q9 886 aa9.96□□□□□ -0.82
GABRB3-221ENST00000636690 PLEKHH2Q8IVE3 1493 aa9.95□□□□□ -0.82
GABRB3-221ENST00000636690 TEX14Q8IWB6 1497 aa9.95□□□□□ -0.82
GABRB3-221ENST00000636690 CHD1O14646 1710 aa9.94□□□□□ -0.82
GABRB3-221ENST00000636690 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
GABRB3-221ENST00000636690 MAST1Q9Y2H9 1570 aa9.94□□□□□ -0.82
GABRB3-221ENST00000636690 UHRF1BP1LA0JNW5 1464 aa9.94□□□□□ -0.82
GABRB3-221ENST00000636690 ABCC2Q92887 1545 aa9.93□□□□□ -0.82
GABRB3-221ENST00000636690 PZPP20742 1482 aa9.93□□□□□ -0.82
GABRB3-221ENST00000636690 C9orf84Q5VXU9 1444 aa9.93□□□□□ -0.82
GABRB3-221ENST00000636690 KIAA1107Q9UPP5 1409 aa9.93□□□□□ -0.82
GABRB3-221ENST00000636690 FBLN2P98095 1184 aa9.93□□□□□ -0.82
GABRB3-221ENST00000636690 TRIM52Q96A61 297 aa9.93□□□□□ -0.82
GABRB3-221ENST00000636690 ANKRD50Q9ULJ7 1429 aa9.92□□□□□ -0.82
GABRB3-221ENST00000636690 CHIC2Q9UKJ5 165 aa9.92□□□□□ -0.82
GABRB3-221ENST00000636690 ARHGEF12Q9NZN5 1544 aa9.92□□□□□ -0.82
GABRB3-221ENST00000636690 CCDC141Q6ZP82 1450 aa9.91□□□□□ -0.82
GABRB3-221ENST00000636690 CLASP1Q7Z460 1538 aa9.91□□□□□ -0.82
GABRB3-221ENST00000636690 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
GABRB3-221ENST00000636690 ANP32CO43423 234 aa9.9□□□□□ -0.82
GABRB3-221ENST00000636690 ARAP3Q8WWN8 1544 aa9.9□□□□□ -0.82
GABRB3-221ENST00000636690 PLXNC1O60486 1568 aa9.89□□□□□ -0.83
GABRB3-221ENST00000636690 ZNF644Q9H582 1327 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-221ENST00000636690 EIF4G2P78344 907 aaKnown RBP eCLIP9.89□□□□□ -0.83
GABRB3-221ENST00000636690 YTHDC1Q96MU7 727 aaKnown RBP9.89□□□□□ -0.83
GABRB3-221ENST00000636690 SLC4A1APQ9BWU0 796 aaKnown RBP9.89□□□□□ -0.83
GABRB3-221ENST00000636690 POLR1AO95602 1720 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-221ENST00000636690 TSPY4P0CV99 314 aa9.88□□□□□ -0.83
GABRB3-221ENST00000636690 TSPY10P0CW01 314 aa9.88□□□□□ -0.83
GABRB3-221ENST00000636690 PLPPR3Q6T4P5 718 aa9.88□□□□□ -0.83
GABRB3-221ENST00000636690 UHRF1BP1Q6BDS2 1440 aa9.88□□□□□ -0.83
GABRB3-221ENST00000636690 ARID4BQ4LE39 1312 aaPredicted RBP9.87□□□□□ -0.83
GABRB3-221ENST00000636690 SAMD9LQ8IVG5 1584 aa9.87□□□□□ -0.83
GABRB3-221ENST00000636690 CDC42BPBQ9Y5S2 1711 aa9.87□□□□□ -0.83
GABRB3-221ENST00000636690 DDX10Q13206 875 aaKnown RBP9.86□□□□□ -0.83
GABRB3-221ENST00000636690 SPATA31E1Q6ZUB1 1445 aa9.86□□□□□ -0.83
GABRB3-221ENST00000636690 L3MBTL2Q969R5 705 aa9.86□□□□□ -0.83
GABRB3-221ENST00000636690 KIF15Q9NS87 1388 aa9.86□□□□□ -0.83
GABRB3-221ENST00000636690 MYO5CQ9NQX4 1742 aa9.85□□□□□ -0.83
GABRB3-221ENST00000636690 UNC13BO14795 1591 aa9.85□□□□□ -0.83
GABRB3-221ENST00000636690 ARID3CA6NKF2 412 aa9.85□□□□□ -0.83
GABRB3-221ENST00000636690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.85□□□□□ -0.83
GABRB3-221ENST00000636690 CNTLNQ9NXG0 1405 aa9.84□□□□□ -0.83
GABRB3-221ENST00000636690 ERBINQ96RT1 1412 aa9.83□□□□□ -0.84
GABRB3-221ENST00000636690 MAGI2Q86UL8 1455 aa9.83□□□□□ -0.84
GABRB3-221ENST00000636690 RALGAPBQ86X10 1494 aa9.83□□□□□ -0.84
GABRB3-221ENST00000636690 PLCH2O75038 1416 aa9.82□□□□□ -0.84
GABRB3-221ENST00000636690 DUOX2Q9NRD8 1548 aa9.82□□□□□ -0.84
GABRB3-221ENST00000636690 HSPA5P11021 654 aaKnown RBP9.82□□□□□ -0.84
GABRB3-221ENST00000636690 ATP10AO60312 1499 aa9.82□□□□□ -0.84
GABRB3-221ENST00000636690 TTC37Q6PGP7 1564 aa9.82□□□□□ -0.84
GABRB3-221ENST00000636690 ARHGAP5Q13017 1502 aa9.82□□□□□ -0.84
GABRB3-221ENST00000636690 ROCK2O75116 1388 aaKnown RBP9.81□□□□□ -0.84
GABRB3-221ENST00000636690 NUP155O75694 1391 aa9.81□□□□□ -0.84
GABRB3-221ENST00000636690 CCDC7Q96M83 1385 aa9.81□□□□□ -0.84
GABRB3-221ENST00000636690 IQGAP3Q86VI3 1631 aa9.81□□□□□ -0.84
GABRB3-221ENST00000636690 FAM135AQ9P2D6 1515 aa9.81□□□□□ -0.84
GABRB3-221ENST00000636690 RTEL1-TNFRSF6BF6WH68 1400 aa9.81□□□□□ -0.84
GABRB3-221ENST00000636690 WDR7Q9Y4E6 1490 aa9.8□□□□□ -0.84
GABRB3-221ENST00000636690 ZNF777Q9ULD5 760 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-221ENST00000636690 ZCCHC11Q5TAX3 1644 aaKnown RBP9.8□□□□□ -0.84
GABRB3-221ENST00000636690 SYCP2Q9BX26 1530 aa9.8□□□□□ -0.84
GABRB3-221ENST00000636690 WASHC2AQ641Q2 1341 aa9.8□□□□□ -0.84
GABRB3-221ENST00000636690 ABCC1P33527 1531 aa9.79□□□□□ -0.84
GABRB3-221ENST00000636690 PKD2Q13563 968 aa9.79□□□□□ -0.84
GABRB3-221ENST00000636690 LAMC1P11047 1609 aa9.78□□□□□ -0.84
GABRB3-221ENST00000636690 KDM5CP41229 1560 aa9.78□□□□□ -0.84
GABRB3-221ENST00000636690 KTN1Q86UP2 1357 aaKnown RBP9.76□□□□□ -0.85
GABRB3-221ENST00000636690 EIF2AK4Q9P2K8 1649 aaKnown RBP9.76□□□□□ -0.85
GABRB3-221ENST00000636690 NBPF8Q3BBV2 869 aa9.76□□□□□ -0.85
GABRB3-221ENST00000636690 EFCAB2Q5VUJ9 269 aa9.76□□□□□ -0.85
GABRB3-221ENST00000636690 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
GABRB3-221ENST00000636690 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
GABRB3-221ENST00000636690 NEURL4Q96JN8 1562 aa9.75□□□□□ -0.85
GABRB3-221ENST00000636690 FOXD1Q16676 465 aa9.75□□□□□ -0.85
GABRB3-221ENST00000636690 USP47Q96K76 1375 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms