RNA–Protein interactions for RNA: ENST00000635966.1

LINC00598-209, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,148 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-209ENST00000635966 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
LINC00598-209ENST00000635966 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
LINC00598-209ENST00000635966 CFTRP13569 1480 aa11.79□□□□□ -0.52
LINC00598-209ENST00000635966 SOX12O15370 315 aa11.79□□□□□ -0.52
LINC00598-209ENST00000635966 WIZO95785 1651 aa11.77□□□□□ -0.53
LINC00598-209ENST00000635966 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
LINC00598-209ENST00000635966 G3V3G9 751 aa11.73□□□□□ -0.53
LINC00598-209ENST00000635966 NLRP6P59044 892 aa11.73□□□□□ -0.53
LINC00598-209ENST00000635966 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
LINC00598-209ENST00000635966 URB2Q14146 1524 aaKnown RBP11.71□□□□□ -0.53
LINC00598-209ENST00000635966 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
LINC00598-209ENST00000635966 MAMSTRQ6ZN01 415 aa11.71□□□□□ -0.53
LINC00598-209ENST00000635966 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
LINC00598-209ENST00000635966 L3MBTL3Q96JM7 780 aaPredicted RBP11.71□□□□□ -0.53
LINC00598-209ENST00000635966 SCUBE2Q9NQ36 999 aa11.68□□□□□ -0.54
LINC00598-209ENST00000635966 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
LINC00598-209ENST00000635966 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
LINC00598-209ENST00000635966 MFRPQ9BY79 579 aa11.67□□□□□ -0.54
LINC00598-209ENST00000635966 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
LINC00598-209ENST00000635966 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
LINC00598-209ENST00000635966 TOP2AP11388 1531 aaKnown RBP11.65□□□□□ -0.55
LINC00598-209ENST00000635966 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
LINC00598-209ENST00000635966 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
LINC00598-209ENST00000635966 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
LINC00598-209ENST00000635966 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
LINC00598-209ENST00000635966 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
LINC00598-209ENST00000635966 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
LINC00598-209ENST00000635966 FBXO22Q8NEZ5 403 aa11.62□□□□□ -0.55
LINC00598-209ENST00000635966 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
LINC00598-209ENST00000635966 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
LINC00598-209ENST00000635966 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
LINC00598-209ENST00000635966 MS4A4AQ96JQ5 239 aa11.61□□□□□ -0.55
LINC00598-209ENST00000635966 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
LINC00598-209ENST00000635966 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
LINC00598-209ENST00000635966 BBXQ8WY36 941 aaPredicted RBP11.59□□□□□ -0.55
LINC00598-209ENST00000635966 NKX1-1Q15270 411 aaPredicted RBP11.58□□□□□ -0.56
LINC00598-209ENST00000635966 OTUD5Q96G74 571 aa11.58□□□□□ -0.56
LINC00598-209ENST00000635966 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.58□□□□□ -0.56
LINC00598-209ENST00000635966 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
LINC00598-209ENST00000635966 ABCC8Q09428 1581 aa11.57□□□□□ -0.56
LINC00598-209ENST00000635966 CYB5RLQ6IPT4 315 aa11.56□□□□□ -0.56
LINC00598-209ENST00000635966 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
LINC00598-209ENST00000635966 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
LINC00598-209ENST00000635966 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
LINC00598-209ENST00000635966 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
LINC00598-209ENST00000635966 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
LINC00598-209ENST00000635966 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
LINC00598-209ENST00000635966 GTPBP6O43824 516 aaPredicted RBP11.49□□□□□ -0.57
LINC00598-209ENST00000635966 PPP1R37O75864 691 aa11.49□□□□□ -0.57
LINC00598-209ENST00000635966 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
LINC00598-209ENST00000635966 ARAP1Q96P48 1450 aa11.48□□□□□ -0.57
LINC00598-209ENST00000635966 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
LINC00598-209ENST00000635966 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00598-209ENST00000635966 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.57
LINC00598-209ENST00000635966 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
LINC00598-209ENST00000635966 PAXIP1Q6ZW49 1069 aaPredicted RBP11.44□□□□□ -0.58
LINC00598-209ENST00000635966 CHD1O14646 1710 aa11.43□□□□□ -0.58
LINC00598-209ENST00000635966 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
LINC00598-209ENST00000635966 TMC2Q8TDI7 906 aa11.39□□□□□ -0.59
LINC00598-209ENST00000635966 SOGA1O94964 1423 aa11.38□□□□□ -0.59
LINC00598-209ENST00000635966 SNPHO15079 494 aa11.38□□□□□ -0.59
LINC00598-209ENST00000635966 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
LINC00598-209ENST00000635966 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
LINC00598-209ENST00000635966 CLASP1Q7Z460 1538 aa11.36□□□□□ -0.59
LINC00598-209ENST00000635966 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
LINC00598-209ENST00000635966 CHMP7Q8WUX9 453 aaPredicted RBP11.35□□□□□ -0.59
LINC00598-209ENST00000635966 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
LINC00598-209ENST00000635966 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
LINC00598-209ENST00000635966 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
LINC00598-209ENST00000635966 SNAPC4Q5SXM2 1469 aa11.33□□□□□ -0.6
LINC00598-209ENST00000635966 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
LINC00598-209ENST00000635966 FAM163AQ96GL9 167 aaPredicted RBP11.32□□□□□ -0.6
LINC00598-209ENST00000635966 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
LINC00598-209ENST00000635966 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
LINC00598-209ENST00000635966 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
LINC00598-209ENST00000635966 PDE4AP27815 886 aa11.29□□□□□ -0.6
LINC00598-209ENST00000635966 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
LINC00598-209ENST00000635966 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
LINC00598-209ENST00000635966 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
LINC00598-209ENST00000635966 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
LINC00598-209ENST00000635966 KIF3CO14782 793 aa11.26□□□□□ -0.61
LINC00598-209ENST00000635966 RIMBP2O15034 1052 aa11.26□□□□□ -0.61
LINC00598-209ENST00000635966 CUX1P39880 1505 aa11.25□□□□□ -0.61
LINC00598-209ENST00000635966 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
LINC00598-209ENST00000635966 FOXK1P85037 733 aa11.22□□□□□ -0.61
LINC00598-209ENST00000635966 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
LINC00598-209ENST00000635966 CRISPLD2Q9H0B8 497 aa11.22□□□□□ -0.61
LINC00598-209ENST00000635966 PLPP6Q8IY26 295 aa11.21□□□□□ -0.61
LINC00598-209ENST00000635966 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
LINC00598-209ENST00000635966 ST18O60284 1047 aa11.2□□□□□ -0.62
LINC00598-209ENST00000635966 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
LINC00598-209ENST00000635966 DSG2Q14126 1118 aa11.2□□□□□ -0.62
LINC00598-209ENST00000635966 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
LINC00598-209ENST00000635966 ABCA10Q8WWZ4 1543 aa11.19□□□□□ -0.62
LINC00598-209ENST00000635966 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
LINC00598-209ENST00000635966 PPP1R15BQ5SWA1 713 aa11.18□□□□□ -0.62
LINC00598-209ENST00000635966 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
LINC00598-209ENST00000635966 NUP160Q12769 1436 aa11.16□□□□□ -0.62
LINC00598-209ENST00000635966 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
LINC00598-209ENST00000635966 GRIN2AQ12879 1464 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms