RNA–Protein interactions for RNA: ENST00000634271.1

SMARCA2-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-218ENST00000634271 BMP2KQ9NSY1 1161 aaPredicted RBP8.42□□□□□ -1.06
SMARCA2-218ENST00000634271 VPS8Q8N3P4 1428 aa8.42□□□□□ -1.06
SMARCA2-218ENST00000634271 MAGI1Q96QZ7 1491 aaPredicted RBP8.42□□□□□ -1.06
SMARCA2-218ENST00000634271 SYNJ1O43426 1573 aa8.42□□□□□ -1.06
SMARCA2-218ENST00000634271 CSRNP3Q8WYN3 585 aa8.41□□□□□ -1.06
SMARCA2-218ENST00000634271 CCDC61Q9Y6R9 512 aa8.41□□□□□ -1.06
SMARCA2-218ENST00000634271 SNAPC4Q5SXM2 1469 aa8.4□□□□□ -1.06
SMARCA2-218ENST00000634271 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
SMARCA2-218ENST00000634271 ERICH3Q5RHP9 1530 aa8.38□□□□□ -1.07
SMARCA2-218ENST00000634271 SYNJ2O15056 1496 aa8.38□□□□□ -1.07
SMARCA2-218ENST00000634271 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
SMARCA2-218ENST00000634271 SOGA1O94964 1423 aa8.37□□□□□ -1.07
SMARCA2-218ENST00000634271 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
SMARCA2-218ENST00000634271 CLIP1P30622 1438 aa8.37□□□□□ -1.07
SMARCA2-218ENST00000634271 TDRD9Q8NDG6 1382 aaKnown RBP8.36□□□□□ -1.07
SMARCA2-218ENST00000634271 COLQQ9Y215 455 aaPredicted RBP8.36□□□□□ -1.07
SMARCA2-218ENST00000634271 GRIN2BQ13224 1484 aa8.36□□□□□ -1.07
SMARCA2-218ENST00000634271 GAPVD1Q14C86 1478 aa8.36□□□□□ -1.07
SMARCA2-218ENST00000634271 FGD5Q6ZNL6 1462 aa8.34□□□□□ -1.07
SMARCA2-218ENST00000634271 MAP3K13O43283 966 aa8.33□□□□□ -1.08
SMARCA2-218ENST00000634271 CHMP7Q8WUX9 453 aaPredicted RBP8.33□□□□□ -1.08
SMARCA2-218ENST00000634271 BIVM-ERCC5R4GMW8 1640 aa8.32□□□□□ -1.08
SMARCA2-218ENST00000634271 UBTFP17480 764 aaKnown RBP8.32□□□□□ -1.08
SMARCA2-218ENST00000634271 CUX1P39880 1505 aa8.31□□□□□ -1.08
SMARCA2-218ENST00000634271 TOP2BQ02880 1626 aa8.31□□□□□ -1.08
SMARCA2-218ENST00000634271 PBRM1Q86U86 1689 aa8.3□□□□□ -1.08
SMARCA2-218ENST00000634271 TTLL13PA6NNM8 815 aa8.3□□□□□ -1.08
SMARCA2-218ENST00000634271 SEC24BO95487 1268 aa8.3□□□□□ -1.08
SMARCA2-218ENST00000634271 TIE1P35590 1138 aa8.3□□□□□ -1.08
SMARCA2-218ENST00000634271 ABCA5Q8WWZ7 1642 aa8.29□□□□□ -1.08
SMARCA2-218ENST00000634271 RASEFQ8IZ41 740 aa8.28□□□□□ -1.08
SMARCA2-218ENST00000634271 EHMT2Q96KQ7 1210 aa8.28□□□□□ -1.08
SMARCA2-218ENST00000634271 SHROOM2Q13796 1616 aa8.28□□□□□ -1.08
SMARCA2-218ENST00000634271 ABCA10Q8WWZ4 1543 aa8.28□□□□□ -1.08
SMARCA2-218ENST00000634271 NUP160Q12769 1436 aa8.28□□□□□ -1.08
SMARCA2-218ENST00000634271 ERCC6L2Q5T890 1561 aa8.27□□□□□ -1.09
SMARCA2-218ENST00000634271 KIF13AQ9H1H9 1805 aa8.27□□□□□ -1.09
SMARCA2-218ENST00000634271 ST18O60284 1047 aa8.27□□□□□ -1.09
SMARCA2-218ENST00000634271 MIER1Q8N108 512 aa8.27□□□□□ -1.09
SMARCA2-218ENST00000634271 RRBP1Q9P2E9 1410 aaKnown RBP8.27□□□□□ -1.09
SMARCA2-218ENST00000634271 MAP3K1Q13233 1512 aa8.26□□□□□ -1.09
SMARCA2-218ENST00000634271 RUSC2Q8N2Y8 1516 aa8.26□□□□□ -1.09
SMARCA2-218ENST00000634271 TRIM35Q9UPQ4 493 aa8.26□□□□□ -1.09
SMARCA2-218ENST00000634271 CEP170Q5SW79 1584 aa8.26□□□□□ -1.09
SMARCA2-218ENST00000634271 GRIN2AQ12879 1464 aa8.26□□□□□ -1.09
SMARCA2-218ENST00000634271 SLAIN1Q8ND83 568 aa8.25□□□□□ -1.09
SMARCA2-218ENST00000634271 DHX57Q6P158 1386 aaKnown RBP8.24□□□□□ -1.09
SMARCA2-218ENST00000634271 ADAMTS12P58397 1594 aa8.23□□□□□ -1.09
SMARCA2-218ENST00000634271 YTHDC1Q96MU7 727 aaKnown RBP8.23□□□□□ -1.09
SMARCA2-218ENST00000634271 PRXQ9BXM0 1461 aa8.23□□□□□ -1.09
SMARCA2-218ENST00000634271 RAPGEF2Q9Y4G8 1499 aa8.21□□□□□ -1.09
SMARCA2-218ENST00000634271 MMRN1Q13201 1228 aa8.21□□□□□ -1.1
SMARCA2-218ENST00000634271 ABCC10Q5T3U5 1492 aa8.2□□□□□ -1.1
SMARCA2-218ENST00000634271 MAPKBP1O60336 1514 aa8.2□□□□□ -1.1
SMARCA2-218ENST00000634271 PROM2Q8N271 834 aa8.2□□□□□ -1.1
SMARCA2-218ENST00000634271 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
SMARCA2-218ENST00000634271 SUPT16HQ9Y5B9 1047 aaKnown RBP8.2□□□□□ -1.1
SMARCA2-218ENST00000634271 FHAD1B1AJZ9 1412 aa8.19□□□□□ -1.1
SMARCA2-218ENST00000634271 IER5LQ5T953 404 aa8.18□□□□□ -1.1
SMARCA2-218ENST00000634271 SPNS2Q8IVW8 549 aa8.18□□□□□ -1.1
SMARCA2-218ENST00000634271 ANP32EQ9BTT0 268 aa8.18□□□□□ -1.1
SMARCA2-218ENST00000634271 PCDHB13Q9Y5F0 798 aa8.18□□□□□ -1.1
SMARCA2-218ENST00000634271 DIP2BQ9P265 1576 aa8.18□□□□□ -1.1
SMARCA2-218ENST00000634271 CCNB3Q8WWL7 1395 aa8.16□□□□□ -1.1
SMARCA2-218ENST00000634271 KIF27Q86VH2 1401 aa8.15□□□□□ -1.1
SMARCA2-218ENST00000634271 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
SMARCA2-218ENST00000634271 CFAP43Q8NDM7 1665 aa8.14□□□□□ -1.11
SMARCA2-218ENST00000634271 PRG4Q92954 1404 aaPredicted RBP8.14□□□□□ -1.11
SMARCA2-218ENST00000634271 IFNL1Q8IU54 200 aa8.14□□□□□ -1.11
SMARCA2-218ENST00000634271 MARVELD3Q96A59 401 aa8.14□□□□□ -1.11
SMARCA2-218ENST00000634271 KDM6BO15054 1643 aa8.14□□□□□ -1.11
SMARCA2-218ENST00000634271 TIAM1Q13009 1591 aa8.14□□□□□ -1.11
SMARCA2-218ENST00000634271 PLCG2P16885 1265 aa8.13□□□□□ -1.11
SMARCA2-218ENST00000634271 ILDR1Q86SU0 546 aaPredicted RBP8.13□□□□□ -1.11
SMARCA2-218ENST00000634271 ADCY10Q96PN6 1610 aa8.13□□□□□ -1.11
SMARCA2-218ENST00000634271 FAM69CQ0P6D2 419 aa8.12□□□□□ -1.11
SMARCA2-218ENST00000634271 TMEM106CQ9BVX2 250 aa8.12□□□□□ -1.11
SMARCA2-218ENST00000634271 MYT1LQ9UL68 1186 aa8.12□□□□□ -1.11
SMARCA2-218ENST00000634271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMARCA2-218ENST00000634271 PLEKHG5O94827 1062 aa8.11□□□□□ -1.11
SMARCA2-218ENST00000634271 JPH4Q96JJ6 628 aa8.11□□□□□ -1.11
SMARCA2-218ENST00000634271 CCER2I3L3R5 266 aa8.1□□□□□ -1.11
SMARCA2-218ENST00000634271 NEFLP07196 543 aa8.1□□□□□ -1.11
SMARCA2-218ENST00000634271 TSHZ2Q9NRE2 1034 aa8.1□□□□□ -1.11
SMARCA2-218ENST00000634271 IRX5P78411 483 aaPredicted RBP8.09□□□□□ -1.11
SMARCA2-218ENST00000634271 ARHGAP35Q9NRY4 1499 aa8.08□□□□□ -1.12
SMARCA2-218ENST00000634271 SGIP1Q9BQI5 828 aa8.08□□□□□ -1.12
SMARCA2-218ENST00000634271 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
SMARCA2-218ENST00000634271 SETD5Q9C0A6 1442 aa8.07□□□□□ -1.12
SMARCA2-218ENST00000634271 TMEM121BQ9BXQ6 578 aaPredicted RBP8.07□□□□□ -1.12
SMARCA2-218ENST00000634271 GLI2P10070 1586 aa8.06□□□□□ -1.12
SMARCA2-218ENST00000634271 ERICH6BQ5W0A0 696 aa8.06□□□□□ -1.12
SMARCA2-218ENST00000634271 PPRC1Q5VV67 1664 aaKnown RBP8.05□□□□□ -1.12
SMARCA2-218ENST00000634271 KIAA0586Q9BVV6 1533 aa8.05□□□□□ -1.12
SMARCA2-218ENST00000634271 NUBP1P53384 320 aa8.05□□□□□ -1.12
SMARCA2-218ENST00000634271 PLCD3Q8N3E9 789 aa8.05□□□□□ -1.12
SMARCA2-218ENST00000634271 RAB3GAP2Q9H2M9 1393 aa8.05□□□□□ -1.12
SMARCA2-218ENST00000634271 LRRC9Q6ZRR7 1453 aa8.05□□□□□ -1.12
SMARCA2-218ENST00000634271 ADGRL1O94910 1474 aa8.04□□□□□ -1.12
SMARCA2-218ENST00000634271 FYCO1Q9BQS8 1478 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms