RNA–Protein interactions for RNA: ENST00000634271.1

SMARCA2-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-218ENST00000634271 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
SMARCA2-218ENST00000634271 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
SMARCA2-218ENST00000634271 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
SMARCA2-218ENST00000634271 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
SMARCA2-218ENST00000634271 FOXD1Q16676 465 aa14.27□□□□□ -0.13
SMARCA2-218ENST00000634271 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
SMARCA2-218ENST00000634271 MSH5O43196 834 aa13.44□□□□□ -0.26
SMARCA2-218ENST00000634271 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
SMARCA2-218ENST00000634271 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
SMARCA2-218ENST00000634271 ADRA2BP18089 450 aa12.98□□□□□ -0.33
SMARCA2-218ENST00000634271 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
SMARCA2-218ENST00000634271 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
SMARCA2-218ENST00000634271 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
SMARCA2-218ENST00000634271 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
SMARCA2-218ENST00000634271 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
SMARCA2-218ENST00000634271 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
SMARCA2-218ENST00000634271 NISCHQ9Y2I1 1504 aa11.49□□□□□ -0.57
SMARCA2-218ENST00000634271 RNF39Q9H2S5 420 aa11.47□□□□□ -0.57
SMARCA2-218ENST00000634271 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
SMARCA2-218ENST00000634271 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
SMARCA2-218ENST00000634271 C1QBPQ07021 282 aaKnown RBP11.21□□□□□ -0.61
SMARCA2-218ENST00000634271 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
SMARCA2-218ENST00000634271 RNF216Q9NWF9 866 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-218ENST00000634271 DNAJC5BQ9UF47 199 aa10.94□□□□□ -0.66
SMARCA2-218ENST00000634271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.674e-7■■■■□ 23.1
SMARCA2-218ENST00000634271 POTEHQ6S545 545 aa10.82□□□□□ -0.68
SMARCA2-218ENST00000634271 NCBP3Q53F19 620 aaKnown RBP10.67□□□□□ -0.7
SMARCA2-218ENST00000634271 SPINK5Q9NQ38 1064 aaPredicted RBP10.63□□□□□ -0.71
SMARCA2-218ENST00000634271 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
SMARCA2-218ENST00000634271 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
SMARCA2-218ENST00000634271 CAPN15O75808 1086 aa10.61□□□□□ -0.71
SMARCA2-218ENST00000634271 DSG3P32926 999 aa10.61□□□□□ -0.71
SMARCA2-218ENST00000634271 ABCC9O60706 1549 aa10.58□□□□□ -0.72
SMARCA2-218ENST00000634271 CCDC180Q9P1Z9 1646 aa10.47□□□□□ -0.73
SMARCA2-218ENST00000634271 ABCB7O75027 752 aa10.39□□□□□ -0.75
SMARCA2-218ENST00000634271 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-218ENST00000634271 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
SMARCA2-218ENST00000634271 ZNF219Q9P2Y4 722 aaPredicted RBP10.23□□□□□ -0.77
SMARCA2-218ENST00000634271 APLP2Q06481 763 aa10.14□□□□□ -0.79
SMARCA2-218ENST00000634271 CHRDL2Q6WN34 429 aa10.08□□□□□ -0.8
SMARCA2-218ENST00000634271 KCNA4P22459 653 aa10.07□□□□□ -0.8
SMARCA2-218ENST00000634271 RBM42Q9BTD8 480 aaKnown RBP10.07□□□□□ -0.8
SMARCA2-218ENST00000634271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-218ENST00000634271 HNRNPUL2Q1KMD3 747 aaKnown RBP10.04□□□□□ -0.8
SMARCA2-218ENST00000634271 RB1CC1Q8TDY2 1594 aa10.04□□□□□ -0.8
SMARCA2-218ENST00000634271 SAMD1Q6SPF0 538 aaPredicted RBP10□□□□□ -0.81
SMARCA2-218ENST00000634271 NACADO15069 1562 aa9.94□□□□□ -0.82
SMARCA2-218ENST00000634271 SP7Q8TDD2 431 aaPredicted RBP9.94□□□□□ -0.82
SMARCA2-218ENST00000634271 POLA2Q14181 598 aa9.92□□□□□ -0.82
SMARCA2-218ENST00000634271 UNC13AQ9UPW8 1703 aa9.82□□□□□ -0.84
SMARCA2-218ENST00000634271 MYO15BQ96JP2 1530 aa9.8□□□□□ -0.84
SMARCA2-218ENST00000634271 MYCNP04198 464 aaPredicted RBP9.79□□□□□ -0.84
SMARCA2-218ENST00000634271 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
SMARCA2-218ENST00000634271 BICRAQ9NZM4 1560 aa9.78□□□□□ -0.84
SMARCA2-218ENST00000634271 PABPN1Q86U42 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMARCA2-218ENST00000634271 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
SMARCA2-218ENST00000634271 REM2Q8IYK8 340 aaPredicted RBP9.71□□□□□ -0.86
SMARCA2-218ENST00000634271 SHROOM4Q9ULL8 1493 aa9.71□□□□□ -0.86
SMARCA2-218ENST00000634271 OSCARQ8IYS5 282 aa9.7□□□□□ -0.86
SMARCA2-218ENST00000634271 HAX1O00165 279 aa9.69□□□□□ -0.86
SMARCA2-218ENST00000634271 ATF5Q9Y2D1 282 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-218ENST00000634271 PITPNM1O00562 1244 aa9.67□□□□□ -0.86
SMARCA2-218ENST00000634271 ZBTB12Q9Y330 459 aaPredicted RBP9.61□□□□□ -0.87
SMARCA2-218ENST00000634271 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
SMARCA2-218ENST00000634271 CECR2Q9BXF3 1484 aa9.6□□□□□ -0.87
SMARCA2-218ENST00000634271 FXR2P51116 673 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMARCA2-218ENST00000634271 ZCCHC6Q5VYS8 1495 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-218ENST00000634271 DCAF8L2P0C7V8 631 aa9.59□□□□□ -0.87
SMARCA2-218ENST00000634271 EVX2Q03828 476 aa9.59□□□□□ -0.87
SMARCA2-218ENST00000634271 DNAJC5Q9H3Z4 198 aa9.56□□□□□ -0.88
SMARCA2-218ENST00000634271 DCAF1Q9Y4B6 1507 aa9.55□□□□□ -0.88
SMARCA2-218ENST00000634271 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-218ENST00000634271 FOXD4L1Q9NU39 408 aa9.48□□□□□ -0.89
SMARCA2-218ENST00000634271 HRCP23327 699 aa9.46□□□□□ -0.9
SMARCA2-218ENST00000634271 SCRIBQ14160 1630 aa9.42□□□□□ -0.9
SMARCA2-218ENST00000634271 PRKAR2AP13861 404 aaKnown RBP9.39□□□□□ -0.91
SMARCA2-218ENST00000634271 SLC4A1APQ9BWU0 796 aaKnown RBP9.38□□□□□ -0.91
SMARCA2-218ENST00000634271 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
SMARCA2-218ENST00000634271 CUX2O14529 1486 aa9.33□□□□□ -0.92
SMARCA2-218ENST00000634271 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
SMARCA2-218ENST00000634271 SPDYE2BA6NHP3 402 aa9.31□□□□□ -0.92
SMARCA2-218ENST00000634271 SPDYE6P0CI01 402 aa9.31□□□□□ -0.92
SMARCA2-218ENST00000634271 SPDYE2Q495Y8 402 aa9.31□□□□□ -0.92
SMARCA2-218ENST00000634271 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-218ENST00000634271 GABBR2O75899 941 aa9.3□□□□□ -0.92
SMARCA2-218ENST00000634271 LHX8Q68G74 356 aa9.3□□□□□ -0.92
SMARCA2-218ENST00000634271 ZBTB22O15209 634 aa9.29□□□□□ -0.92
SMARCA2-218ENST00000634271 PELP1Q8IZL8 1130 aaKnown RBP9.27□□□□□ -0.93
SMARCA2-218ENST00000634271 CHADLQ6NUI6 762 aa9.26□□□□□ -0.93
SMARCA2-218ENST00000634271 SPDYE1Q8NFV5 336 aaPredicted RBP9.25□□□□□ -0.93
SMARCA2-218ENST00000634271 FBLN2P98095 1184 aa9.23□□□□□ -0.93
SMARCA2-218ENST00000634271 ZEB1P37275 1124 aaPredicted RBP9.19□□□□□ -0.94
SMARCA2-218ENST00000634271 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
SMARCA2-218ENST00000634271 NCAPD3P42695 1498 aa9.18□□□□□ -0.94
SMARCA2-218ENST00000634271 SSUH2Q9Y2M2 353 aa9.17□□□□□ -0.94
SMARCA2-218ENST00000634271 ERCC6Q03468 1493 aa9.16□□□□□ -0.94
SMARCA2-218ENST00000634271 ZNF692Q9BU19 519 aaPredicted RBP9.16□□□□□ -0.94
SMARCA2-218ENST00000634271 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
SMARCA2-218ENST00000634271 POTEIP0CG38 1075 aa9.14□□□□□ -0.95
SMARCA2-218ENST00000634271 ATXN8OSP0DMR3 200 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms