RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
SPTAN1-215ENST00000628867 UHRF1BP1Q6BDS2 1440 aa12.78□□□□□ -0.36
SPTAN1-215ENST00000628867 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-215ENST00000628867 ATP10AO60312 1499 aa12.76□□□□□ -0.37
SPTAN1-215ENST00000628867 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
SPTAN1-215ENST00000628867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPTAN1-215ENST00000628867 C9orf84Q5VXU9 1444 aa12.73□□□□□ -0.37
SPTAN1-215ENST00000628867 CHIC1Q5VXU3 224 aa12.73□□□□□ -0.37
SPTAN1-215ENST00000628867 FER1L4A9Z1Z3 1794 aa12.73□□□□□ -0.37
SPTAN1-215ENST00000628867 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
SPTAN1-215ENST00000628867 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
SPTAN1-215ENST00000628867 PLCH2O75038 1416 aa12.72□□□□□ -0.37
SPTAN1-215ENST00000628867 AFAP1Q8N556 730 aa12.72□□□□□ -0.37
SPTAN1-215ENST00000628867 SAMD9Q5K651 1589 aa12.72□□□□□ -0.37
SPTAN1-215ENST00000628867 TTC37Q6PGP7 1564 aa12.71□□□□□ -0.37
SPTAN1-215ENST00000628867 SPATA31D1Q6ZQQ2 1576 aa12.7□□□□□ -0.38
SPTAN1-215ENST00000628867 UBAP1LF5GYI3 381 aa12.7□□□□□ -0.38
SPTAN1-215ENST00000628867 PREX1Q8TCU6 1659 aa12.7□□□□□ -0.38
SPTAN1-215ENST00000628867 PTPRTO14522 1441 aa12.7□□□□□ -0.38
SPTAN1-215ENST00000628867 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
SPTAN1-215ENST00000628867 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
SPTAN1-215ENST00000628867 EHMT2Q96KQ7 1210 aa12.67□□□□□ -0.38
SPTAN1-215ENST00000628867 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-215ENST00000628867 SETD1BQ9UPS6 1966 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-215ENST00000628867 TRAPPC8Q9Y2L5 1435 aa12.65□□□□□ -0.38
SPTAN1-215ENST00000628867 ZNF518AQ6AHZ1 1483 aa12.65□□□□□ -0.38
SPTAN1-215ENST00000628867 SIGLEC1Q9BZZ2 1709 aa12.63□□□□□ -0.39
SPTAN1-215ENST00000628867 ARHGAP5Q13017 1502 aa12.62□□□□□ -0.39
SPTAN1-215ENST00000628867 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
SPTAN1-215ENST00000628867 STRCQ7RTU9 1775 aa12.62□□□□□ -0.39
SPTAN1-215ENST00000628867 CLIP1P30622 1438 aa12.62□□□□□ -0.39
SPTAN1-215ENST00000628867 EEA1Q15075 1411 aa12.62□□□□□ -0.39
SPTAN1-215ENST00000628867 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
SPTAN1-215ENST00000628867 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
SPTAN1-215ENST00000628867 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
SPTAN1-215ENST00000628867 PKD2Q13563 968 aa12.59□□□□□ -0.39
SPTAN1-215ENST00000628867 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
SPTAN1-215ENST00000628867 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
SPTAN1-215ENST00000628867 FMN1Q68DA7 1419 aa12.59□□□□□ -0.39
SPTAN1-215ENST00000628867 CNTLNQ9NXG0 1405 aa12.59□□□□□ -0.39
SPTAN1-215ENST00000628867 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
SPTAN1-215ENST00000628867 NCOA1Q15788 1441 aa12.57□□□□□ -0.4
SPTAN1-215ENST00000628867 TOM1O60784 492 aa12.57□□□□□ -0.4
SPTAN1-215ENST00000628867 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
SPTAN1-215ENST00000628867 LTBP4Q8N2S1 1624 aa12.56□□□□□ -0.4
SPTAN1-215ENST00000628867 ZMYM3Q14202 1370 aa12.56□□□□□ -0.4
SPTAN1-215ENST00000628867 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
SPTAN1-215ENST00000628867 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-215ENST00000628867 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
SPTAN1-215ENST00000628867 GGT6Q6P531 493 aa12.54□□□□□ -0.4
SPTAN1-215ENST00000628867 KIF14Q15058 1648 aa12.54□□□□□ -0.4
SPTAN1-215ENST00000628867 CAMSAP1Q5T5Y3 1602 aa12.53□□□□□ -0.4
SPTAN1-215ENST00000628867 HSPA1LP34931 641 aa12.53□□□□□ -0.4
SPTAN1-215ENST00000628867 C3P01024 1663 aa12.53□□□□□ -0.4
SPTAN1-215ENST00000628867 SPAG9O60271 1321 aaKnown RBP12.52□□□□□ -0.41
SPTAN1-215ENST00000628867 NPATQ14207 1427 aa12.52□□□□□ -0.41
SPTAN1-215ENST00000628867 AGLP35573 1532 aa12.52□□□□□ -0.41
SPTAN1-215ENST00000628867 KDM5CP41229 1560 aa12.52□□□□□ -0.41
SPTAN1-215ENST00000628867 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.41
SPTAN1-215ENST00000628867 REREQ9P2R6 1566 aa12.49□□□□□ -0.41
SPTAN1-215ENST00000628867 HNRNPMP52272 730 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPTAN1-215ENST00000628867 SENP3Q9H4L4 574 aaPredicted RBP12.48□□□□□ -0.41
SPTAN1-215ENST00000628867 ABCA6Q8N139 1617 aa12.47□□□□□ -0.41
SPTAN1-215ENST00000628867 CFDP1Q9UEE9 299 aaPredicted RBP12.46□□□□□ -0.41
SPTAN1-215ENST00000628867 ANKLE2Q86XL3 938 aa12.45□□□□□ -0.42
SPTAN1-215ENST00000628867 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
SPTAN1-215ENST00000628867 ARHGAP35Q9NRY4 1499 aa12.43□□□□□ -0.42
SPTAN1-215ENST00000628867 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
SPTAN1-215ENST00000628867 ABCC1P33527 1531 aa12.42□□□□□ -0.42
SPTAN1-215ENST00000628867 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.42
SPTAN1-215ENST00000628867 PTPRKQ15262 1439 aa12.4□□□□□ -0.42
SPTAN1-215ENST00000628867 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.43
SPTAN1-215ENST00000628867 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.43
SPTAN1-215ENST00000628867 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
SPTAN1-215ENST00000628867 KIDINS220Q9ULH0 1771 aa12.39□□□□□ -0.43
SPTAN1-215ENST00000628867 A2MP01023 1474 aa12.39□□□□□ -0.43
SPTAN1-215ENST00000628867 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
SPTAN1-215ENST00000628867 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
SPTAN1-215ENST00000628867 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
SPTAN1-215ENST00000628867 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
SPTAN1-215ENST00000628867 CCNB3Q8WWL7 1395 aa12.38□□□□□ -0.43
SPTAN1-215ENST00000628867 ITSN2Q9NZM3 1697 aa12.38□□□□□ -0.43
SPTAN1-215ENST00000628867 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
SPTAN1-215ENST00000628867 CPS1P31327 1500 aa12.37□□□□□ -0.43
SPTAN1-215ENST00000628867 KIF3BO15066 747 aa12.37□□□□□ -0.43
SPTAN1-215ENST00000628867 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
SPTAN1-215ENST00000628867 A2ML1A8K2U0 1454 aa12.37□□□□□ -0.43
SPTAN1-215ENST00000628867 SHANK2Q9UPX8 1470 aa12.37□□□□□ -0.43
SPTAN1-215ENST00000628867 SAMD9LQ8IVG5 1584 aa12.37□□□□□ -0.43
SPTAN1-215ENST00000628867 CLTCQ00610 1675 aaKnown RBP12.37□□□□□ -0.43
SPTAN1-215ENST00000628867 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
SPTAN1-215ENST00000628867 CASKIN1Q8WXD9 1431 aa12.36□□□□□ -0.43
SPTAN1-215ENST00000628867 TNRQ92752 1358 aa12.35□□□□□ -0.43
SPTAN1-215ENST00000628867 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
SPTAN1-215ENST00000628867 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
SPTAN1-215ENST00000628867 KIAA1107Q9UPP5 1409 aa12.35□□□□□ -0.43
SPTAN1-215ENST00000628867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
SPTAN1-215ENST00000628867 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
SPTAN1-215ENST00000628867 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
SPTAN1-215ENST00000628867 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms