RNA–Protein interactions for RNA: ENST00000624277.3

CCDC187-204, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC187, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-204ENST00000624277 PLIN1O60240 522 aa17.25■□□□□ 0.35
CCDC187-204ENST00000624277 STAG3Q9UJ98 1225 aa17.25■□□□□ 0.35
CCDC187-204ENST00000624277 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
CCDC187-204ENST00000624277 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
CCDC187-204ENST00000624277 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
CCDC187-204ENST00000624277 SAFB2Q14151 953 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCDC187-204ENST00000624277 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.24■□□□□ 0.35
CCDC187-204ENST00000624277 NUP155O75694 1391 aa17.24■□□□□ 0.35
CCDC187-204ENST00000624277 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
CCDC187-204ENST00000624277 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.35
CCDC187-204ENST00000624277 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
CCDC187-204ENST00000624277 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
CCDC187-204ENST00000624277 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
CCDC187-204ENST00000624277 PTPRKQ15262 1439 aa17.18■□□□□ 0.34
CCDC187-204ENST00000624277 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
CCDC187-204ENST00000624277 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
CCDC187-204ENST00000624277 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
CCDC187-204ENST00000624277 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
CCDC187-204ENST00000624277 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
CCDC187-204ENST00000624277 SPRYD3Q8NCJ5 442 aa17.16■□□□□ 0.34
CCDC187-204ENST00000624277 CCDC146Q8IYE0 955 aa17.15■□□□□ 0.34
CCDC187-204ENST00000624277 NESP48681 1621 aa17.14■□□□□ 0.33
CCDC187-204ENST00000624277 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
CCDC187-204ENST00000624277 DENND4BO75064 1496 aaPredicted RBP17.13■□□□□ 0.33
CCDC187-204ENST00000624277 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
CCDC187-204ENST00000624277 EXOC6Q8TAG9 804 aa17.13■□□□□ 0.33
CCDC187-204ENST00000624277 ABCA10Q8WWZ4 1543 aa17.12■□□□□ 0.33
CCDC187-204ENST00000624277 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC187-204ENST00000624277 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
CCDC187-204ENST00000624277 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
CCDC187-204ENST00000624277 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
CCDC187-204ENST00000624277 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
CCDC187-204ENST00000624277 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCDC187-204ENST00000624277 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
CCDC187-204ENST00000624277 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
CCDC187-204ENST00000624277 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
CCDC187-204ENST00000624277 TMF1P82094 1093 aa17.1■□□□□ 0.33
CCDC187-204ENST00000624277 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
CCDC187-204ENST00000624277 MAGI3Q5TCQ9 1506 aa17.09■□□□□ 0.33
CCDC187-204ENST00000624277 U2SURPO15042 1029 aaKnown RBP17.08■□□□□ 0.33
CCDC187-204ENST00000624277 FYCO1Q9BQS8 1478 aa17.08■□□□□ 0.32
CCDC187-204ENST00000624277 C11orf95C9JLR9 678 aaPredicted RBP17.07■□□□□ 0.32
CCDC187-204ENST00000624277 FGD6Q6ZV73 1430 aa17.07■□□□□ 0.32
CCDC187-204ENST00000624277 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
CCDC187-204ENST00000624277 KDM6BO15054 1643 aa17.07■□□□□ 0.32
CCDC187-204ENST00000624277 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
CCDC187-204ENST00000624277 CLUAP1Q96AJ1 413 aa17.06■□□□□ 0.32
CCDC187-204ENST00000624277 CUL7Q14999 1698 aa17.05■□□□□ 0.32
CCDC187-204ENST00000624277 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
CCDC187-204ENST00000624277 GGT6Q6P531 493 aa17.05■□□□□ 0.32
CCDC187-204ENST00000624277 CASKIN1Q8WXD9 1431 aa17.05■□□□□ 0.32
CCDC187-204ENST00000624277 TPRNQ4KMQ1 711 aa17.04■□□□□ 0.32
CCDC187-204ENST00000624277 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
CCDC187-204ENST00000624277 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
CCDC187-204ENST00000624277 PANK3Q9H999 370 aa17.04■□□□□ 0.32
CCDC187-204ENST00000624277 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
CCDC187-204ENST00000624277 STK26Q9P289 416 aa17.03■□□□□ 0.32
CCDC187-204ENST00000624277 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
CCDC187-204ENST00000624277 RRP7AQ9Y3A4 280 aaKnown RBP17.02■□□□□ 0.32
CCDC187-204ENST00000624277 SLKQ9H2G2 1235 aaPredicted RBP17.02■□□□□ 0.32
CCDC187-204ENST00000624277 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.31
CCDC187-204ENST00000624277 USP47Q96K76 1375 aa17.02■□□□□ 0.31
CCDC187-204ENST00000624277 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.31
CCDC187-204ENST00000624277 KTN1Q86UP2 1357 aaKnown RBP17.01■□□□□ 0.31
CCDC187-204ENST00000624277 SOX12O15370 315 aa17.01■□□□□ 0.31
CCDC187-204ENST00000624277 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
CCDC187-204ENST00000624277 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
CCDC187-204ENST00000624277 ZBED9Q6R2W3 1325 aa17■□□□□ 0.31
CCDC187-204ENST00000624277 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
CCDC187-204ENST00000624277 SKAP1Q86WV1 359 aa16.99■□□□□ 0.31
CCDC187-204ENST00000624277 IPO9Q96P70 1041 aaKnown RBP16.99■□□□□ 0.31
CCDC187-204ENST00000624277 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
CCDC187-204ENST00000624277 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
CCDC187-204ENST00000624277 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
CCDC187-204ENST00000624277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC187-204ENST00000624277 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
CCDC187-204ENST00000624277 DDRGK1Q96HY6 314 aa16.98■□□□□ 0.31
CCDC187-204ENST00000624277 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.98■□□□□ 0.31
CCDC187-204ENST00000624277 ANKRD30AQ9BXX3 1397 aa16.97■□□□□ 0.31
CCDC187-204ENST00000624277 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
CCDC187-204ENST00000624277 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
CCDC187-204ENST00000624277 CRBNQ96SW2 442 aa16.95■□□□□ 0.3
CCDC187-204ENST00000624277 RALBP1Q15311 655 aa16.95■□□□□ 0.3
CCDC187-204ENST00000624277 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 KIF3BO15066 747 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 NBPF1Q3BBV0 1214 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 MSH5O43196 834 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 PDE4AP27815 886 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 NAIPQ13075 1403 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
CCDC187-204ENST00000624277 MYOM3Q5VTT5 1437 aa16.93■□□□□ 0.3
CCDC187-204ENST00000624277 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
CCDC187-204ENST00000624277 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
CCDC187-204ENST00000624277 MLECQ14165 292 aa16.92■□□□□ 0.3
CCDC187-204ENST00000624277 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
CCDC187-204ENST00000624277 GZF1Q9H116 711 aaPredicted RBP16.92■□□□□ 0.3
CCDC187-204ENST00000624277 HFM1A2PYH4 1435 aa16.92■□□□□ 0.3
CCDC187-204ENST00000624277 CFAP53Q96M91 514 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms