RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CDK11AQ9UQ88 783 aaPredicted RBP13.53□□□□□ -0.24
IGHV3-54-201ENST00000622166 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
IGHV3-54-201ENST00000622166 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
IGHV3-54-201ENST00000622166 ANKRD30BQ9BXX2 1392 aa13.52□□□□□ -0.25
IGHV3-54-201ENST00000622166 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
IGHV3-54-201ENST00000622166 NUP160Q12769 1436 aa13.5□□□□□ -0.25
IGHV3-54-201ENST00000622166 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
IGHV3-54-201ENST00000622166 CROCC2H7BZ55 1655 aa13.5□□□□□ -0.25
IGHV3-54-201ENST00000622166 ADGRL2O95490 1459 aa13.49□□□□□ -0.25
IGHV3-54-201ENST00000622166 MYT1Q01538 1121 aa13.49□□□□□ -0.25
IGHV3-54-201ENST00000622166 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
IGHV3-54-201ENST00000622166 CAMSAP2Q08AD1 1489 aa13.48□□□□□ -0.25
IGHV3-54-201ENST00000622166 POLR1AO95602 1720 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-54-201ENST00000622166 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
IGHV3-54-201ENST00000622166 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
IGHV3-54-201ENST00000622166 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
IGHV3-54-201ENST00000622166 PRG4Q92954 1404 aaPredicted RBP13.47□□□□□ -0.25
IGHV3-54-201ENST00000622166 L3MBTL2Q969R5 705 aa13.46□□□□□ -0.25
IGHV3-54-201ENST00000622166 PZPP20742 1482 aa13.46□□□□□ -0.25
IGHV3-54-201ENST00000622166 ABCA8O94911 1581 aa13.45□□□□□ -0.26
IGHV3-54-201ENST00000622166 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
IGHV3-54-201ENST00000622166 ERCC6Q03468 1493 aa13.45□□□□□ -0.26
IGHV3-54-201ENST00000622166 KIF14Q15058 1648 aa13.45□□□□□ -0.26
IGHV3-54-201ENST00000622166 NCOA1Q15788 1441 aa13.45□□□□□ -0.26
IGHV3-54-201ENST00000622166 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
IGHV3-54-201ENST00000622166 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
IGHV3-54-201ENST00000622166 PLB1Q6P1J6 1458 aa13.44□□□□□ -0.26
IGHV3-54-201ENST00000622166 ARID3CA6NKF2 412 aa13.44□□□□□ -0.26
IGHV3-54-201ENST00000622166 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
IGHV3-54-201ENST00000622166 CCDC7Q96M83 1385 aa13.42□□□□□ -0.26
IGHV3-54-201ENST00000622166 ABCC10Q5T3U5 1492 aa13.42□□□□□ -0.26
IGHV3-54-201ENST00000622166 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
IGHV3-54-201ENST00000622166 CDC42BPAQ5VT25 1732 aa13.41□□□□□ -0.26
IGHV3-54-201ENST00000622166 MBD5Q9P267 1494 aa13.41□□□□□ -0.26
IGHV3-54-201ENST00000622166 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
IGHV3-54-201ENST00000622166 KIAA1107Q9UPP5 1409 aa13.4□□□□□ -0.26
IGHV3-54-201ENST00000622166 NBPF8Q3BBV2 869 aa13.4□□□□□ -0.26
IGHV3-54-201ENST00000622166 JPH4Q96JJ6 628 aa13.4□□□□□ -0.26
IGHV3-54-201ENST00000622166 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
IGHV3-54-201ENST00000622166 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
IGHV3-54-201ENST00000622166 FKBP8Q14318 412 aa13.39□□□□□ -0.27
IGHV3-54-201ENST00000622166 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
IGHV3-54-201ENST00000622166 ANKRD30AQ9BXX3 1397 aa13.38□□□□□ -0.27
IGHV3-54-201ENST00000622166 NEFLP07196 543 aa13.38□□□□□ -0.27
IGHV3-54-201ENST00000622166 FOXD1Q16676 465 aa13.38□□□□□ -0.27
IGHV3-54-201ENST00000622166 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
IGHV3-54-201ENST00000622166 ATP10BO94823 1461 aa13.36□□□□□ -0.27
IGHV3-54-201ENST00000622166 ARHGEF5Q12774 1597 aa13.36□□□□□ -0.27
IGHV3-54-201ENST00000622166 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
IGHV3-54-201ENST00000622166 PLEKHD1A6NEE1 506 aa13.33□□□□□ -0.28
IGHV3-54-201ENST00000622166 UHRF1BP1Q6BDS2 1440 aa13.32□□□□□ -0.28
IGHV3-54-201ENST00000622166 ANKRD50Q9ULJ7 1429 aa13.32□□□□□ -0.28
IGHV3-54-201ENST00000622166 C9orf84Q5VXU9 1444 aa13.31□□□□□ -0.28
IGHV3-54-201ENST00000622166 ARHGEF12Q9NZN5 1544 aa13.31□□□□□ -0.28
IGHV3-54-201ENST00000622166 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
IGHV3-54-201ENST00000622166 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
IGHV3-54-201ENST00000622166 PTPRGP23470 1445 aa13.3□□□□□ -0.28
IGHV3-54-201ENST00000622166 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
IGHV3-54-201ENST00000622166 ARID4BQ4LE39 1312 aaPredicted RBP13.3□□□□□ -0.28
IGHV3-54-201ENST00000622166 KDM5CP41229 1560 aa13.29□□□□□ -0.28
IGHV3-54-201ENST00000622166 FBLN2P98095 1184 aa13.29□□□□□ -0.28
IGHV3-54-201ENST00000622166 PKD2Q13563 968 aa13.29□□□□□ -0.28
IGHV3-54-201ENST00000622166 BCANQ96GW7 911 aa13.29□□□□□ -0.28
IGHV3-54-201ENST00000622166 BCORL1Q5H9F3 1711 aa13.28□□□□□ -0.28
IGHV3-54-201ENST00000622166 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
IGHV3-54-201ENST00000622166 ZNF777Q9ULD5 760 aaPredicted RBP13.28□□□□□ -0.28
IGHV3-54-201ENST00000622166 RALGAPBQ86X10 1494 aa13.28□□□□□ -0.28
IGHV3-54-201ENST00000622166 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
IGHV3-54-201ENST00000622166 CDC42BPBQ9Y5S2 1711 aa13.27□□□□□ -0.29
IGHV3-54-201ENST00000622166 MAST1Q9Y2H9 1570 aa13.26□□□□□ -0.29
IGHV3-54-201ENST00000622166 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
IGHV3-54-201ENST00000622166 SAMD9LQ8IVG5 1584 aa13.25□□□□□ -0.29
IGHV3-54-201ENST00000622166 DHX29Q7Z478 1369 aaKnown RBP13.25□□□□□ -0.29
IGHV3-54-201ENST00000622166 CCDC184Q52MB2 194 aa13.25□□□□□ -0.29
IGHV3-54-201ENST00000622166 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
IGHV3-54-201ENST00000622166 NUP155O75694 1391 aa13.24□□□□□ -0.29
IGHV3-54-201ENST00000622166 USP47Q96K76 1375 aa13.24□□□□□ -0.29
IGHV3-54-201ENST00000622166 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
IGHV3-54-201ENST00000622166 TSPY4P0CV99 314 aa13.23□□□□□ -0.29
IGHV3-54-201ENST00000622166 TSPY10P0CW01 314 aa13.23□□□□□ -0.29
IGHV3-54-201ENST00000622166 ROCK2O75116 1388 aaKnown RBP13.22□□□□□ -0.29
IGHV3-54-201ENST00000622166 KIF15Q9NS87 1388 aa13.22□□□□□ -0.29
IGHV3-54-201ENST00000622166 ZBED9Q6R2W3 1325 aa13.22□□□□□ -0.29
IGHV3-54-201ENST00000622166 MRS2Q9HD23 443 aa13.22□□□□□ -0.29
IGHV3-54-201ENST00000622166 CHD1O14646 1710 aa13.22□□□□□ -0.29
IGHV3-54-201ENST00000622166 UNC13BO14795 1591 aa13.21□□□□□ -0.29
IGHV3-54-201ENST00000622166 HNRNPMP52272 730 aaKnown RBP eCLIP13.18□□□□□ -0.3
IGHV3-54-201ENST00000622166 PLXNC1O60486 1568 aa13.18□□□□□ -0.3
IGHV3-54-201ENST00000622166 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
IGHV3-54-201ENST00000622166 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
IGHV3-54-201ENST00000622166 E9PCH4 1651 aa13.17□□□□□ -0.3
IGHV3-54-201ENST00000622166 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
IGHV3-54-201ENST00000622166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.16□□□□□ -0.3
IGHV3-54-201ENST00000622166 LAMC1P11047 1609 aa13.16□□□□□ -0.3
IGHV3-54-201ENST00000622166 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
IGHV3-54-201ENST00000622166 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
IGHV3-54-201ENST00000622166 ABCC2Q92887 1545 aa13.15□□□□□ -0.3
IGHV3-54-201ENST00000622166 TRPM1Q7Z4N2 1603 aa13.15□□□□□ -0.3
IGHV3-54-201ENST00000622166 IQGAP3Q86VI3 1631 aa13.15□□□□□ -0.3
IGHV3-54-201ENST00000622166 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms