RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 EXOC6Q8TAG9 804 aa15.16■□□□□ 0.02
PCDHGA11-203ENST00000622044 PTPRKQ15262 1439 aa15.16■□□□□ 0.02
PCDHGA11-203ENST00000622044 ARXQ96QS3 562 aa15.15■□□□□ 0.02
PCDHGA11-203ENST00000622044 HFM1A2PYH4 1435 aa15.15■□□□□ 0.02
PCDHGA11-203ENST00000622044 NAIPQ13075 1403 aa15.15■□□□□ 0.02
PCDHGA11-203ENST00000622044 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
PCDHGA11-203ENST00000622044 CASKIN1Q8WXD9 1431 aa15.14■□□□□ 0.01
PCDHGA11-203ENST00000622044 NCOA2Q15596 1464 aa15.13■□□□□ 0.01
PCDHGA11-203ENST00000622044 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
PCDHGA11-203ENST00000622044 ANO8Q9HCE9 1232 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA11-203ENST00000622044 PLIN1O60240 522 aa15.13■□□□□ 0.01
PCDHGA11-203ENST00000622044 CC2D1BQ5T0F9 858 aaKnown RBP15.13■□□□□ 0.01
PCDHGA11-203ENST00000622044 MYOM3Q5VTT5 1437 aa15.13■□□□□ 0.01
PCDHGA11-203ENST00000622044 ZNF644Q9H582 1327 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA11-203ENST00000622044 PKD2Q13563 968 aa15.12■□□□□ 0.01
PCDHGA11-203ENST00000622044 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
PCDHGA11-203ENST00000622044 CFDP1Q9UEE9 299 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA11-203ENST00000622044 RCAN3Q9UKA8 241 aa15.11■□□□□ 0.01
PCDHGA11-203ENST00000622044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
PCDHGA11-203ENST00000622044 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
PCDHGA11-203ENST00000622044 DCAF11Q8TEB1 546 aa15.1■□□□□ 0.01
PCDHGA11-203ENST00000622044 RGS3P49796 1198 aa15.09■□□□□ 0.01
PCDHGA11-203ENST00000622044 SKAP1Q86WV1 359 aa15.09■□□□□ 0.01
PCDHGA11-203ENST00000622044 GAPVD1Q14C86 1478 aa15.08■□□□□ 0
PCDHGA11-203ENST00000622044 PDE4AP27815 886 aa15.07■□□□□ 0
PCDHGA11-203ENST00000622044 MAP3K1Q13233 1512 aa15.06■□□□□ 0
PCDHGA11-203ENST00000622044 USP47Q96K76 1375 aa15.05■□□□□ 0
PCDHGA11-203ENST00000622044 ST20-MTHFSA0A0A6YYL1 179 aa15.05■□□□□ 0
PCDHGA11-203ENST00000622044 RRP1P56182 461 aaKnown RBP15.04■□□□□ -0
PCDHGA11-203ENST00000622044 PPM1GO15355 546 aaPredicted RBP15.04■□□□□ -0
PCDHGA11-203ENST00000622044 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
PCDHGA11-203ENST00000622044 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
PCDHGA11-203ENST00000622044 TCERG1O14776 1098 aaKnown RBP15.02■□□□□ -0
PCDHGA11-203ENST00000622044 PTPN23Q9H3S7 1636 aa15.02□□□□□ -0.01
PCDHGA11-203ENST00000622044 CDCA7LQ96GN5 454 aa15.02□□□□□ -0.01
PCDHGA11-203ENST00000622044 ZNF608Q9ULD9 1512 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA11-203ENST00000622044 TSPY4P0CV99 314 aa15.01□□□□□ -0.01
PCDHGA11-203ENST00000622044 TSPY10P0CW01 314 aa15.01□□□□□ -0.01
PCDHGA11-203ENST00000622044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15□□□□□ -0.01
PCDHGA11-203ENST00000622044 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
PCDHGA11-203ENST00000622044 DDRGK1Q96HY6 314 aa14.99□□□□□ -0.01
PCDHGA11-203ENST00000622044 PNISRQ8TF01 805 aaKnown RBP14.98□□□□□ -0.01
PCDHGA11-203ENST00000622044 NCOA1Q15788 1441 aa14.97□□□□□ -0.01
PCDHGA11-203ENST00000622044 CRBNQ96SW2 442 aa14.97□□□□□ -0.01
PCDHGA11-203ENST00000622044 LAMC3Q9Y6N6 1575 aa14.97□□□□□ -0.01
PCDHGA11-203ENST00000622044 SMG6Q86US8 1419 aaKnown RBP14.97□□□□□ -0.01
PCDHGA11-203ENST00000622044 ABCA10Q8WWZ4 1543 aa14.95□□□□□ -0.02
PCDHGA11-203ENST00000622044 NUP155O75694 1391 aa14.95□□□□□ -0.02
PCDHGA11-203ENST00000622044 PRKCSHP14314 528 aaPredicted RBP14.94□□□□□ -0.02
PCDHGA11-203ENST00000622044 BRPF3Q9ULD4 1205 aa14.94□□□□□ -0.02
PCDHGA11-203ENST00000622044 MYBBP1AQ9BQG0 1328 aaKnown RBP14.94□□□□□ -0.02
PCDHGA11-203ENST00000622044 KIF21AQ7Z4S6 1674 aa14.94□□□□□ -0.02
PCDHGA11-203ENST00000622044 ROCK2O75116 1388 aaKnown RBP14.93□□□□□ -0.02
PCDHGA11-203ENST00000622044 EFCAB5A4FU69 1503 aa14.93□□□□□ -0.02
PCDHGA11-203ENST00000622044 NLRP13Q86W25 1043 aa14.92□□□□□ -0.02
PCDHGA11-203ENST00000622044 KTN1Q86UP2 1357 aaKnown RBP14.92□□□□□ -0.02
PCDHGA11-203ENST00000622044 RALBP1Q15311 655 aa14.92□□□□□ -0.02
PCDHGA11-203ENST00000622044 KIF15Q9NS87 1388 aa14.92□□□□□ -0.02
PCDHGA11-203ENST00000622044 MRC2Q9UBG0 1479 aa14.92□□□□□ -0.02
PCDHGA11-203ENST00000622044 CFAP43Q8NDM7 1665 aa14.9□□□□□ -0.02
PCDHGA11-203ENST00000622044 NEUROD2Q15784 382 aa14.89□□□□□ -0.03
PCDHGA11-203ENST00000622044 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA11-203ENST00000622044 ANKRD30BQ9BXX2 1392 aa14.89□□□□□ -0.03
PCDHGA11-203ENST00000622044 BACH2Q9BYV9 841 aa14.89□□□□□ -0.03
PCDHGA11-203ENST00000622044 CDK13Q14004 1512 aaKnown RBP14.89□□□□□ -0.03
PCDHGA11-203ENST00000622044 PLEKHD1A6NEE1 506 aa14.87□□□□□ -0.03
PCDHGA11-203ENST00000622044 SLKQ9H2G2 1235 aaPredicted RBP14.87□□□□□ -0.03
PCDHGA11-203ENST00000622044 GSE1Q14687 1217 aa14.87□□□□□ -0.03
PCDHGA11-203ENST00000622044 SUPT6HQ7KZ85 1726 aaKnown RBP14.87□□□□□ -0.03
PCDHGA11-203ENST00000622044 JPH4Q96JJ6 628 aa14.86□□□□□ -0.03
PCDHGA11-203ENST00000622044 KNSTRNQ9Y448 316 aa14.86□□□□□ -0.03
PCDHGA11-203ENST00000622044 EHBP1L1Q8N3D4 1523 aa14.86□□□□□ -0.03
PCDHGA11-203ENST00000622044 NFKBIBQ15653 356 aa14.86□□□□□ -0.03
PCDHGA11-203ENST00000622044 CCDC146Q8IYE0 955 aa14.86□□□□□ -0.03
PCDHGA11-203ENST00000622044 SPRYD3Q8NCJ5 442 aa14.86□□□□□ -0.03
PCDHGA11-203ENST00000622044 FRAT1Q92837 279 aaPredicted RBP14.85□□□□□ -0.03
PCDHGA11-203ENST00000622044 PANK3Q9H999 370 aa14.85□□□□□ -0.03
PCDHGA11-203ENST00000622044 USP35Q9P2H5 1018 aa14.85□□□□□ -0.03
PCDHGA11-203ENST00000622044 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.03
PCDHGA11-203ENST00000622044 SNAPC4Q5SXM2 1469 aa14.84□□□□□ -0.03
PCDHGA11-203ENST00000622044 C20orf194Q5TEA3 1177 aa14.83□□□□□ -0.04
PCDHGA11-203ENST00000622044 TNNT2P45379 298 aaPredicted RBP14.82□□□□□ -0.04
PCDHGA11-203ENST00000622044 ANKRD30AQ9BXX3 1397 aa14.82□□□□□ -0.04
PCDHGA11-203ENST00000622044 RPRD2Q5VT52 1461 aaKnown RBP14.82□□□□□ -0.04
PCDHGA11-203ENST00000622044 PDE3BQ13370 1112 aa14.82□□□□□ -0.04
PCDHGA11-203ENST00000622044 MS4A1P11836 297 aa14.81□□□□□ -0.04
PCDHGA11-203ENST00000622044 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
PCDHGA11-203ENST00000622044 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
PCDHGA11-203ENST00000622044 DAPK1P53355 1430 aa14.8□□□□□ -0.04
PCDHGA11-203ENST00000622044 GRIN2BQ13224 1484 aa14.8□□□□□ -0.04
PCDHGA11-203ENST00000622044 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
PCDHGA11-203ENST00000622044 TMF1P82094 1093 aa14.8□□□□□ -0.04
PCDHGA11-203ENST00000622044 FRAT2O75474 233 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA11-203ENST00000622044 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA11-203ENST00000622044 DHX29Q7Z478 1369 aaKnown RBP14.78□□□□□ -0.04
PCDHGA11-203ENST00000622044 EPRSP07814 1512 aaKnown RBP14.78□□□□□ -0.04
PCDHGA11-203ENST00000622044 ADAMTS8Q9UP79 889 aa14.78□□□□□ -0.04
PCDHGA11-203ENST00000622044 PRDM2Q13029 1718 aa14.77□□□□□ -0.04
PCDHGA11-203ENST00000622044 KDM6BO15054 1643 aa14.77□□□□□ -0.04
PCDHGA11-203ENST00000622044 GZF1Q9H116 711 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms