RNA–Protein interactions for RNA: ENST00000621499.1

GABRB3-214, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

Gene GABRB3, Length 3,860 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-214ENST00000621499 TSPY10P0CW01 314 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 CCDC136Q96JN2 1154 aa5.52□□□□□ -1.53
GABRB3-214ENST00000621499 MNX1P50219 401 aaPredicted RBP5.51□□□□□ -1.53
GABRB3-214ENST00000621499 FMN1Q68DA7 1419 aa5.51□□□□□ -1.53
GABRB3-214ENST00000621499 RRBP1Q9P2E9 1410 aaKnown RBP5.51□□□□□ -1.53
GABRB3-214ENST00000621499 ERICH3Q5RHP9 1530 aa5.51□□□□□ -1.53
GABRB3-214ENST00000621499 FANCD2Q9BXW9 1451 aa5.51□□□□□ -1.53
GABRB3-214ENST00000621499 RGL3Q3MIN7 710 aa5.51□□□□□ -1.53
GABRB3-214ENST00000621499 B4GALNT3Q6L9W6 998 aa5.51□□□□□ -1.53
GABRB3-214ENST00000621499 MPHOSPH9Q99550 1183 aa5.5□□□□□ -1.53
GABRB3-214ENST00000621499 RBM19Q9Y4C8 960 aaKnown RBP5.5□□□□□ -1.53
GABRB3-214ENST00000621499 LRRC9Q6ZRR7 1453 aa5.5□□□□□ -1.53
GABRB3-214ENST00000621499 L3MBTL2Q969R5 705 aa5.5□□□□□ -1.53
GABRB3-214ENST00000621499 CFTRP13569 1480 aa5.49□□□□□ -1.53
GABRB3-214ENST00000621499 NBR1Q14596 966 aa5.49□□□□□ -1.53
GABRB3-214ENST00000621499 ANP32AP39687 249 aaKnown RBP5.49□□□□□ -1.53
GABRB3-214ENST00000621499 PLEKHD1A6NEE1 506 aa5.48□□□□□ -1.53
GABRB3-214ENST00000621499 CARD11Q9BXL7 1154 aa5.48□□□□□ -1.53
GABRB3-214ENST00000621499 CCDC18Q5T9S5 1454 aa5.48□□□□□ -1.53
GABRB3-214ENST00000621499 PPP4R2Q9NY27 417 aa5.47□□□□□ -1.53
GABRB3-214ENST00000621499 STAG3Q9UJ98 1225 aa5.47□□□□□ -1.53
GABRB3-214ENST00000621499 FGD6Q6ZV73 1430 aa5.46□□□□□ -1.53
GABRB3-214ENST00000621499 PEG3Q9GZU2 1588 aa5.46□□□□□ -1.54
GABRB3-214ENST00000621499 ZNF692Q9BU19 519 aaPredicted RBP5.46□□□□□ -1.54
GABRB3-214ENST00000621499 RGL2O15211 777 aa5.46□□□□□ -1.54
GABRB3-214ENST00000621499 DCAF11Q8TEB1 546 aa5.46□□□□□ -1.54
GABRB3-214ENST00000621499 RNF25Q96BH1 459 aaPredicted RBP5.46□□□□□ -1.54
GABRB3-214ENST00000621499 PDS5BQ9NTI5 1447 aa5.46□□□□□ -1.54
GABRB3-214ENST00000621499 WDR97A6NE52 1622 aa5.46□□□□□ -1.54
GABRB3-214ENST00000621499 NESP48681 1621 aa5.46□□□□□ -1.54
GABRB3-214ENST00000621499 TIAM1Q13009 1591 aa5.45□□□□□ -1.54
GABRB3-214ENST00000621499 CHGAP10645 457 aaKnown RBP5.45□□□□□ -1.54
GABRB3-214ENST00000621499 SPOCK2Q92563 424 aa5.45□□□□□ -1.54
GABRB3-214ENST00000621499 ZNF644Q9H582 1327 aaPredicted RBP5.44□□□□□ -1.54
GABRB3-214ENST00000621499 CANXP27824 592 aaKnown RBP5.44□□□□□ -1.54
GABRB3-214ENST00000621499 ZBTB47Q9UFB7 747 aaPredicted RBP5.44□□□□□ -1.54
GABRB3-214ENST00000621499 HMGXB3Q12766 1538 aa5.44□□□□□ -1.54
GABRB3-214ENST00000621499 NUBP1P53384 320 aa5.44□□□□□ -1.54
GABRB3-214ENST00000621499 CASKIN1Q8WXD9 1431 aa5.43□□□□□ -1.54
GABRB3-214ENST00000621499 GAPVD1Q14C86 1478 aa5.43□□□□□ -1.54
GABRB3-214ENST00000621499 CC2D1BQ5T0F9 858 aaKnown RBP5.43□□□□□ -1.54
GABRB3-214ENST00000621499 MYOM3Q5VTT5 1437 aa5.43□□□□□ -1.54
GABRB3-214ENST00000621499 NCOA2Q15596 1464 aa5.43□□□□□ -1.54
GABRB3-214ENST00000621499 PRKCSHP14314 528 aaPredicted RBP5.43□□□□□ -1.54
GABRB3-214ENST00000621499 UACAQ9BZF9 1416 aa5.43□□□□□ -1.54
GABRB3-214ENST00000621499 PRKRIP1Q9H875 184 aaPredicted RBP5.43□□□□□ -1.54
GABRB3-214ENST00000621499 WASHC2AQ641Q2 1341 aa5.42□□□□□ -1.54
GABRB3-214ENST00000621499 WDR43Q15061 677 aaKnown RBP eCLIP5.42□□□□□ -1.54
GABRB3-214ENST00000621499 BCL11AQ9H165 835 aa5.42□□□□□ -1.54
GABRB3-214ENST00000621499 BIVM-ERCC5R4GMW8 1640 aa5.42□□□□□ -1.54
GABRB3-214ENST00000621499 NUP155O75694 1391 aa5.42□□□□□ -1.54
GABRB3-214ENST00000621499 POLA1P09884 1462 aaPredicted RBP5.42□□□□□ -1.54
GABRB3-214ENST00000621499 ERCC6Q03468 1493 aa5.41□□□□□ -1.54
GABRB3-214ENST00000621499 HNRNPMP52272 730 aaKnown RBP eCLIP5.41□□□□□ -1.54
GABRB3-214ENST00000621499 CCDC184Q52MB2 194 aa5.41□□□□□ -1.54
GABRB3-214ENST00000621499 BBXQ8WY36 941 aaPredicted RBP5.41□□□□□ -1.54
GABRB3-214ENST00000621499 PCF11O94913 1555 aaKnown RBP5.41□□□□□ -1.54
GABRB3-214ENST00000621499 AQRO60306 1485 aaKnown RBP eCLIP5.41□□□□□ -1.54
GABRB3-214ENST00000621499 FYCO1Q9BQS8 1478 aa5.41□□□□□ -1.54
GABRB3-214ENST00000621499 TOPBP1Q92547 1522 aa5.41□□□□□ -1.54
GABRB3-214ENST00000621499 CREBZFQ9NS37 354 aa5.4□□□□□ -1.55
GABRB3-214ENST00000621499 ST20-MTHFSA0A0A6YYL1 179 aa5.39□□□□□ -1.55
GABRB3-214ENST00000621499 NBPF8Q3BBV2 869 aa5.39□□□□□ -1.55
GABRB3-214ENST00000621499 KIF7Q2M1P5 1343 aa5.39□□□□□ -1.55
GABRB3-214ENST00000621499 CC2D2AQ9P2K1 1620 aa5.39□□□□□ -1.55
GABRB3-214ENST00000621499 MAPKBP1O60336 1514 aa5.39□□□□□ -1.55
GABRB3-214ENST00000621499 NOP58Q9Y2X3 529 aaKnown RBP5.39□□□□□ -1.55
GABRB3-214ENST00000621499 CCDC7Q96M83 1385 aa5.39□□□□□ -1.55
GABRB3-214ENST00000621499 ANKRD30AQ9BXX3 1397 aa5.39□□□□□ -1.55
GABRB3-214ENST00000621499 JPH4Q96JJ6 628 aa5.38□□□□□ -1.55
GABRB3-214ENST00000621499 NUDCQ9Y266 331 aa5.38□□□□□ -1.55
GABRB3-214ENST00000621499 KNSTRNQ9Y448 316 aa5.38□□□□□ -1.55
GABRB3-214ENST00000621499 LAS1LQ9Y4W2 734 aaKnown RBP5.38□□□□□ -1.55
GABRB3-214ENST00000621499 HFM1A2PYH4 1435 aa5.38□□□□□ -1.55
GABRB3-214ENST00000621499 NAIPQ13075 1403 aa5.38□□□□□ -1.55
GABRB3-214ENST00000621499 NKX1-1Q15270 411 aaPredicted RBP5.37□□□□□ -1.55
GABRB3-214ENST00000621499 VSIG10Q8N0Z9 540 aa5.37□□□□□ -1.55
GABRB3-214ENST00000621499 ROCK2O75116 1388 aaKnown RBP5.37□□□□□ -1.55
GABRB3-214ENST00000621499 NEUROD2Q15784 382 aa5.37□□□□□ -1.55
GABRB3-214ENST00000621499 USP47Q96K76 1375 aa5.37□□□□□ -1.55
GABRB3-214ENST00000621499 EFCAB5A4FU69 1503 aa5.37□□□□□ -1.55
GABRB3-214ENST00000621499 CNTLNQ9NXG0 1405 aa5.37□□□□□ -1.55
GABRB3-214ENST00000621499 ZBED9Q6R2W3 1325 aa5.37□□□□□ -1.55
GABRB3-214ENST00000621499 C11orf95C9JLR9 678 aaPredicted RBP5.37□□□□□ -1.55
GABRB3-214ENST00000621499 CARMIL2Q6F5E8 1435 aa5.36□□□□□ -1.55
GABRB3-214ENST00000621499 ERICH6BQ5W0A0 696 aa5.36□□□□□ -1.55
GABRB3-214ENST00000621499 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.36□□□□□ -1.55
GABRB3-214ENST00000621499 TNNT2P45379 298 aaPredicted RBP5.36□□□□□ -1.55
GABRB3-214ENST00000621499 RGS3P49796 1198 aa5.36□□□□□ -1.55
GABRB3-214ENST00000621499 DNMBPQ6XZF7 1577 aa5.36□□□□□ -1.55
GABRB3-214ENST00000621499 TMF1P82094 1093 aa5.36□□□□□ -1.55
GABRB3-214ENST00000621499 RCAN3Q9UKA8 241 aa5.36□□□□□ -1.55
GABRB3-214ENST00000621499 ABCA10Q8WWZ4 1543 aa5.36□□□□□ -1.55
GABRB3-214ENST00000621499 PTPRKQ15262 1439 aa5.36□□□□□ -1.55
GABRB3-214ENST00000621499 MAP3K1Q13233 1512 aa5.35□□□□□ -1.55
GABRB3-214ENST00000621499 PRDM2Q13029 1718 aa5.35□□□□□ -1.55
GABRB3-214ENST00000621499 KTN1Q86UP2 1357 aaKnown RBP5.35□□□□□ -1.55
GABRB3-214ENST00000621499 CDK13Q14004 1512 aaKnown RBP5.35□□□□□ -1.55
GABRB3-214ENST00000621499 HS6ST3Q8IZP7 471 aa5.35□□□□□ -1.55
GABRB3-214ENST00000621499 CHRM1P11229 460 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms