RNA–Protein interactions for RNA: ENST00000621499.1

GABRB3-214, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

Gene GABRB3, Length 3,860 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-214ENST00000621499 AEBP2Q6ZN18 517 aaPredicted RBP9.82□□□□□ -0.84
GABRB3-214ENST00000621499 CHIC1Q5VXU3 224 aa9.74□□□□□ -0.85
GABRB3-214ENST00000621499 PHF23Q9BUL5 403 aaPredicted RBP8.74□□□□□ -1.01
GABRB3-214ENST00000621499 SENP3Q9H4L4 574 aaPredicted RBP8.03□□□□□ -1.12
GABRB3-214ENST00000621499 PLPPR3Q6T4P5 718 aa7.88□□□□□ -1.15
GABRB3-214ENST00000621499 NISCHQ9Y2I1 1504 aa7.61□□□□□ -1.19
GABRB3-214ENST00000621499 FOXD1Q16676 465 aa7.56□□□□□ -1.2
GABRB3-214ENST00000621499 PPP6R1Q9UPN7 881 aa7.56□□□□□ -1.2
GABRB3-214ENST00000621499 ADRA2BP18089 450 aa7.53□□□□□ -1.2
GABRB3-214ENST00000621499 KCNA4P22459 653 aa7.22□□□□□ -1.25
GABRB3-214ENST00000621499 DCAF8L2P0C7V8 631 aa7.09□□□□□ -1.27
GABRB3-214ENST00000621499 SHROOM4Q9ULL8 1493 aa7.03□□□□□ -1.28
GABRB3-214ENST00000621499 SUPT5HO00267 1087 aaKnown RBP7.01□□□□□ -1.29
GABRB3-214ENST00000621499 PPP4R3CPQ6ZMV5 832 aa7.01□□□□□ -1.29
GABRB3-214ENST00000621499 PIAS4Q8N2W9 510 aaPredicted RBP6.99□□□□□ -1.29
GABRB3-214ENST00000621499 DNAJC5BQ9UF47 199 aa6.95□□□□□ -1.3
GABRB3-214ENST00000621499 CSRNP3Q8WYN3 585 aa6.91□□□□□ -1.3
GABRB3-214ENST00000621499 NPM3O75607 178 aaKnown RBP6.89□□□□□ -1.31
GABRB3-214ENST00000621499 ZBTB22O15209 634 aa6.83□□□□□ -1.32
GABRB3-214ENST00000621499 EHMT2Q96KQ7 1210 aa6.8□□□□□ -1.32
GABRB3-214ENST00000621499 SLC4A1APQ9BWU0 796 aaKnown RBP6.77□□□□□ -1.33
GABRB3-214ENST00000621499 CNKSR2Q8WXI2 1034 aa6.76□□□□□ -1.33
GABRB3-214ENST00000621499 NCBP3Q53F19 620 aaKnown RBP6.73□□□□□ -1.33
GABRB3-214ENST00000621499 MSH5O43196 834 aa6.7□□□□□ -1.34
GABRB3-214ENST00000621499 MAPK8IP2Q13387 824 aaPredicted RBP6.7□□□□□ -1.34
GABRB3-214ENST00000621499 PCGF6Q9BYE7 350 aa6.63□□□□□ -1.35
GABRB3-214ENST00000621499 RNF216Q9NWF9 866 aaPredicted RBP6.62□□□□□ -1.35
GABRB3-214ENST00000621499 HOXD11P31277 338 aaPredicted RBP6.61□□□□□ -1.35
GABRB3-214ENST00000621499 DMRT2Q9Y5R5 561 aa6.57□□□□□ -1.36
GABRB3-214ENST00000621499 SCAF1Q9H7N4 1312 aaKnown RBP6.57□□□□□ -1.36
GABRB3-214ENST00000621499 FAM9AQ8IZU1 332 aaPredicted RBP6.56□□□□□ -1.36
GABRB3-214ENST00000621499 SLC4A2P04920 1241 aa6.54□□□□□ -1.36
GABRB3-214ENST00000621499 LOC105371045A0A1W2PR82 267 aa6.49□□□□□ -1.37
GABRB3-214ENST00000621499 FOXD4L1Q9NU39 408 aa6.49□□□□□ -1.37
GABRB3-214ENST00000621499 TRIM41Q8WV44 630 aa6.45□□□□□ -1.38
GABRB3-214ENST00000621499 HRCP23327 699 aa6.45□□□□□ -1.38
GABRB3-214ENST00000621499 TTBK1Q5TCY1 1321 aaPredicted RBP6.43□□□□□ -1.38
GABRB3-214ENST00000621499 PPARGC1BQ86YN6 1023 aaKnown RBP6.42□□□□□ -1.38
GABRB3-214ENST00000621499 ZCCHC6Q5VYS8 1495 aaKnown RBP6.37□□□□□ -1.39
GABRB3-214ENST00000621499 TRIM26Q12899 539 aaPredicted RBP6.35□□□□□ -1.39
GABRB3-214ENST00000621499 ATXN8OSP0DMR3 200 aa6.31□□□□□ -1.4
GABRB3-214ENST00000621499 MYO15BQ96JP2 1530 aa6.31□□□□□ -1.4
GABRB3-214ENST00000621499 ZEB1P37275 1124 aaPredicted RBP6.29□□□□□ -1.4
GABRB3-214ENST00000621499 CCER1Q8TC90 406 aaPredicted RBP6.29□□□□□ -1.4
GABRB3-214ENST00000621499 RANGAP1P46060 587 aaPredicted RBP6.28□□□□□ -1.4
GABRB3-214ENST00000621499 ATF5Q9Y2D1 282 aaPredicted RBP6.26□□□□□ -1.41
GABRB3-214ENST00000621499 CCDC180Q9P1Z9 1646 aa6.26□□□□□ -1.41
GABRB3-214ENST00000621499 UBTFP17480 764 aaKnown RBP6.25□□□□□ -1.41
GABRB3-214ENST00000621499 ABCC9O60706 1549 aa6.24□□□□□ -1.41
GABRB3-214ENST00000621499 MYCNP04198 464 aaPredicted RBP6.24□□□□□ -1.41
GABRB3-214ENST00000621499 SLC24A1O60721 1099 aa6.23□□□□□ -1.41
GABRB3-214ENST00000621499 APLP2Q06481 763 aa6.23□□□□□ -1.41
GABRB3-214ENST00000621499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.2□□□□□ -1.42
GABRB3-214ENST00000621499 SCRIBQ14160 1630 aa6.19□□□□□ -1.42
GABRB3-214ENST00000621499 U3KPZ7 1027 aaPredicted RBP6.17□□□□□ -1.42
GABRB3-214ENST00000621499 DCAF1Q9Y4B6 1507 aa6.16□□□□□ -1.42
GABRB3-214ENST00000621499 YTHDC1Q96MU7 727 aaKnown RBP6.15□□□□□ -1.42
GABRB3-214ENST00000621499 CENPBP07199 599 aaPredicted RBP6.14□□□□□ -1.43
GABRB3-214ENST00000621499 PABPN1Q86U42 306 aaKnown RBP eCLIP6.14□□□□□ -1.43
GABRB3-214ENST00000621499 HNRNPUL2Q1KMD3 747 aaKnown RBP6.13□□□□□ -1.43
GABRB3-214ENST00000621499 RSF1Q96T23 1441 aaPredicted RBP6.11□□□□□ -1.43
GABRB3-214ENST00000621499 ATP1B4Q9UN42 357 aaPredicted RBP6.08□□□□□ -1.44
GABRB3-214ENST00000621499 DIEXFQ68CQ4 756 aaKnown RBP6.07□□□□□ -1.44
GABRB3-214ENST00000621499 PROM2Q8N271 834 aa6.07□□□□□ -1.44
GABRB3-214ENST00000621499 RTN4Q9NQC3 1192 aaKnown RBP6.06□□□□□ -1.44
GABRB3-214ENST00000621499 ITGAEP38570 1179 aa6.06□□□□□ -1.44
GABRB3-214ENST00000621499 PELP1Q8IZL8 1130 aaKnown RBP6.04□□□□□ -1.44
GABRB3-214ENST00000621499 CECR2Q9BXF3 1484 aa6.03□□□□□ -1.44
GABRB3-214ENST00000621499 MKRN4PQ13434 485 aaPredicted RBP6.01□□□□□ -1.45
GABRB3-214ENST00000621499 RB1CC1Q8TDY2 1594 aa6.01□□□□□ -1.45
GABRB3-214ENST00000621499 GTF3C3Q9Y5Q9 886 aa5.99□□□□□ -1.45
GABRB3-214ENST00000621499 FKBP8Q14318 412 aa5.99□□□□□ -1.45
GABRB3-214ENST00000621499 SAMD1Q6SPF0 538 aaPredicted RBP5.97□□□□□ -1.45
GABRB3-214ENST00000621499 ACIN1Q9UKV3 1341 aaKnown RBP5.97□□□□□ -1.45
GABRB3-214ENST00000621499 ZNF316A6NFI3 1004 aaPredicted RBP5.97□□□□□ -1.45
GABRB3-214ENST00000621499 MROH2BQ7Z745 1585 aa5.96□□□□□ -1.46
GABRB3-214ENST00000621499 AMER1Q5JTC6 1135 aaPredicted RBP5.95□□□□□ -1.46
GABRB3-214ENST00000621499 ZNF219Q9P2Y4 722 aaPredicted RBP5.95□□□□□ -1.46
GABRB3-214ENST00000621499 NEUROD1Q13562 356 aa5.95□□□□□ -1.46
GABRB3-214ENST00000621499 NACADO15069 1562 aa5.93□□□□□ -1.46
GABRB3-214ENST00000621499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.93□□□□□ -1.46
GABRB3-214ENST00000621499 RNF39Q9H2S5 420 aa5.93□□□□□ -1.46
GABRB3-214ENST00000621499 CEP162Q5TB80 1403 aa5.92□□□□□ -1.46
GABRB3-214ENST00000621499 FAM50AQ14320 339 aaKnown RBP5.9□□□□□ -1.46
GABRB3-214ENST00000621499 WIZO95785 1651 aa5.9□□□□□ -1.46
GABRB3-214ENST00000621499 SOGA1O94964 1423 aa5.9□□□□□ -1.46
GABRB3-214ENST00000621499 ABCC8Q09428 1581 aa5.89□□□□□ -1.47
GABRB3-214ENST00000621499 P3H3Q8IVL6 736 aa5.89□□□□□ -1.47
GABRB3-214ENST00000621499 CCDC88BA6NC98 1476 aa5.88□□□□□ -1.47
GABRB3-214ENST00000621499 BAZ1AQ9NRL2 1556 aaPredicted RBP5.88□□□□□ -1.47
GABRB3-214ENST00000621499 MIER1Q8N108 512 aa5.87□□□□□ -1.47
GABRB3-214ENST00000621499 CLIP1P30622 1438 aa5.87□□□□□ -1.47
GABRB3-214ENST00000621499 TNIKQ9UKE5 1360 aa5.86□□□□□ -1.47
GABRB3-214ENST00000621499 NEFLP07196 543 aa5.86□□□□□ -1.47
GABRB3-214ENST00000621499 WRNQ14191 1432 aaPredicted RBP eCLIP5.86□□□□□ -1.47
GABRB3-214ENST00000621499 GOLGA3Q08378 1498 aa5.85□□□□□ -1.47
GABRB3-214ENST00000621499 SPINK5Q9NQ38 1064 aaPredicted RBP5.85□□□□□ -1.47
GABRB3-214ENST00000621499 BCANQ96GW7 911 aa5.84□□□□□ -1.47
GABRB3-214ENST00000621499 CNGB1Q14028 1251 aaPredicted RBP5.84□□□□□ -1.47
GABRB3-214ENST00000621499 EEA1Q15075 1411 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms