RNA–Protein interactions for RNA: ENST00000620693.4

PACSIN1-207, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-207ENST00000620693 PRKRIP1Q9H875 184 aaPredicted RBP16.64■□□□□ 0.25
PACSIN1-207ENST00000620693 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
PACSIN1-207ENST00000620693 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
PACSIN1-207ENST00000620693 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
PACSIN1-207ENST00000620693 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
PACSIN1-207ENST00000620693 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
PACSIN1-207ENST00000620693 PLIN1O60240 522 aa16.61■□□□□ 0.25
PACSIN1-207ENST00000620693 BECN1Q14457 450 aa16.61■□□□□ 0.25
PACSIN1-207ENST00000620693 URB2Q14146 1524 aaKnown RBP16.61■□□□□ 0.25
PACSIN1-207ENST00000620693 ARID3AQ99856 593 aa16.61■□□□□ 0.25
PACSIN1-207ENST00000620693 FRAT1Q92837 279 aaPredicted RBP16.6■□□□□ 0.25
PACSIN1-207ENST00000620693 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
PACSIN1-207ENST00000620693 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
PACSIN1-207ENST00000620693 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
PACSIN1-207ENST00000620693 NFKBIBQ15653 356 aa16.59■□□□□ 0.25
PACSIN1-207ENST00000620693 DNMBPQ6XZF7 1577 aa16.57■□□□□ 0.24
PACSIN1-207ENST00000620693 PKNOX2Q96KN3 472 aa16.57■□□□□ 0.24
PACSIN1-207ENST00000620693 PHLDB1Q86UU1 1377 aa16.55■□□□□ 0.24
PACSIN1-207ENST00000620693 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
PACSIN1-207ENST00000620693 WDR43Q15061 677 aaKnown RBP eCLIP16.55■□□□□ 0.24
PACSIN1-207ENST00000620693 L3MBTL2Q969R5 705 aa16.55■□□□□ 0.24
PACSIN1-207ENST00000620693 FMN1Q68DA7 1419 aa16.54■□□□□ 0.24
PACSIN1-207ENST00000620693 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
PACSIN1-207ENST00000620693 CFDP1Q9UEE9 299 aaPredicted RBP16.53■□□□□ 0.24
PACSIN1-207ENST00000620693 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
PACSIN1-207ENST00000620693 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
PACSIN1-207ENST00000620693 PLEKHD1A6NEE1 506 aa16.52■□□□□ 0.24
PACSIN1-207ENST00000620693 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.24
PACSIN1-207ENST00000620693 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
PACSIN1-207ENST00000620693 SKAP1Q86WV1 359 aa16.51■□□□□ 0.23
PACSIN1-207ENST00000620693 CARD11Q9BXL7 1154 aa16.51■□□□□ 0.23
PACSIN1-207ENST00000620693 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
PACSIN1-207ENST00000620693 L1TD1Q5T7N2 865 aaKnown RBP16.49■□□□□ 0.23
PACSIN1-207ENST00000620693 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
PACSIN1-207ENST00000620693 UBE2Q2Q8WVN8 375 aa16.48■□□□□ 0.23
PACSIN1-207ENST00000620693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.23
PACSIN1-207ENST00000620693 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
PACSIN1-207ENST00000620693 RRP1P56182 461 aaKnown RBP16.47■□□□□ 0.23
PACSIN1-207ENST00000620693 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
PACSIN1-207ENST00000620693 RGL3Q3MIN7 710 aa16.46■□□□□ 0.23
PACSIN1-207ENST00000620693 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.22
PACSIN1-207ENST00000620693 NCLP19338 710 aaKnown RBP16.45■□□□□ 0.22
PACSIN1-207ENST00000620693 ZBTB7CA1YPR0 619 aa16.45■□□□□ 0.22
PACSIN1-207ENST00000620693 LRRC9Q6ZRR7 1453 aa16.44■□□□□ 0.22
PACSIN1-207ENST00000620693 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
PACSIN1-207ENST00000620693 ZNF644Q9H582 1327 aaPredicted RBP16.43■□□□□ 0.22
PACSIN1-207ENST00000620693 NEUROD2Q15784 382 aa16.43■□□□□ 0.22
PACSIN1-207ENST00000620693 TSPY4P0CV99 314 aa16.42■□□□□ 0.22
PACSIN1-207ENST00000620693 TSPY10P0CW01 314 aa16.42■□□□□ 0.22
PACSIN1-207ENST00000620693 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
PACSIN1-207ENST00000620693 MPHOSPH9Q99550 1183 aa16.4■□□□□ 0.22
PACSIN1-207ENST00000620693 GRIN2BQ13224 1484 aa16.39■□□□□ 0.21
PACSIN1-207ENST00000620693 BACH2Q9BYV9 841 aa16.39■□□□□ 0.21
PACSIN1-207ENST00000620693 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
PACSIN1-207ENST00000620693 MS4A1P11836 297 aa16.36■□□□□ 0.21
PACSIN1-207ENST00000620693 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
PACSIN1-207ENST00000620693 TPRNQ4KMQ1 711 aa16.35■□□□□ 0.21
PACSIN1-207ENST00000620693 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
PACSIN1-207ENST00000620693 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
PACSIN1-207ENST00000620693 CDCA7LQ96GN5 454 aa16.33■□□□□ 0.21
PACSIN1-207ENST00000620693 MYH16Q9H6N6 1097 aa16.33■□□□□ 0.2
PACSIN1-207ENST00000620693 KIF7Q2M1P5 1343 aa16.33■□□□□ 0.2
PACSIN1-207ENST00000620693 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.2
PACSIN1-207ENST00000620693 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
PACSIN1-207ENST00000620693 DNTTIP2Q5QJE6 756 aaKnown RBP16.32■□□□□ 0.2
PACSIN1-207ENST00000620693 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
PACSIN1-207ENST00000620693 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
PACSIN1-207ENST00000620693 TIAM1Q13009 1591 aa16.31■□□□□ 0.2
PACSIN1-207ENST00000620693 PCF11O94913 1555 aaKnown RBP16.31■□□□□ 0.2
PACSIN1-207ENST00000620693 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
PACSIN1-207ENST00000620693 HNRNPMP52272 730 aaKnown RBP eCLIP16.31■□□□□ 0.2
PACSIN1-207ENST00000620693 DCAF11Q8TEB1 546 aa16.31■□□□□ 0.2
PACSIN1-207ENST00000620693 IFT140Q96RY7 1462 aa16.3■□□□□ 0.2
PACSIN1-207ENST00000620693 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
PACSIN1-207ENST00000620693 FGD6Q6ZV73 1430 aa16.3■□□□□ 0.2
PACSIN1-207ENST00000620693 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
PACSIN1-207ENST00000620693 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
PACSIN1-207ENST00000620693 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
PACSIN1-207ENST00000620693 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
PACSIN1-207ENST00000620693 NCOA2Q15596 1464 aa16.27■□□□□ 0.2
PACSIN1-207ENST00000620693 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
PACSIN1-207ENST00000620693 POGKQ9P215 609 aa16.27■□□□□ 0.2
PACSIN1-207ENST00000620693 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.19
PACSIN1-207ENST00000620693 GOLGA6L22H0YM25 854 aa16.26■□□□□ 0.19
PACSIN1-207ENST00000620693 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
PACSIN1-207ENST00000620693 KNSTRNQ9Y448 316 aa16.26■□□□□ 0.19
PACSIN1-207ENST00000620693 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
PACSIN1-207ENST00000620693 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
PACSIN1-207ENST00000620693 ZMYND15Q9H091 742 aa16.25■□□□□ 0.19
PACSIN1-207ENST00000620693 CDK13Q14004 1512 aaKnown RBP16.25■□□□□ 0.19
PACSIN1-207ENST00000620693 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
PACSIN1-207ENST00000620693 TNNT2P45379 298 aaPredicted RBP16.24■□□□□ 0.19
PACSIN1-207ENST00000620693 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
PACSIN1-207ENST00000620693 CENPQQ7L2Z9 268 aaPredicted RBP16.23■□□□□ 0.19
PACSIN1-207ENST00000620693 HSCBQ8IWL3 235 aa16.23■□□□□ 0.19
PACSIN1-207ENST00000620693 ST20-MTHFSA0A0A6YYL1 179 aa16.22■□□□□ 0.19
PACSIN1-207ENST00000620693 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
PACSIN1-207ENST00000620693 NLRP13Q86W25 1043 aa16.22■□□□□ 0.19
PACSIN1-207ENST00000620693 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
PACSIN1-207ENST00000620693 CCDC146Q8IYE0 955 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms