RNA–Protein interactions for RNA: ENST00000619773.1

HSDL1-208, Transcript of hydroxysteroid dehydrogenase like 1, human

Gene HSDL1, Length 3,059 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HSDL1-208	ENST00000619773	EIF5B	O60841	1220 aa	Known RBP	11.39	□□□□□ -0.59
HSDL1-208	ENST00000619773	EXOC6	Q8TAG9	804 aa		11.38	□□□□□ -0.59
HSDL1-208	ENST00000619773	FMN1	Q68DA7	1419 aa		11.37	□□□□□ -0.59
HSDL1-208	ENST00000619773	MRC2	Q9UBG0	1479 aa		11.37	□□□□□ -0.59
HSDL1-208	ENST00000619773	SLC4A3	P48751	1232 aa		11.37	□□□□□ -0.59
HSDL1-208	ENST00000619773	NCOA2	Q15596	1464 aa		11.37	□□□□□ -0.59
HSDL1-208	ENST00000619773	PBRM1	Q86U86	1689 aa		11.37	□□□□□ -0.59
HSDL1-208	ENST00000619773	MPHOSPH9	Q99550	1183 aa		11.36	□□□□□ -0.59
HSDL1-208	ENST00000619773	NCOA1	Q15788	1441 aa		11.35	□□□□□ -0.59
HSDL1-208	ENST00000619773	FGD5	Q6ZNL6	1462 aa		11.35	□□□□□ -0.59
HSDL1-208	ENST00000619773	SMG6	Q86US8	1419 aa	Known RBP	11.34	□□□□□ -0.59
HSDL1-208	ENST00000619773	PDE4A	P27815	886 aa		11.34	□□□□□ -0.59
HSDL1-208	ENST00000619773	PDS5B	Q9NTI5	1447 aa		11.34	□□□□□ -0.59
HSDL1-208	ENST00000619773	TMC1	Q8TDI8	760 aa		11.34	□□□□□ -0.59
HSDL1-208	ENST00000619773	CASKIN1	Q8WXD9	1431 aa		11.33	□□□□□ -0.6
HSDL1-208	ENST00000619773	FYCO1	Q9BQS8	1478 aa		11.33	□□□□□ -0.6
HSDL1-208	ENST00000619773	DENND4B	O75064	1496 aa	Predicted RBP	11.32	□□□□□ -0.6
HSDL1-208	ENST00000619773	ABCA10	Q8WWZ4	1543 aa		11.32	□□□□□ -0.6
HSDL1-208	ENST00000619773	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
HSDL1-208	ENST00000619773	PLIN1	O60240	522 aa		11.31	□□□□□ -0.6
HSDL1-208	ENST00000619773	KDM6B	O15054	1643 aa		11.31	□□□□□ -0.6
HSDL1-208	ENST00000619773	MYOM3	Q5VTT5	1437 aa		11.3	□□□□□ -0.6
HSDL1-208	ENST00000619773	RAD54L2	Q9Y4B4	1467 aa		11.29	□□□□□ -0.6
HSDL1-208	ENST00000619773	RRP1	P56182	461 aa	Known RBP	11.29	□□□□□ -0.6
HSDL1-208	ENST00000619773	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.28	□□□□□ -0.6
HSDL1-208	ENST00000619773	NES	P48681	1621 aa		11.28	□□□□□ -0.6
HSDL1-208	ENST00000619773	RNF123	Q5XPI4	1314 aa		11.28	□□□□□ -0.6
HSDL1-208	ENST00000619773	BACH2	Q9BYV9	841 aa		11.27	□□□□□ -0.61
HSDL1-208	ENST00000619773	PNISR	Q8TF01	805 aa	Known RBP	11.26	□□□□□ -0.61
HSDL1-208	ENST00000619773	TOPBP1	Q92547	1522 aa		11.26	□□□□□ -0.61
HSDL1-208	ENST00000619773	FANCD2	Q9BXW9	1451 aa		11.26	□□□□□ -0.61
HSDL1-208	ENST00000619773	RCAN3	Q9UKA8	241 aa		11.26	□□□□□ -0.61
HSDL1-208	ENST00000619773	DHX29	Q7Z478	1369 aa	Known RBP	11.25	□□□□□ -0.61
HSDL1-208	ENST00000619773	TCERG1	O14776	1098 aa	Known RBP	11.25	□□□□□ -0.61
HSDL1-208	ENST00000619773	FRAT1	Q92837	279 aa	Predicted RBP	11.25	□□□□□ -0.61
HSDL1-208	ENST00000619773	CDCA7L	Q96GN5	454 aa		11.25	□□□□□ -0.61
HSDL1-208	ENST00000619773	SHROOM2	Q13796	1616 aa		11.25	□□□□□ -0.61
HSDL1-208	ENST00000619773	URB2	Q14146	1524 aa	Known RBP	11.25	□□□□□ -0.61
HSDL1-208	ENST00000619773	PPM1G	O15355	546 aa	Predicted RBP	11.24	□□□□□ -0.61
HSDL1-208	ENST00000619773	NFKBIB	Q15653	356 aa		11.24	□□□□□ -0.61
HSDL1-208	ENST00000619773	IFT140	Q96RY7	1462 aa		11.24	□□□□□ -0.61
HSDL1-208	ENST00000619773	GSE1	Q14687	1217 aa		11.24	□□□□□ -0.61
HSDL1-208	ENST00000619773	SNAPC4	Q5SXM2	1469 aa		11.23	□□□□□ -0.61
HSDL1-208	ENST00000619773	DAXX	Q9UER7	740 aa	Predicted RBP	11.23	□□□□□ -0.61
HSDL1-208	ENST00000619773	KDM2A	Q9Y2K7	1162 aa		11.22	□□□□□ -0.61
HSDL1-208	ENST00000619773	WASHC2C	Q9Y4E1	1318 aa		11.22	□□□□□ -0.61
HSDL1-208	ENST00000619773	USP47	Q96K76	1375 aa		11.22	□□□□□ -0.61
HSDL1-208	ENST00000619773	ZNF644	Q9H582	1327 aa	Predicted RBP	11.22	□□□□□ -0.61
HSDL1-208	ENST00000619773	USP35	Q9P2H5	1018 aa		11.21	□□□□□ -0.61
HSDL1-208	ENST00000619773	CTTNBP2	Q8WZ74	1663 aa		11.21	□□□□□ -0.61
HSDL1-208	ENST00000619773	ARX	Q96QS3	562 aa		11.21	□□□□□ -0.62
HSDL1-208	ENST00000619773	CRBN	Q96SW2	442 aa		11.21	□□□□□ -0.62
HSDL1-208	ENST00000619773	SPATA31E1	Q6ZUB1	1445 aa		11.2	□□□□□ -0.62
HSDL1-208	ENST00000619773	LRRIQ1	Q96JM4	1722 aa		11.2	□□□□□ -0.62
HSDL1-208	ENST00000619773	ADAMTS12	P58397	1594 aa		11.2	□□□□□ -0.62
HSDL1-208	ENST00000619773	ANKRD30B	Q9BXX2	1392 aa		11.2	□□□□□ -0.62
HSDL1-208	ENST00000619773	MAGI3	Q5TCQ9	1506 aa		11.19	□□□□□ -0.62
HSDL1-208	ENST00000619773	EFCAB5	A4FU69	1503 aa		11.19	□□□□□ -0.62
HSDL1-208	ENST00000619773	HECW1	Q76N89	1606 aa		11.18	□□□□□ -0.62
HSDL1-208	ENST00000619773	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.18	□□□□□ -0.62
HSDL1-208	ENST00000619773	TEX14	Q8IWB6	1497 aa		11.18	□□□□□ -0.62
HSDL1-208	ENST00000619773	FRAT2	O75474	233 aa	Predicted RBP	11.18	□□□□□ -0.62
HSDL1-208	ENST00000619773	C20orf194	Q5TEA3	1177 aa		11.18	□□□□□ -0.62
HSDL1-208	ENST00000619773	RPRD2	Q5VT52	1461 aa	Known RBP	11.18	□□□□□ -0.62
HSDL1-208	ENST00000619773	TDRD9	Q8NDG6	1382 aa	Known RBP	11.17	□□□□□ -0.62
HSDL1-208	ENST00000619773	RGS3	P49796	1198 aa		11.17	□□□□□ -0.62
HSDL1-208	ENST00000619773	CARD11	Q9BXL7	1154 aa		11.17	□□□□□ -0.62
HSDL1-208	ENST00000619773	BCORL1	Q5H9F3	1711 aa		11.16	□□□□□ -0.62
HSDL1-208	ENST00000619773	UBE2Q2	Q8WVN8	375 aa		11.16	□□□□□ -0.62
HSDL1-208	ENST00000619773	EIF4G3	O43432	1585 aa	Known RBP	11.15	□□□□□ -0.62
HSDL1-208	ENST00000619773	ST20-MTHFS	A0A0A6YYL1	179 aa		11.15	□□□□□ -0.62
HSDL1-208	ENST00000619773	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.15	□□□□□ -0.62
HSDL1-208	ENST00000619773	CC2D1B	Q5T0F9	858 aa	Known RBP	11.15	□□□□□ -0.62
HSDL1-208	ENST00000619773	DDRGK1	Q96HY6	314 aa		11.15	□□□□□ -0.62
HSDL1-208	ENST00000619773	UGGT2	Q9NYU1	1516 aa		11.15	□□□□□ -0.62
HSDL1-208	ENST00000619773	EHBP1L1	Q8N3D4	1523 aa		11.14	□□□□□ -0.63
HSDL1-208	ENST00000619773	MS4A1	P11836	297 aa		11.14	□□□□□ -0.63
HSDL1-208	ENST00000619773	GRIN2B	Q13224	1484 aa		11.14	□□□□□ -0.63
HSDL1-208	ENST00000619773	DCAF11	Q8TEB1	546 aa		11.14	□□□□□ -0.63
HSDL1-208	ENST00000619773	PKD2	Q13563	968 aa		11.13	□□□□□ -0.63
HSDL1-208	ENST00000619773	CDK13	Q14004	1512 aa	Known RBP	11.13	□□□□□ -0.63
HSDL1-208	ENST00000619773	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.13	□□□□□ -0.63
HSDL1-208	ENST00000619773	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.13	□□□□□ -0.63
HSDL1-208	ENST00000619773	GCC2	Q8IWJ2	1684 aa		11.13	□□□□□ -0.63
HSDL1-208	ENST00000619773	POLA1	P09884	1462 aa	Predicted RBP	11.12	□□□□□ -0.63
HSDL1-208	ENST00000619773	ERCC6	Q03468	1493 aa		11.12	□□□□□ -0.63
HSDL1-208	ENST00000619773	KIF15	Q9NS87	1388 aa		11.12	□□□□□ -0.63
HSDL1-208	ENST00000619773	CLASP1	Q7Z460	1538 aa		11.1	□□□□□ -0.63
HSDL1-208	ENST00000619773	MIA2	Q96PC5	1412 aa		11.09	□□□□□ -0.63
HSDL1-208	ENST00000619773	LRPPRC	P42704	1394 aa	Known RBP	11.09	□□□□□ -0.63
HSDL1-208	ENST00000619773	SLK	Q9H2G2	1235 aa	Predicted RBP	11.08	□□□□□ -0.64
HSDL1-208	ENST00000619773	BRD4	O60885	1362 aa	Predicted RBP	11.08	□□□□□ -0.64
HSDL1-208	ENST00000619773	TCOF1	Q13428	1488 aa	Known RBP	11.07	□□□□□ -0.64
HSDL1-208	ENST00000619773	POGK	Q9P215	609 aa		11.07	□□□□□ -0.64
HSDL1-208	ENST00000619773	DAPK1	P53355	1430 aa		11.07	□□□□□ -0.64
HSDL1-208	ENST00000619773	SAMD9	Q5K651	1589 aa		11.07	□□□□□ -0.64
HSDL1-208	ENST00000619773	NLRP13	Q86W25	1043 aa		11.07	□□□□□ -0.64
HSDL1-208	ENST00000619773	POLR1A	O95602	1720 aa	Predicted RBP	11.06	□□□□□ -0.64
HSDL1-208	ENST00000619773	RALBP1	Q15311	655 aa		11.06	□□□□□ -0.64
HSDL1-208	ENST00000619773	ABCC5	O15440	1437 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms