RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 HSP90AB1P08238 724 aaKnown RBP6.1□□□□□ -1.43
ATP13A3-211ENST00000619199 GNL2Q13823 731 aaKnown RBP6.1□□□□□ -1.43
ATP13A3-211ENST00000619199 A0A0U1RQG5 324 aaPredicted RBP6.1□□□□□ -1.43
ATP13A3-211ENST00000619199 SETQ01105 290 aaPredicted RBP6.1□□□□□ -1.43
ATP13A3-211ENST00000619199 CALRP27797 417 aaKnown RBP6.09□□□□□ -1.43
ATP13A3-211ENST00000619199 PLCB2Q00722 1185 aa6.09□□□□□ -1.43
ATP13A3-211ENST00000619199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.09□□□□□ -1.436e-6■□□□□ 8.2
ATP13A3-211ENST00000619199 TNNT3P45378 269 aaPredicted RBP6.08□□□□□ -1.44
ATP13A3-211ENST00000619199 SYAP1Q96A49 352 aaPredicted RBP6.08□□□□□ -1.44
ATP13A3-211ENST00000619199 KNSTRNQ9Y448 316 aa6.08□□□□□ -1.44
ATP13A3-211ENST00000619199 CSPP1Q1MSJ5 1256 aa6.08□□□□□ -1.44
ATP13A3-211ENST00000619199 DRC7Q8IY82 874 aa6.08□□□□□ -1.44
ATP13A3-211ENST00000619199 NOP58Q9Y2X3 529 aaKnown RBP6.08□□□□□ -1.44
ATP13A3-211ENST00000619199 SMARCA2P51531 1590 aa6.08□□□□□ -1.44
ATP13A3-211ENST00000619199 HSCBQ8IWL3 235 aa6.08□□□□□ -1.44
ATP13A3-211ENST00000619199 NAP1L2Q9ULW6 460 aaPredicted RBP6.07□□□□□ -1.44
ATP13A3-211ENST00000619199 RAB3GAP2Q9H2M9 1393 aa6.07□□□□□ -1.44
ATP13A3-211ENST00000619199 ISY1Q9ULR0 285 aaKnown RBP6.07□□□□□ -1.44
ATP13A3-211ENST00000619199 SALL2Q9Y467 1007 aaPredicted RBP6.07□□□□□ -1.44
ATP13A3-211ENST00000619199 P3H3Q8IVL6 736 aa6.06□□□□□ -1.44
ATP13A3-211ENST00000619199 TPM3P06753 285 aa6.06□□□□□ -1.44
ATP13A3-211ENST00000619199 CALD1Q05682 793 aaKnown RBP6.06□□□□□ -1.44
ATP13A3-211ENST00000619199 RAPGEF2Q9Y4G8 1499 aa6.06□□□□□ -1.44
ATP13A3-211ENST00000619199 KANK4Q5T7N3 995 aaPredicted RBP6.05□□□□□ -1.44
ATP13A3-211ENST00000619199 KIAA1211Q6ZU35 1233 aa6.05□□□□□ -1.44
ATP13A3-211ENST00000619199 KIF3AQ9Y496 699 aa6.05□□□□□ -1.44
ATP13A3-211ENST00000619199 SETD5Q9C0A6 1442 aa6.05□□□□□ -1.44
ATP13A3-211ENST00000619199 ARID3CA6NKF2 412 aa6.05□□□□□ -1.44
ATP13A3-211ENST00000619199 MTUS2Q5JR59 1369 aa6.04□□□□□ -1.44
ATP13A3-211ENST00000619199 CCDC70Q6NSX1 233 aa6.04□□□□□ -1.44
ATP13A3-211ENST00000619199 GBP4Q96PP9 640 aa6.04□□□□□ -1.44
ATP13A3-211ENST00000619199 PDIA4P13667 645 aaKnown RBP6.04□□□□□ -1.44
ATP13A3-211ENST00000619199 PKNOX2Q96KN3 472 aa6.03□□□□□ -1.44
ATP13A3-211ENST00000619199 POGKQ9P215 609 aa6.03□□□□□ -1.44
ATP13A3-211ENST00000619199 PDE4CQ08493 712 aa6.03□□□□□ -1.44
ATP13A3-211ENST00000619199 GPATCH3Q96I76 525 aa6.03□□□□□ -1.44
ATP13A3-211ENST00000619199 KDM2AQ9Y2K7 1162 aa6.03□□□□□ -1.44
ATP13A3-211ENST00000619199 IPO8O15397 1037 aaKnown RBP6.02□□□□□ -1.44
ATP13A3-211ENST00000619199 TPM2P07951 284 aa6.02□□□□□ -1.44
ATP13A3-211ENST00000619199 GPS2Q13227 327 aa6.02□□□□□ -1.44
ATP13A3-211ENST00000619199 PLEKHD1A6NEE1 506 aa6.02□□□□□ -1.45
ATP13A3-211ENST00000619199 ERICH3Q5RHP9 1530 aa6.02□□□□□ -1.45
ATP13A3-211ENST00000619199 SMARCA4P51532 1647 aa6.02□□□□□ -1.45
ATP13A3-211ENST00000619199 IPO9Q96P70 1041 aaKnown RBP6.02□□□□□ -1.45
ATP13A3-211ENST00000619199 CDR1P51861 262 aa6.02□□□□□ -1.45
ATP13A3-211ENST00000619199 SIN3AQ96ST3 1273 aa6.02□□□□□ -1.45
ATP13A3-211ENST00000619199 TSR1Q2NL82 804 aaKnown RBP6.01□□□□□ -1.45
ATP13A3-211ENST00000619199 PRXQ9BXM0 1461 aa6.01□□□□□ -1.45
ATP13A3-211ENST00000619199 RTF1Q92541 710 aaKnown RBP6.01□□□□□ -1.45
ATP13A3-211ENST00000619199 HMMRO75330 724 aa6.01□□□□□ -1.45
ATP13A3-211ENST00000619199 RRP12Q5JTH9 1297 aaKnown RBP6.01□□□□□ -1.45
ATP13A3-211ENST00000619199 CHMP7Q8WUX9 453 aaPredicted RBP6.01□□□□□ -1.45
ATP13A3-211ENST00000619199 PHF14O94880 888 aa6□□□□□ -1.45
ATP13A3-211ENST00000619199 G3V3G9 751 aa6□□□□□ -1.45
ATP13A3-211ENST00000619199 TPM1P09493 284 aa6□□□□□ -1.45
ATP13A3-211ENST00000619199 IRX6P78412 446 aaPredicted RBP6□□□□□ -1.45
ATP13A3-211ENST00000619199 DCAF8Q5TAQ9 597 aa6□□□□□ -1.45
ATP13A3-211ENST00000619199 LMOD2Q6P5Q4 547 aa6□□□□□ -1.45
ATP13A3-211ENST00000619199 PABPN1Q86U42 306 aaKnown RBP eCLIP6□□□□□ -1.45
ATP13A3-211ENST00000619199 B4GALNT3Q6L9W6 998 aa6□□□□□ -1.45
ATP13A3-211ENST00000619199 ZBED9Q6R2W3 1325 aa5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 KANK1Q14678 1352 aa5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 RASSF8Q8NHQ8 419 aa5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 WDR97A6NE52 1622 aa5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 C11orf95C9JLR9 678 aaPredicted RBP5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 CCDC47Q96A33 483 aaKnown RBP5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 LAS1LQ9Y4W2 734 aaKnown RBP5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 MAP3K1Q13233 1512 aa5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 MAPKBP1O60336 1514 aa5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 MARCH6O60337 910 aa5.99□□□□□ -1.45
ATP13A3-211ENST00000619199 ARAP1Q96P48 1450 aa5.98□□□□□ -1.45
ATP13A3-211ENST00000619199 RDXP35241 583 aaKnown RBP5.98□□□□□ -1.45
ATP13A3-211ENST00000619199 LRRFIP1Q32MZ4 808 aaKnown RBP5.98□□□□□ -1.45
ATP13A3-211ENST00000619199 KIF27Q86VH2 1401 aa5.98□□□□□ -1.45
ATP13A3-211ENST00000619199 WWC1Q8IX03 1113 aa5.98□□□□□ -1.45
ATP13A3-211ENST00000619199 HIRIP3Q9BW71 556 aaPredicted RBP5.98□□□□□ -1.45
ATP13A3-211ENST00000619199 PAK3O75914 559 aaPredicted RBP5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 HSP90B1P14625 803 aaKnown RBP5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 GORABQ5T7V8 394 aa5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 FHAD1B1AJZ9 1412 aa5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 FBXO3Q9UK99 471 aa5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 TCERG1O14776 1098 aaKnown RBP5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 CHIC2Q9UKJ5 165 aa5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 SYNJ1O43426 1573 aa5.97□□□□□ -1.45
ATP13A3-211ENST00000619199 UBE2Q2Q8WVN8 375 aa5.96□□□□□ -1.46
ATP13A3-211ENST00000619199 IPO7O95373 1038 aaKnown RBP5.96□□□□□ -1.46
ATP13A3-211ENST00000619199 AMOTL1Q8IY63 956 aa5.96□□□□□ -1.46
ATP13A3-211ENST00000619199 CNKSR2Q8WXI2 1034 aa5.96□□□□□ -1.46
ATP13A3-211ENST00000619199 TCEAL9Q9UHQ7 104 aa5.96□□□□□ -1.46
ATP13A3-211ENST00000619199 TAF7LQ5H9L4 462 aa5.96□□□□□ -1.46
ATP13A3-211ENST00000619199 ANKRD20A12PQ8NF67 263 aa5.96□□□□□ -1.46
ATP13A3-211ENST00000619199 WASHC2AQ641Q2 1341 aa5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 TMF1P82094 1093 aa5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 CTDP1Q9Y5B0 961 aaPredicted RBP5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 GOLGA6L3A6NEY3 463 aa5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 HDGFL2Q7Z4V5 671 aaPredicted RBP5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 CARD11Q9BXL7 1154 aa5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 PRKRIP1Q9H875 184 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms