RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
TMCO1-208ENST00000612311 C14orf37Q86TY3 774 aa11.19□□□□□ -0.62
TMCO1-208ENST00000612311 FRAT1Q92837 279 aaPredicted RBP11.19□□□□□ -0.62
TMCO1-208ENST00000612311 FGD6Q6ZV73 1430 aa11.19□□□□□ -0.62
TMCO1-208ENST00000612311 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
TMCO1-208ENST00000612311 U2SURPO15042 1029 aaKnown RBP11.18□□□□□ -0.62
TMCO1-208ENST00000612311 ANP32BQ92688 251 aaKnown RBP11.18□□□□□ -0.62
TMCO1-208ENST00000612311 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
TMCO1-208ENST00000612311 KIF3BO15066 747 aa11.18□□□□□ -0.62
TMCO1-208ENST00000612311 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
TMCO1-208ENST00000612311 RGS3P49796 1198 aa11.18□□□□□ -0.62
TMCO1-208ENST00000612311 BECN1Q14457 450 aa11.17□□□□□ -0.62
TMCO1-208ENST00000612311 SPAG9O60271 1321 aaKnown RBP11.17□□□□□ -0.62
TMCO1-208ENST00000612311 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
TMCO1-208ENST00000612311 SRPK2P78362 688 aaKnown RBP11.16□□□□□ -0.62
TMCO1-208ENST00000612311 PTPRGP23470 1445 aa11.16□□□□□ -0.62
TMCO1-208ENST00000612311 MYOM3Q5VTT5 1437 aa11.16□□□□□ -0.62
TMCO1-208ENST00000612311 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
TMCO1-208ENST00000612311 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
TMCO1-208ENST00000612311 LAS1LQ9Y4W2 734 aaKnown RBP11.15□□□□□ -0.62
TMCO1-208ENST00000612311 ZBTB7CA1YPR0 619 aa11.15□□□□□ -0.62
TMCO1-208ENST00000612311 RBM19Q9Y4C8 960 aaKnown RBP11.15□□□□□ -0.62
TMCO1-208ENST00000612311 ST20-MTHFSA0A0A6YYL1 179 aa11.14□□□□□ -0.63
TMCO1-208ENST00000612311 NLRP13Q86W25 1043 aa11.14□□□□□ -0.63
TMCO1-208ENST00000612311 CASKIN1Q8WXD9 1431 aa11.14□□□□□ -0.63
TMCO1-208ENST00000612311 MLECQ14165 292 aa11.14□□□□□ -0.63
TMCO1-208ENST00000612311 RCAN3Q9UKA8 241 aa11.14□□□□□ -0.63
TMCO1-208ENST00000612311 PRKRIP1Q9H875 184 aaPredicted RBP11.13□□□□□ -0.63
TMCO1-208ENST00000612311 ZNF644Q9H582 1327 aaPredicted RBP11.13□□□□□ -0.63
TMCO1-208ENST00000612311 RRBP1Q9P2E9 1410 aaKnown RBP11.12□□□□□ -0.63
TMCO1-208ENST00000612311 AQRO60306 1485 aaKnown RBP eCLIP11.12□□□□□ -0.631e-7■■■■■ 30.4
TMCO1-208ENST00000612311 TOP2BQ02880 1626 aa11.12□□□□□ -0.63
TMCO1-208ENST00000612311 ARXQ96QS3 562 aa11.12□□□□□ -0.63
TMCO1-208ENST00000612311 STK26Q9P289 416 aa11.12□□□□□ -0.63
TMCO1-208ENST00000612311 MS4A1P11836 297 aa11.12□□□□□ -0.63
TMCO1-208ENST00000612311 UACAQ9BZF9 1416 aa11.12□□□□□ -0.63
TMCO1-208ENST00000612311 PNNQ9H307 717 aaKnown RBP11.11□□□□□ -0.63
TMCO1-208ENST00000612311 NOP58Q9Y2X3 529 aaKnown RBP11.11□□□□□ -0.63
TMCO1-208ENST00000612311 CCDC144AA2RUR9 1427 aa11.11□□□□□ -0.63
TMCO1-208ENST00000612311 CUX1P39880 1505 aa11.11□□□□□ -0.63
TMCO1-208ENST00000612311 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
TMCO1-208ENST00000612311 HDGFP51858 240 aaKnown RBP11.1□□□□□ -0.63
TMCO1-208ENST00000612311 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
TMCO1-208ENST00000612311 NCOA2Q15596 1464 aa11.09□□□□□ -0.63
TMCO1-208ENST00000612311 USP47Q96K76 1375 aa11.09□□□□□ -0.63
TMCO1-208ENST00000612311 EIF3AQ14152 1382 aaKnown RBP11.08□□□□□ -0.64
TMCO1-208ENST00000612311 KIF15Q9NS87 1388 aa11.08□□□□□ -0.64
TMCO1-208ENST00000612311 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
TMCO1-208ENST00000612311 NESP48681 1621 aa11.08□□□□□ -0.64
TMCO1-208ENST00000612311 FYCO1Q9BQS8 1478 aa11.07□□□□□ -0.64
TMCO1-208ENST00000612311 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
TMCO1-208ENST00000612311 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
TMCO1-208ENST00000612311 PDE3BQ13370 1112 aa11.07□□□□□ -0.64
TMCO1-208ENST00000612311 HDGFL2Q7Z4V5 671 aaPredicted RBP11.07□□□□□ -0.64
TMCO1-208ENST00000612311 EIF5BO60841 1220 aaKnown RBP11.06□□□□□ -0.64
TMCO1-208ENST00000612311 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
TMCO1-208ENST00000612311 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
TMCO1-208ENST00000612311 PANK3Q9H999 370 aa11.05□□□□□ -0.64
TMCO1-208ENST00000612311 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
TMCO1-208ENST00000612311 TOPBP1Q92547 1522 aa11.05□□□□□ -0.64
TMCO1-208ENST00000612311 POLA1P09884 1462 aaPredicted RBP11.05□□□□□ -0.64
TMCO1-208ENST00000612311 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
TMCO1-208ENST00000612311 BICRAQ9NZM4 1560 aa11.04□□□□□ -0.64
TMCO1-208ENST00000612311 SOX12O15370 315 aa11.03□□□□□ -0.64
TMCO1-208ENST00000612311 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
TMCO1-208ENST00000612311 ZBED9Q6R2W3 1325 aa11.03□□□□□ -0.64
TMCO1-208ENST00000612311 TRAK1Q9UPV9 953 aa11.03□□□□□ -0.64
TMCO1-208ENST00000612311 TCERG1O14776 1098 aaKnown RBP11.02□□□□□ -0.64
TMCO1-208ENST00000612311 EFCAB5A4FU69 1503 aa11.02□□□□□ -0.65
TMCO1-208ENST00000612311 GOLGA6L22H0YM25 854 aa11.02□□□□□ -0.65
TMCO1-208ENST00000612311 ANKRD50Q9ULJ7 1429 aa11.02□□□□□ -0.65
TMCO1-208ENST00000612311 CCDC7Q96M83 1385 aa11.02□□□□□ -0.65
TMCO1-208ENST00000612311 KIF7Q2M1P5 1343 aa11.01□□□□□ -0.65
TMCO1-208ENST00000612311 NUTM2DQ5VT03 806 aaPredicted RBP11.01□□□□□ -0.65
TMCO1-208ENST00000612311 CASC1Q6TDU7 716 aa11.01□□□□□ -0.65
TMCO1-208ENST00000612311 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
TMCO1-208ENST00000612311 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
TMCO1-208ENST00000612311 A0A0G2JS52 829 aa10.99□□□□□ -0.65
TMCO1-208ENST00000612311 CC2D2AQ9P2K1 1620 aa10.99□□□□□ -0.65
TMCO1-208ENST00000612311 IPO8O15397 1037 aaKnown RBP10.99□□□□□ -0.65
TMCO1-208ENST00000612311 HAP1P54257 671 aaPredicted RBP10.99□□□□□ -0.65
TMCO1-208ENST00000612311 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
TMCO1-208ENST00000612311 WASHC2AQ641Q2 1341 aa10.99□□□□□ -0.65
TMCO1-208ENST00000612311 HFM1A2PYH4 1435 aa10.97□□□□□ -0.65
TMCO1-208ENST00000612311 CALD1Q05682 793 aaKnown RBP10.96□□□□□ -0.65
TMCO1-208ENST00000612311 PRDM2Q13029 1718 aa10.96□□□□□ -0.65
TMCO1-208ENST00000612311 MIA2Q96PC5 1412 aa10.96□□□□□ -0.65
TMCO1-208ENST00000612311 NCLP19338 710 aaKnown RBP10.96□□□□□ -0.65
TMCO1-208ENST00000612311 TRHP20396 242 aaPredicted RBP10.96□□□□□ -0.65
TMCO1-208ENST00000612311 CNTLNQ9NXG0 1405 aa10.96□□□□□ -0.66
TMCO1-208ENST00000612311 RWDD1Q9H446 243 aaPredicted RBP10.96□□□□□ -0.66
TMCO1-208ENST00000612311 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.66
TMCO1-208ENST00000612311 DNMBPQ6XZF7 1577 aa10.95□□□□□ -0.66
TMCO1-208ENST00000612311 CENPJQ9HC77 1338 aaPredicted RBP10.95□□□□□ -0.66
TMCO1-208ENST00000612311 MRC2Q9UBG0 1479 aa10.95□□□□□ -0.66
TMCO1-208ENST00000612311 RTF1Q92541 710 aaKnown RBP10.95□□□□□ -0.66
TMCO1-208ENST00000612311 CLUAP1Q96AJ1 413 aa10.94□□□□□ -0.66
TMCO1-208ENST00000612311 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
TMCO1-208ENST00000612311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.94□□□□□ -0.66
TMCO1-208ENST00000612311 HSP90AB1P08238 724 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms