RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
CDH4-202ENST00000611855 NEFMP07197 916 aa14.89□□□□□ -0.03
CDH4-202ENST00000611855 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
CDH4-202ENST00000611855 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
CDH4-202ENST00000611855 NCOA1Q15788 1441 aa14.88□□□□□ -0.03
CDH4-202ENST00000611855 EFCAB5A4FU69 1503 aa14.88□□□□□ -0.03
CDH4-202ENST00000611855 LRRIQ1Q96JM4 1722 aa14.86□□□□□ -0.03
CDH4-202ENST00000611855 POLA1P09884 1462 aaPredicted RBP14.85□□□□□ -0.03
CDH4-202ENST00000611855 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
CDH4-202ENST00000611855 NUDCQ9Y266 331 aa14.84□□□□□ -0.03
CDH4-202ENST00000611855 PRDM2Q13029 1718 aa14.83□□□□□ -0.04
CDH4-202ENST00000611855 MAGI3Q5TCQ9 1506 aa14.83□□□□□ -0.04
CDH4-202ENST00000611855 ZNF644Q9H582 1327 aaPredicted RBP14.82□□□□□ -0.04
CDH4-202ENST00000611855 SUPT6HQ7KZ85 1726 aaKnown RBP14.81□□□□□ -0.04
CDH4-202ENST00000611855 CTTNBP2Q8WZ74 1663 aa14.81□□□□□ -0.04
CDH4-202ENST00000611855 BRPF3Q9ULD4 1205 aa14.81□□□□□ -0.04
CDH4-202ENST00000611855 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
CDH4-202ENST00000611855 TMC1Q8TDI8 760 aa14.79□□□□□ -0.04
CDH4-202ENST00000611855 GRIN2BQ13224 1484 aa14.79□□□□□ -0.04
CDH4-202ENST00000611855 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
CDH4-202ENST00000611855 SKAP1Q86WV1 359 aa14.79□□□□□ -0.04
CDH4-202ENST00000611855 SMG6Q86US8 1419 aaKnown RBP14.78□□□□□ -0.04
CDH4-202ENST00000611855 UGGT2Q9NYU1 1516 aa14.77□□□□□ -0.05
CDH4-202ENST00000611855 EXOC6Q8TAG9 804 aa14.77□□□□□ -0.05
CDH4-202ENST00000611855 EHBP1L1Q8N3D4 1523 aa14.76□□□□□ -0.05
CDH4-202ENST00000611855 ANKRD30BQ9BXX2 1392 aa14.76□□□□□ -0.05
CDH4-202ENST00000611855 HECW1Q76N89 1606 aa14.75□□□□□ -0.05
CDH4-202ENST00000611855 CDK13Q14004 1512 aaKnown RBP14.75□□□□□ -0.05
CDH4-202ENST00000611855 DHX29Q7Z478 1369 aaKnown RBP14.74□□□□□ -0.05
CDH4-202ENST00000611855 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
CDH4-202ENST00000611855 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
CDH4-202ENST00000611855 UBE2Q2Q8WVN8 375 aa14.73□□□□□ -0.05
CDH4-202ENST00000611855 KDM2AQ9Y2K7 1162 aa14.73□□□□□ -0.05
CDH4-202ENST00000611855 SPATA31E1Q6ZUB1 1445 aa14.73□□□□□ -0.05
CDH4-202ENST00000611855 PNISRQ8TF01 805 aaKnown RBP14.72□□□□□ -0.05
CDH4-202ENST00000611855 ZNF777Q9ULD5 760 aaPredicted RBP14.72□□□□□ -0.05
CDH4-202ENST00000611855 USP47Q96K76 1375 aa14.72□□□□□ -0.05
CDH4-202ENST00000611855 CUL7Q14999 1698 aa14.72□□□□□ -0.05
CDH4-202ENST00000611855 RPRD2Q5VT52 1461 aaKnown RBP14.72□□□□□ -0.05
CDH4-202ENST00000611855 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
CDH4-202ENST00000611855 GCC2Q8IWJ2 1684 aa14.71□□□□□ -0.05
CDH4-202ENST00000611855 SAMD9Q5K651 1589 aa14.7□□□□□ -0.06
CDH4-202ENST00000611855 PLIN1O60240 522 aa14.69□□□□□ -0.06
CDH4-202ENST00000611855 RNF123Q5XPI4 1314 aa14.69□□□□□ -0.06
CDH4-202ENST00000611855 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
CDH4-202ENST00000611855 SLC4A3P48751 1232 aa14.68□□□□□ -0.06
CDH4-202ENST00000611855 PDE4AP27815 886 aa14.68□□□□□ -0.06
CDH4-202ENST00000611855 RRP1P56182 461 aaKnown RBP14.68□□□□□ -0.06
CDH4-202ENST00000611855 GAPVD1Q14C86 1478 aa14.67□□□□□ -0.06
CDH4-202ENST00000611855 TCOF1Q13428 1488 aaKnown RBP14.67□□□□□ -0.06
CDH4-202ENST00000611855 PKD2Q13563 968 aa14.66□□□□□ -0.06
CDH4-202ENST00000611855 LAMC3Q9Y6N6 1575 aa14.66□□□□□ -0.06
CDH4-202ENST00000611855 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
CDH4-202ENST00000611855 EPRSP07814 1512 aaKnown RBP14.66□□□□□ -0.06
CDH4-202ENST00000611855 CDCA7LQ96GN5 454 aa14.66□□□□□ -0.06
CDH4-202ENST00000611855 CARD11Q9BXL7 1154 aa14.66□□□□□ -0.06
CDH4-202ENST00000611855 BCORL1Q5H9F3 1711 aa14.66□□□□□ -0.06
CDH4-202ENST00000611855 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
CDH4-202ENST00000611855 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
CDH4-202ENST00000611855 PPM1GO15355 546 aaPredicted RBP14.65□□□□□ -0.06
CDH4-202ENST00000611855 RCAN3Q9UKA8 241 aa14.65□□□□□ -0.06
CDH4-202ENST00000611855 DAPK1P53355 1430 aa14.65□□□□□ -0.06
CDH4-202ENST00000611855 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
CDH4-202ENST00000611855 USP35Q9P2H5 1018 aa14.64□□□□□ -0.07
CDH4-202ENST00000611855 ABCC5O15440 1437 aa14.63□□□□□ -0.07
CDH4-202ENST00000611855 GSE1Q14687 1217 aa14.63□□□□□ -0.07
CDH4-202ENST00000611855 DAXXQ9UER7 740 aaPredicted RBP14.63□□□□□ -0.07
CDH4-202ENST00000611855 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
CDH4-202ENST00000611855 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
CDH4-202ENST00000611855 BACH2Q9BYV9 841 aa14.6□□□□□ -0.07
CDH4-202ENST00000611855 WASHC2CQ9Y4E1 1318 aa14.6□□□□□ -0.07
CDH4-202ENST00000611855 MIA2Q96PC5 1412 aa14.6□□□□□ -0.07
CDH4-202ENST00000611855 TCERG1O14776 1098 aaKnown RBP14.59□□□□□ -0.07
CDH4-202ENST00000611855 NFKBIBQ15653 356 aa14.58□□□□□ -0.07
CDH4-202ENST00000611855 CFDP1Q9UEE9 299 aaPredicted RBP14.58□□□□□ -0.08
CDH4-202ENST00000611855 CC2D1BQ5T0F9 858 aaKnown RBP14.58□□□□□ -0.08
CDH4-202ENST00000611855 DCAF11Q8TEB1 546 aa14.58□□□□□ -0.08
CDH4-202ENST00000611855 ABCA5Q8WWZ7 1642 aa14.57□□□□□ -0.08
CDH4-202ENST00000611855 PZPP20742 1482 aa14.57□□□□□ -0.08
CDH4-202ENST00000611855 MYBBP1AQ9BQG0 1328 aaKnown RBP14.56□□□□□ -0.08
CDH4-202ENST00000611855 FBLN2P98095 1184 aa14.56□□□□□ -0.08
CDH4-202ENST00000611855 CRBNQ96SW2 442 aa14.56□□□□□ -0.08
CDH4-202ENST00000611855 KIF15Q9NS87 1388 aa14.56□□□□□ -0.08
CDH4-202ENST00000611855 POLR1AO95602 1720 aaPredicted RBP14.55□□□□□ -0.08
CDH4-202ENST00000611855 C20orf194Q5TEA3 1177 aa14.54□□□□□ -0.08
CDH4-202ENST00000611855 ROCK1Q13464 1354 aa14.54□□□□□ -0.08
CDH4-202ENST00000611855 RGL3Q3MIN7 710 aa14.53□□□□□ -0.08
CDH4-202ENST00000611855 ARXQ96QS3 562 aa14.53□□□□□ -0.08
CDH4-202ENST00000611855 LRPPRCP42704 1394 aaKnown RBP14.52□□□□□ -0.08
CDH4-202ENST00000611855 KIAA1107Q9UPP5 1409 aa14.52□□□□□ -0.09
CDH4-202ENST00000611855 PRG4Q92954 1404 aaPredicted RBP14.51□□□□□ -0.09
CDH4-202ENST00000611855 NUP155O75694 1391 aa14.51□□□□□ -0.09
CDH4-202ENST00000611855 KDM5CP41229 1560 aa14.51□□□□□ -0.09
CDH4-202ENST00000611855 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
CDH4-202ENST00000611855 DDRGK1Q96HY6 314 aa14.5□□□□□ -0.09
CDH4-202ENST00000611855 WDR62O43379 1518 aa14.5□□□□□ -0.09
CDH4-202ENST00000611855 DNMT1P26358 1616 aaKnown RBP14.5□□□□□ -0.09
CDH4-202ENST00000611855 RALBP1Q15311 655 aa14.5□□□□□ -0.09
CDH4-202ENST00000611855 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
CDH4-202ENST00000611855 MRC2Q9UBG0 1479 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms