RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 ABCA10Q8WWZ4 1543 aa8.81□□□□□ -1
HDDC2-205ENST00000608456 ITGAEP38570 1179 aa8.81□□□□□ -1
HDDC2-205ENST00000608456 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
HDDC2-205ENST00000608456 SPOCK2Q92563 424 aa8.81□□□□□ -1
HDDC2-205ENST00000608456 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
HDDC2-205ENST00000608456 SPDYE1Q8NFV5 336 aaPredicted RBP8.8□□□□□ -1
HDDC2-205ENST00000608456 ZBTB47Q9UFB7 747 aaPredicted RBP8.8□□□□□ -1
HDDC2-205ENST00000608456 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
HDDC2-205ENST00000608456 PCF11O94913 1555 aaKnown RBP8.79□□□□□ -1
HDDC2-205ENST00000608456 PLEKHG5O94827 1062 aa8.79□□□□□ -1
HDDC2-205ENST00000608456 EIF4G2P78344 907 aaKnown RBP eCLIP8.79□□□□□ -1
HDDC2-205ENST00000608456 PTPN23Q9H3S7 1636 aa8.79□□□□□ -1
HDDC2-205ENST00000608456 NAIPQ13075 1403 aa8.79□□□□□ -1
HDDC2-205ENST00000608456 ARID4BQ4LE39 1312 aaPredicted RBP8.79□□□□□ -1
HDDC2-205ENST00000608456 TRIM52Q96A61 297 aa8.78□□□□□ -1
HDDC2-205ENST00000608456 BCANQ96GW7 911 aa8.78□□□□□ -1
HDDC2-205ENST00000608456 MYOM3Q5VTT5 1437 aa8.78□□□□□ -1
HDDC2-205ENST00000608456 TCOF1Q13428 1488 aaKnown RBP8.77□□□□□ -1
HDDC2-205ENST00000608456 MIA2Q96PC5 1412 aa8.77□□□□□ -1.01
HDDC2-205ENST00000608456 CNTLNQ9NXG0 1405 aa8.77□□□□□ -1.01
HDDC2-205ENST00000608456 ARHGEF11O15085 1522 aa8.76□□□□□ -1.01
HDDC2-205ENST00000608456 KDM5BQ9UGL1 1544 aa8.76□□□□□ -1.01
HDDC2-205ENST00000608456 HNRNPUQ00839 825 aaKnown RBP eCLIP8.76□□□□□ -1.01
HDDC2-205ENST00000608456 KLHL34Q8N239 644 aa8.76□□□□□ -1.01
HDDC2-205ENST00000608456 EHBP1L1Q8N3D4 1523 aa8.75□□□□□ -1.01
HDDC2-205ENST00000608456 MTUS2Q5JR59 1369 aa8.75□□□□□ -1.01
HDDC2-205ENST00000608456 DNMBPQ6XZF7 1577 aa8.75□□□□□ -1.01
HDDC2-205ENST00000608456 SNAPC4Q5SXM2 1469 aa8.75□□□□□ -1.01
HDDC2-205ENST00000608456 RNF123Q5XPI4 1314 aa8.75□□□□□ -1.01
HDDC2-205ENST00000608456 NCOA1Q15788 1441 aa8.74□□□□□ -1.01
HDDC2-205ENST00000608456 KIF21AQ7Z4S6 1674 aa8.74□□□□□ -1.01
HDDC2-205ENST00000608456 SUPT6HQ7KZ85 1726 aaKnown RBP8.74□□□□□ -1.01
HDDC2-205ENST00000608456 ROCK1Q13464 1354 aa8.73□□□□□ -1.01
HDDC2-205ENST00000608456 SAMD9Q5K651 1589 aa8.73□□□□□ -1.01
HDDC2-205ENST00000608456 HECW1Q76N89 1606 aa8.73□□□□□ -1.01
HDDC2-205ENST00000608456 CTTNBP2Q8WZ74 1663 aa8.73□□□□□ -1.01
HDDC2-205ENST00000608456 PKD2Q13563 968 aa8.73□□□□□ -1.01
HDDC2-205ENST00000608456 REM2Q8IYK8 340 aaPredicted RBP8.73□□□□□ -1.01
HDDC2-205ENST00000608456 PRKRIP1Q9H875 184 aaPredicted RBP8.73□□□□□ -1.01
HDDC2-205ENST00000608456 WASHC2AQ641Q2 1341 aa8.73□□□□□ -1.01
HDDC2-205ENST00000608456 KTN1Q86UP2 1357 aaKnown RBP8.73□□□□□ -1.01
HDDC2-205ENST00000608456 ABCA5Q8WWZ7 1642 aa8.72□□□□□ -1.01
HDDC2-205ENST00000608456 SMG6Q86US8 1419 aaKnown RBP8.72□□□□□ -1.01
HDDC2-205ENST00000608456 GRIN2BQ13224 1484 aa8.72□□□□□ -1.01
HDDC2-205ENST00000608456 GCC2Q8IWJ2 1684 aa8.72□□□□□ -1.01
HDDC2-205ENST00000608456 UGGT2Q9NYU1 1516 aa8.71□□□□□ -1.01
HDDC2-205ENST00000608456 HSPA5P11021 654 aaKnown RBP8.71□□□□□ -1.02
HDDC2-205ENST00000608456 CCDC7Q96M83 1385 aa8.71□□□□□ -1.02
HDDC2-205ENST00000608456 PTPRKQ15262 1439 aa8.71□□□□□ -1.02
HDDC2-205ENST00000608456 FHOD3Q2V2M9 1422 aa8.71□□□□□ -1.02
HDDC2-205ENST00000608456 USP35Q9P2H5 1018 aa8.7□□□□□ -1.02
HDDC2-205ENST00000608456 ROCK2O75116 1388 aaKnown RBP8.7□□□□□ -1.02
HDDC2-205ENST00000608456 SPATA31E1Q6ZUB1 1445 aa8.69□□□□□ -1.02
HDDC2-205ENST00000608456 FANCD2Q9BXW9 1451 aa8.69□□□□□ -1.02
HDDC2-205ENST00000608456 POLR1AO95602 1720 aaPredicted RBP8.68□□□□□ -1.02
HDDC2-205ENST00000608456 NOP58Q9Y2X3 529 aaKnown RBP8.68□□□□□ -1.02
HDDC2-205ENST00000608456 INSRP06213 1382 aa8.68□□□□□ -1.02
HDDC2-205ENST00000608456 RPRD2Q5VT52 1461 aaKnown RBP8.68□□□□□ -1.02
HDDC2-205ENST00000608456 TOPBP1Q92547 1522 aa8.67□□□□□ -1.02
HDDC2-205ENST00000608456 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
HDDC2-205ENST00000608456 ANKRD30BQ9BXX2 1392 aa8.67□□□□□ -1.02
HDDC2-205ENST00000608456 POLA1P09884 1462 aaPredicted RBP8.66□□□□□ -1.02
HDDC2-205ENST00000608456 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
HDDC2-205ENST00000608456 ANP32AP39687 249 aaKnown RBP8.66□□□□□ -1.02
HDDC2-205ENST00000608456 IPO9Q96P70 1041 aaKnown RBP8.66□□□□□ -1.02
HDDC2-205ENST00000608456 NUDCQ9Y266 331 aa8.66□□□□□ -1.02
HDDC2-205ENST00000608456 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
HDDC2-205ENST00000608456 MRS2Q9HD23 443 aa8.65□□□□□ -1.02
HDDC2-205ENST00000608456 MS4A1P11836 297 aa8.64□□□□□ -1.03
HDDC2-205ENST00000608456 DEKP35659 375 aaKnown RBP8.64□□□□□ -1.03
HDDC2-205ENST00000608456 PLCB2Q00722 1185 aa8.64□□□□□ -1.03
HDDC2-205ENST00000608456 CLEC11AQ9Y240 323 aa8.64□□□□□ -1.03
HDDC2-205ENST00000608456 TCERG1O14776 1098 aaKnown RBP8.63□□□□□ -1.03
HDDC2-205ENST00000608456 L3MBTL2Q969R5 705 aa8.63□□□□□ -1.03
HDDC2-205ENST00000608456 HIRIP3Q9BW71 556 aaPredicted RBP8.63□□□□□ -1.03
HDDC2-205ENST00000608456 CREBZFQ9NS37 354 aa8.63□□□□□ -1.03
HDDC2-205ENST00000608456 ATP1B4Q9UN42 357 aaPredicted RBP8.63□□□□□ -1.03
HDDC2-205ENST00000608456 ZMYM4Q5VZL5 1548 aa8.63□□□□□ -1.03
HDDC2-205ENST00000608456 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
HDDC2-205ENST00000608456 PITPNM1O00562 1244 aa8.62□□□□□ -1.03
HDDC2-205ENST00000608456 ECM2O94769 699 aaPredicted RBP8.62□□□□□ -1.03
HDDC2-205ENST00000608456 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
HDDC2-205ENST00000608456 P3H3Q8IVL6 736 aa8.61□□□□□ -1.03
HDDC2-205ENST00000608456 TEX14Q8IWB6 1497 aa8.61□□□□□ -1.03
HDDC2-205ENST00000608456 WASHC2CQ9Y4E1 1318 aa8.6□□□□□ -1.03
HDDC2-205ENST00000608456 PPM1GO15355 546 aaPredicted RBP8.6□□□□□ -1.03
HDDC2-205ENST00000608456 RALBP1Q15311 655 aa8.6□□□□□ -1.03
HDDC2-205ENST00000608456 UHRF1BP1Q6BDS2 1440 aa8.6□□□□□ -1.03
HDDC2-205ENST00000608456 LAMC3Q9Y6N6 1575 aa8.6□□□□□ -1.03
HDDC2-205ENST00000608456 BRD4O60885 1362 aaPredicted RBP8.6□□□□□ -1.03
HDDC2-205ENST00000608456 KIF7Q2M1P5 1343 aa8.59□□□□□ -1.03
HDDC2-205ENST00000608456 GAPVD1Q14C86 1478 aa8.59□□□□□ -1.03
HDDC2-205ENST00000608456 C11orf95C9JLR9 678 aaPredicted RBP8.59□□□□□ -1.03
HDDC2-205ENST00000608456 MNX1P50219 401 aaPredicted RBP8.59□□□□□ -1.03
HDDC2-205ENST00000608456 NUBP1P53384 320 aa8.59□□□□□ -1.03
HDDC2-205ENST00000608456 GSE1Q14687 1217 aa8.59□□□□□ -1.03
HDDC2-205ENST00000608456 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
HDDC2-205ENST00000608456 DHX29Q7Z478 1369 aaKnown RBP8.59□□□□□ -1.03
HDDC2-205ENST00000608456 RAD54L2Q9Y4B4 1467 aa8.58□□□□□ -1.04
HDDC2-205ENST00000608456 B4GALNT3Q6L9W6 998 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms