RNA–Protein interactions for RNA: ENST00000606296.1

SATB1-218, Transcript of SATB homeobox 1, humanhuman

Gene SATB1, Length 4,200 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-218ENST00000606296 NEFMP07197 916 aa9.74□□□□□ -0.85
SATB1-218ENST00000606296 CHGAP10645 457 aaKnown RBP9.74□□□□□ -0.85
SATB1-218ENST00000606296 ARXQ96QS3 562 aa9.74□□□□□ -0.85
SATB1-218ENST00000606296 NUP155O75694 1391 aa9.74□□□□□ -0.85
SATB1-218ENST00000606296 NAIPQ13075 1403 aa9.73□□□□□ -0.85
SATB1-218ENST00000606296 PLIN1O60240 522 aa9.73□□□□□ -0.85
SATB1-218ENST00000606296 RGS3P49796 1198 aa9.73□□□□□ -0.85
SATB1-218ENST00000606296 BIVM-ERCC5R4GMW8 1640 aa9.73□□□□□ -0.85
SATB1-218ENST00000606296 HFM1A2PYH4 1435 aa9.73□□□□□ -0.85
SATB1-218ENST00000606296 PTPRKQ15262 1439 aa9.73□□□□□ -0.85
SATB1-218ENST00000606296 CNTLNQ9NXG0 1405 aa9.73□□□□□ -0.85
SATB1-218ENST00000606296 FYCO1Q9BQS8 1478 aa9.72□□□□□ -0.85
SATB1-218ENST00000606296 RCAN3Q9UKA8 241 aa9.72□□□□□ -0.85
SATB1-218ENST00000606296 PAK3O75914 559 aaPredicted RBP9.72□□□□□ -0.85
SATB1-218ENST00000606296 EXOC6Q8TAG9 804 aa9.72□□□□□ -0.85
SATB1-218ENST00000606296 DNAJC5BQ9UF47 199 aa9.72□□□□□ -0.85
SATB1-218ENST00000606296 AKNAQ7Z591 1439 aa9.71□□□□□ -0.85
SATB1-218ENST00000606296 HNRNPMP52272 730 aaKnown RBP eCLIP9.71□□□□□ -0.85
SATB1-218ENST00000606296 USP47Q96K76 1375 aa9.71□□□□□ -0.86
SATB1-218ENST00000606296 GAPVD1Q14C86 1478 aa9.71□□□□□ -0.86
SATB1-218ENST00000606296 EIF5BO60841 1220 aaKnown RBP9.71□□□□□ -0.86
SATB1-218ENST00000606296 POLA1P09884 1462 aaPredicted RBP9.7□□□□□ -0.86
SATB1-218ENST00000606296 NEUROD2Q15784 382 aa9.7□□□□□ -0.86
SATB1-218ENST00000606296 HMGXB3Q12766 1538 aa9.7□□□□□ -0.86
SATB1-218ENST00000606296 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
SATB1-218ENST00000606296 AQRO60306 1485 aaKnown RBP eCLIP9.69□□□□□ -0.86
SATB1-218ENST00000606296 PDS5BQ9NTI5 1447 aa9.69□□□□□ -0.86
SATB1-218ENST00000606296 KNSTRNQ9Y448 316 aa9.68□□□□□ -0.86
SATB1-218ENST00000606296 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
SATB1-218ENST00000606296 ROCK2O75116 1388 aaKnown RBP9.68□□□□□ -0.86
SATB1-218ENST00000606296 SLC4A3P48751 1232 aa9.67□□□□□ -0.86
SATB1-218ENST00000606296 TOPBP1Q92547 1522 aa9.67□□□□□ -0.86
SATB1-218ENST00000606296 CDCA7LQ96GN5 454 aa9.65□□□□□ -0.86
SATB1-218ENST00000606296 ANKRD30AQ9BXX3 1397 aa9.65□□□□□ -0.86
SATB1-218ENST00000606296 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.65□□□□□ -0.86
SATB1-218ENST00000606296 KTN1Q86UP2 1357 aaKnown RBP9.65□□□□□ -0.87
SATB1-218ENST00000606296 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
SATB1-218ENST00000606296 SKAP1Q86WV1 359 aa9.64□□□□□ -0.87
SATB1-218ENST00000606296 RALBP1Q15311 655 aa9.64□□□□□ -0.87
SATB1-218ENST00000606296 MAP3K1Q13233 1512 aa9.64□□□□□ -0.87
SATB1-218ENST00000606296 NLRP13Q86W25 1043 aa9.64□□□□□ -0.87
SATB1-218ENST00000606296 CDK13Q14004 1512 aaKnown RBP9.63□□□□□ -0.87
SATB1-218ENST00000606296 PDE4AP27815 886 aa9.63□□□□□ -0.87
SATB1-218ENST00000606296 CCDC146Q8IYE0 955 aa9.63□□□□□ -0.87
SATB1-218ENST00000606296 FRAT1Q92837 279 aaPredicted RBP9.63□□□□□ -0.87
SATB1-218ENST00000606296 TMF1P82094 1093 aa9.63□□□□□ -0.87
SATB1-218ENST00000606296 PANK3Q9H999 370 aa9.63□□□□□ -0.87
SATB1-218ENST00000606296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
SATB1-218ENST00000606296 MYBBP1AQ9BQG0 1328 aaKnown RBP9.62□□□□□ -0.87
SATB1-218ENST00000606296 EFCAB5A4FU69 1503 aa9.62□□□□□ -0.87
SATB1-218ENST00000606296 TCERG1O14776 1098 aaKnown RBP9.61□□□□□ -0.87
SATB1-218ENST00000606296 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
SATB1-218ENST00000606296 CRBNQ96SW2 442 aa9.61□□□□□ -0.87
SATB1-218ENST00000606296 KIF15Q9NS87 1388 aa9.61□□□□□ -0.87
SATB1-218ENST00000606296 PNISRQ8TF01 805 aaKnown RBP9.61□□□□□ -0.87
SATB1-218ENST00000606296 DDRGK1Q96HY6 314 aa9.61□□□□□ -0.87
SATB1-218ENST00000606296 PTPN23Q9H3S7 1636 aa9.61□□□□□ -0.87
SATB1-218ENST00000606296 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
SATB1-218ENST00000606296 NBPF1Q3BBV0 1214 aa9.6□□□□□ -0.87
SATB1-218ENST00000606296 ABCA10Q8WWZ4 1543 aa9.59□□□□□ -0.87
SATB1-218ENST00000606296 CC2D2AQ9P2K1 1620 aa9.59□□□□□ -0.87
SATB1-218ENST00000606296 PRDM2Q13029 1718 aa9.58□□□□□ -0.88
SATB1-218ENST00000606296 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
SATB1-218ENST00000606296 ANKRD30BQ9BXX2 1392 aa9.58□□□□□ -0.88
SATB1-218ENST00000606296 PRG4Q92954 1404 aaPredicted RBP9.58□□□□□ -0.88
SATB1-218ENST00000606296 EHBP1L1Q8N3D4 1523 aa9.57□□□□□ -0.88
SATB1-218ENST00000606296 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
SATB1-218ENST00000606296 SUPT6HQ7KZ85 1726 aaKnown RBP9.57□□□□□ -0.88
SATB1-218ENST00000606296 NCOA1Q15788 1441 aa9.57□□□□□ -0.88
SATB1-218ENST00000606296 UPF2Q9HAU5 1272 aaKnown RBP9.57□□□□□ -0.88
SATB1-218ENST00000606296 ERCC6Q03468 1493 aa9.57□□□□□ -0.88
SATB1-218ENST00000606296 DNMBPQ6XZF7 1577 aa9.56□□□□□ -0.88
SATB1-218ENST00000606296 ANKRD50Q9ULJ7 1429 aa9.56□□□□□ -0.88
SATB1-218ENST00000606296 EPRSP07814 1512 aaKnown RBP9.56□□□□□ -0.88
SATB1-218ENST00000606296 DAPK1P53355 1430 aa9.56□□□□□ -0.88
SATB1-218ENST00000606296 SLKQ9H2G2 1235 aaPredicted RBP9.55□□□□□ -0.88
SATB1-218ENST00000606296 SMG6Q86US8 1419 aaKnown RBP9.54□□□□□ -0.88
SATB1-218ENST00000606296 PDE3BQ13370 1112 aa9.54□□□□□ -0.88
SATB1-218ENST00000606296 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
SATB1-218ENST00000606296 CARMIL2Q6F5E8 1435 aa9.53□□□□□ -0.88
SATB1-218ENST00000606296 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
SATB1-218ENST00000606296 SAFB2Q14151 953 aaKnown RBP eCLIP9.53□□□□□ -0.88
SATB1-218ENST00000606296 CCDC144AA2RUR9 1427 aa9.53□□□□□ -0.88
SATB1-218ENST00000606296 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
SATB1-218ENST00000606296 CLUAP1Q96AJ1 413 aa9.53□□□□□ -0.88
SATB1-218ENST00000606296 RRP7AQ9Y3A4 280 aaKnown RBP9.53□□□□□ -0.88
SATB1-218ENST00000606296 ABCC5O15440 1437 aa9.53□□□□□ -0.88
SATB1-218ENST00000606296 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
SATB1-218ENST00000606296 MIA2Q96PC5 1412 aa9.53□□□□□ -0.88
SATB1-218ENST00000606296 BCL2L13Q9BXK5 485 aa9.52□□□□□ -0.89
SATB1-218ENST00000606296 URB2Q14146 1524 aaKnown RBP9.52□□□□□ -0.89
SATB1-218ENST00000606296 APAF1O14727 1248 aa9.52□□□□□ -0.89
SATB1-218ENST00000606296 KIAA1107Q9UPP5 1409 aa9.52□□□□□ -0.89
SATB1-218ENST00000606296 HSP90AA1P07900 732 aaKnown RBP9.51□□□□□ -0.89
SATB1-218ENST00000606296 SNAPC4Q5SXM2 1469 aa9.51□□□□□ -0.89
SATB1-218ENST00000606296 GRIN2BQ13224 1484 aa9.5□□□□□ -0.89
SATB1-218ENST00000606296 RPRD2Q5VT52 1461 aaKnown RBP9.5□□□□□ -0.89
SATB1-218ENST00000606296 C20orf194Q5TEA3 1177 aa9.5□□□□□ -0.89
SATB1-218ENST00000606296 CFAP43Q8NDM7 1665 aa9.5□□□□□ -0.89
SATB1-218ENST00000606296 BRD4O60885 1362 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms