RNA–Protein interactions for RNA: ENST00000599373.5

DDX49-209, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-209ENST00000599373 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
DDX49-209ENST00000599373 PLEKHD1A6NEE1 506 aa27.23■■□□□ 1.95
DDX49-209ENST00000599373 EFCAB5A4FU69 1503 aa27.22■■□□□ 1.95
DDX49-209ENST00000599373 RANGAP1P46060 587 aaPredicted RBP27.22■■□□□ 1.95
DDX49-209ENST00000599373 HECW1Q76N89 1606 aa27.22■■□□□ 1.95
DDX49-209ENST00000599373 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
DDX49-209ENST00000599373 CEBPAP49715 358 aaPredicted RBP27.19■■□□□ 1.94
DDX49-209ENST00000599373 MAGI2Q86UL8 1455 aa27.17■■□□□ 1.94
DDX49-209ENST00000599373 STRCQ7RTU9 1775 aa27.17■■□□□ 1.94
DDX49-209ENST00000599373 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
DDX49-209ENST00000599373 PREX1Q8TCU6 1659 aa27.15■■□□□ 1.94
DDX49-209ENST00000599373 ARHGEF12Q9NZN5 1544 aa27.15■■□□□ 1.94
DDX49-209ENST00000599373 SCAPERQ9BY12 1400 aa27.12■■□□□ 1.93
DDX49-209ENST00000599373 ATP10AO60312 1499 aa27.08■■□□□ 1.93
DDX49-209ENST00000599373 CDK13Q14004 1512 aaKnown RBP27.06■■□□□ 1.92
DDX49-209ENST00000599373 PLCH2O75038 1416 aa27.05■■□□□ 1.92
DDX49-209ENST00000599373 SPATA31D1Q6ZQQ2 1576 aa27.05■■□□□ 1.92
DDX49-209ENST00000599373 C9orf84Q5VXU9 1444 aa27.04■■□□□ 1.92
DDX49-209ENST00000599373 DMRT2Q9Y5R5 561 aa27.03■■□□□ 1.92
DDX49-209ENST00000599373 TRIM26Q12899 539 aaPredicted RBP26.99■■□□□ 1.91
DDX49-209ENST00000599373 UHRF1BP1Q6BDS2 1440 aa26.99■■□□□ 1.91
DDX49-209ENST00000599373 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
DDX49-209ENST00000599373 CLIP1P30622 1438 aa26.96■■□□□ 1.91
DDX49-209ENST00000599373 SETD1BQ9UPS6 1966 aaKnown RBP26.95■■□□□ 1.9
DDX49-209ENST00000599373 LTBP4Q8N2S1 1624 aa26.94■■□□□ 1.9
DDX49-209ENST00000599373 PTPRTO14522 1441 aa26.93■■□□□ 1.9
DDX49-209ENST00000599373 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
DDX49-209ENST00000599373 AFAP1Q8N556 730 aa26.92■■□□□ 1.9
DDX49-209ENST00000599373 MYO5CQ9NQX4 1742 aa26.9■■□□□ 1.9
DDX49-209ENST00000599373 C3P01024 1663 aa26.89■■□□□ 1.89
DDX49-209ENST00000599373 KDM5CP41229 1560 aa26.86■■□□□ 1.89
DDX49-209ENST00000599373 DIP2CQ9Y2E4 1556 aa26.86■■□□□ 1.89
DDX49-209ENST00000599373 KIF14Q15058 1648 aa26.86■■□□□ 1.89
DDX49-209ENST00000599373 ZNF518AQ6AHZ1 1483 aa26.85■■□□□ 1.89
DDX49-209ENST00000599373 ATP1B4Q9UN42 357 aaPredicted RBP26.84■■□□□ 1.89
DDX49-209ENST00000599373 MYT1LQ9UL68 1186 aa26.81■■□□□ 1.88
DDX49-209ENST00000599373 ABCA6Q8N139 1617 aa26.8■■□□□ 1.88
DDX49-209ENST00000599373 VPS8Q8N3P4 1428 aa26.8■■□□□ 1.88
DDX49-209ENST00000599373 REREQ9P2R6 1566 aa26.79■■□□□ 1.88
DDX49-209ENST00000599373 CDK11AQ9UQ88 783 aaPredicted RBP26.78■■□□□ 1.88
DDX49-209ENST00000599373 NCOA1Q15788 1441 aa26.78■■□□□ 1.88
DDX49-209ENST00000599373 IQSEC2Q5JU85 1478 aa26.78■■□□□ 1.88
DDX49-209ENST00000599373 ARHGAP5Q13017 1502 aa26.78■■□□□ 1.88
DDX49-209ENST00000599373 TRAPPC8Q9Y2L5 1435 aa26.77■■□□□ 1.88
DDX49-209ENST00000599373 MLH3Q9UHC1 1453 aa26.72■■□□□ 1.87
DDX49-209ENST00000599373 AGLP35573 1532 aa26.71■■□□□ 1.87
DDX49-209ENST00000599373 CDC42BPBQ9Y5S2 1711 aa26.7■■□□□ 1.87
DDX49-209ENST00000599373 TROQ12816 1431 aaPredicted RBP26.7■■□□□ 1.86
DDX49-209ENST00000599373 FMN1Q68DA7 1419 aa26.7■■□□□ 1.86
DDX49-209ENST00000599373 CAMSAP1Q5T5Y3 1602 aa26.69■■□□□ 1.86
DDX49-209ENST00000599373 ESF1Q9H501 851 aaKnown RBP26.69■■□□□ 1.86
DDX49-209ENST00000599373 ZNF335Q9H4Z2 1342 aaPredicted RBP26.68■■□□□ 1.86
DDX49-209ENST00000599373 NCKAP5LQ9HCH0 1330 aa26.68■■□□□ 1.86
DDX49-209ENST00000599373 LRRIQ1Q96JM4 1722 aa26.66■■□□□ 1.86
DDX49-209ENST00000599373 UBAP1LF5GYI3 381 aa26.65■■□□□ 1.86
DDX49-209ENST00000599373 ARHGAP35Q9NRY4 1499 aa26.64■■□□□ 1.86
DDX49-209ENST00000599373 KIDINS220Q9ULH0 1771 aa26.63■■□□□ 1.85
DDX49-209ENST00000599373 ABCC1P33527 1531 aa26.62■■□□□ 1.85
DDX49-209ENST00000599373 ITSN2Q9NZM3 1697 aa26.61■■□□□ 1.85
DDX49-209ENST00000599373 CNTLNQ9NXG0 1405 aa26.61■■□□□ 1.85
DDX49-209ENST00000599373 PREX2Q70Z35 1606 aa26.57■■□□□ 1.84
DDX49-209ENST00000599373 NPATQ14207 1427 aa26.57■■□□□ 1.84
DDX49-209ENST00000599373 PPARGC1BQ86YN6 1023 aaKnown RBP26.57■■□□□ 1.84
DDX49-209ENST00000599373 ZMYM3Q14202 1370 aa26.57■■□□□ 1.84
DDX49-209ENST00000599373 MROH2AA6NES4 1674 aa26.55■■□□□ 1.84
DDX49-209ENST00000599373 HRCP23327 699 aa26.51■■□□□ 1.83
DDX49-209ENST00000599373 SAMD9LQ8IVG5 1584 aa26.5■■□□□ 1.83
DDX49-209ENST00000599373 SUPT6HQ7KZ85 1726 aaKnown RBP26.49■■□□□ 1.83
DDX49-209ENST00000599373 TCOF1Q13428 1488 aaKnown RBP26.49■■□□□ 1.83
DDX49-209ENST00000599373 MYO3AQ8NEV4 1616 aa26.48■■□□□ 1.83
DDX49-209ENST00000599373 CDC42BPAQ5VT25 1732 aa26.48■■□□□ 1.83
DDX49-209ENST00000599373 ZNF142P52746 1687 aaPredicted RBP26.47■■□□□ 1.83
DDX49-209ENST00000599373 CLTCQ00610 1675 aaKnown RBP26.47■■□□□ 1.83
DDX49-209ENST00000599373 HSPA1LP34931 641 aa26.47■■□□□ 1.83
DDX49-209ENST00000599373 PKD2Q13563 968 aa26.47■■□□□ 1.83
DDX49-209ENST00000599373 PLA2R1Q13018 1463 aa26.47■■□□□ 1.83
DDX49-209ENST00000599373 MED1Q15648 1581 aaPredicted RBP26.46■■□□□ 1.83
DDX49-209ENST00000599373 CEP170BQ9Y4F5 1589 aaPredicted RBP26.45■■□□□ 1.82
DDX49-209ENST00000599373 PTPRKQ15262 1439 aa26.44■■□□□ 1.82
DDX49-209ENST00000599373 APLP2Q06481 763 aa26.42■■□□□ 1.82
DDX49-209ENST00000599373 ZNF777Q9ULD5 760 aaPredicted RBP26.42■■□□□ 1.82
DDX49-209ENST00000599373 HNRNPMP52272 730 aaKnown RBP eCLIP26.41■■□□□ 1.82
DDX49-209ENST00000599373 PIP4K2BP78356 416 aa26.4■■□□□ 1.82
DDX49-209ENST00000599373 PPP6R1Q9UPN7 881 aa26.4■■□□□ 1.82
DDX49-209ENST00000599373 SPAG9O60271 1321 aaKnown RBP26.39■■□□□ 1.82
DDX49-209ENST00000599373 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.82
DDX49-209ENST00000599373 SYCP2Q9BX26 1530 aa26.39■■□□□ 1.82
DDX49-209ENST00000599373 PLXNC1O60486 1568 aa26.37■■□□□ 1.81
DDX49-209ENST00000599373 MAP3K1Q13233 1512 aa26.36■■□□□ 1.81
DDX49-209ENST00000599373 GGT6Q6P531 493 aa26.36■■□□□ 1.81
DDX49-209ENST00000599373 CASKIN1Q8WXD9 1431 aa26.36■■□□□ 1.81
DDX49-209ENST00000599373 ATP7AQ04656 1500 aa26.34■■□□□ 1.81
DDX49-209ENST00000599373 A2MP01023 1474 aa26.33■■□□□ 1.81
DDX49-209ENST00000599373 CCDC18Q5T9S5 1454 aa26.33■■□□□ 1.81
DDX49-209ENST00000599373 DNMT1P26358 1616 aaKnown RBP26.32■■□□□ 1.8
DDX49-209ENST00000599373 GPATCH8Q9UKJ3 1502 aaKnown RBP26.31■■□□□ 1.8
DDX49-209ENST00000599373 INO80Q9ULG1 1556 aaPredicted RBP26.31■■□□□ 1.8
DDX49-209ENST00000599373 A2ML1A8K2U0 1454 aa26.29■■□□□ 1.8
DDX49-209ENST00000599373 TOM1O60784 492 aa26.28■■□□□ 1.8
DDX49-209ENST00000599373 NEURL4Q96JN8 1562 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms