RNA–Protein interactions for RNA: ENST00000592133.5

RANBP3-225, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-225ENST00000592133 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
RANBP3-225ENST00000592133 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
RANBP3-225ENST00000592133 PREX1Q8TCU6 1659 aa20.67■□□□□ 0.9
RANBP3-225ENST00000592133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.66■□□□□ 0.97e-8■□□□□ 9
RANBP3-225ENST00000592133 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
RANBP3-225ENST00000592133 UHRF1BP1Q6BDS2 1440 aa20.65■□□□□ 0.9
RANBP3-225ENST00000592133 SCAPERQ9BY12 1400 aa20.65■□□□□ 0.9
RANBP3-225ENST00000592133 ARHGEF12Q9NZN5 1544 aa20.64■□□□□ 0.9
RANBP3-225ENST00000592133 ATP10AO60312 1499 aa20.64■□□□□ 0.89
RANBP3-225ENST00000592133 STRCQ7RTU9 1775 aa20.62■□□□□ 0.89
RANBP3-225ENST00000592133 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
RANBP3-225ENST00000592133 PTPRTO14522 1441 aa20.6■□□□□ 0.89
RANBP3-225ENST00000592133 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
RANBP3-225ENST00000592133 PLCH2O75038 1416 aa20.56■□□□□ 0.88
RANBP3-225ENST00000592133 CSRNP3Q8WYN3 585 aa20.56■□□□□ 0.88
RANBP3-225ENST00000592133 EFCAB2Q5VUJ9 269 aa20.55■□□□□ 0.88
RANBP3-225ENST00000592133 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
RANBP3-225ENST00000592133 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
RANBP3-225ENST00000592133 LTBP4Q8N2S1 1624 aa20.5■□□□□ 0.87
RANBP3-225ENST00000592133 SETD1BQ9UPS6 1966 aaKnown RBP20.5■□□□□ 0.87
RANBP3-225ENST00000592133 AFAP1Q8N556 730 aa20.48■□□□□ 0.87
RANBP3-225ENST00000592133 UBAP1LF5GYI3 381 aa20.47■□□□□ 0.87
RANBP3-225ENST00000592133 ATP1B4Q9UN42 357 aaPredicted RBP20.47■□□□□ 0.87
RANBP3-225ENST00000592133 CDK13Q14004 1512 aaKnown RBP20.47■□□□□ 0.87
RANBP3-225ENST00000592133 ZNF518AQ6AHZ1 1483 aa20.45■□□□□ 0.86
RANBP3-225ENST00000592133 TRAPPC8Q9Y2L5 1435 aa20.44■□□□□ 0.86
RANBP3-225ENST00000592133 NCOA1Q15788 1441 aa20.42■□□□□ 0.86
RANBP3-225ENST00000592133 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
RANBP3-225ENST00000592133 C3P01024 1663 aa20.4■□□□□ 0.86
RANBP3-225ENST00000592133 ZNF335Q9H4Z2 1342 aaPredicted RBP20.38■□□□□ 0.85
RANBP3-225ENST00000592133 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
RANBP3-225ENST00000592133 NCKAP5LQ9HCH0 1330 aa20.37■□□□□ 0.85
RANBP3-225ENST00000592133 DIP2CQ9Y2E4 1556 aa20.37■□□□□ 0.85
RANBP3-225ENST00000592133 ARHGAP5Q13017 1502 aa20.37■□□□□ 0.85
RANBP3-225ENST00000592133 KDM5CP41229 1560 aa20.36■□□□□ 0.85
RANBP3-225ENST00000592133 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
RANBP3-225ENST00000592133 CNTLNQ9NXG0 1405 aa20.34■□□□□ 0.85
RANBP3-225ENST00000592133 CAMSAP1Q5T5Y3 1602 aa20.34■□□□□ 0.85
RANBP3-225ENST00000592133 AGLP35573 1532 aa20.32■□□□□ 0.84
RANBP3-225ENST00000592133 MLH3Q9UHC1 1453 aa20.31■□□□□ 0.84
RANBP3-225ENST00000592133 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
RANBP3-225ENST00000592133 ABCA6Q8N139 1617 aa20.3■□□□□ 0.84
RANBP3-225ENST00000592133 KIF14Q15058 1648 aa20.29■□□□□ 0.84
RANBP3-225ENST00000592133 PKD2Q13563 968 aa20.28■□□□□ 0.84
RANBP3-225ENST00000592133 CLIP1P30622 1438 aa20.27■□□□□ 0.84
RANBP3-225ENST00000592133 NPATQ14207 1427 aa20.27■□□□□ 0.84
RANBP3-225ENST00000592133 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.83
RANBP3-225ENST00000592133 EEA1Q15075 1411 aa20.27■□□□□ 0.83
RANBP3-225ENST00000592133 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
RANBP3-225ENST00000592133 HSPA1LP34931 641 aa20.26■□□□□ 0.83
RANBP3-225ENST00000592133 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
RANBP3-225ENST00000592133 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
RANBP3-225ENST00000592133 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
RANBP3-225ENST00000592133 MED1Q15648 1581 aaPredicted RBP20.22■□□□□ 0.83
RANBP3-225ENST00000592133 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
RANBP3-225ENST00000592133 TOM1O60784 492 aa20.21■□□□□ 0.83
RANBP3-225ENST00000592133 PLA2R1Q13018 1463 aa20.19■□□□□ 0.82
RANBP3-225ENST00000592133 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
RANBP3-225ENST00000592133 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
RANBP3-225ENST00000592133 ABCC1P33527 1531 aa20.17■□□□□ 0.82
RANBP3-225ENST00000592133 MROH2AA6NES4 1674 aa20.16■□□□□ 0.82
RANBP3-225ENST00000592133 CDC42BPBQ9Y5S2 1711 aa20.16■□□□□ 0.82
RANBP3-225ENST00000592133 TCOF1Q13428 1488 aaKnown RBP20.16■□□□□ 0.82
RANBP3-225ENST00000592133 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
RANBP3-225ENST00000592133 ZNF777Q9ULD5 760 aaPredicted RBP20.14■□□□□ 0.81
RANBP3-225ENST00000592133 ITSN2Q9NZM3 1697 aa20.13■□□□□ 0.81
RANBP3-225ENST00000592133 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
RANBP3-225ENST00000592133 SPAG9O60271 1321 aaKnown RBP20.12■□□□□ 0.81
RANBP3-225ENST00000592133 GGT6Q6P531 493 aa20.12■□□□□ 0.81
RANBP3-225ENST00000592133 MYO3AQ8NEV4 1616 aa20.12■□□□□ 0.81
RANBP3-225ENST00000592133 SUPT6HQ7KZ85 1726 aaKnown RBP20.11■□□□□ 0.81
RANBP3-225ENST00000592133 PREX2Q70Z35 1606 aa20.11■□□□□ 0.81
RANBP3-225ENST00000592133 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
RANBP3-225ENST00000592133 PTPRKQ15262 1439 aa20.1■□□□□ 0.81
RANBP3-225ENST00000592133 ZNF142P52746 1687 aaPredicted RBP20.1■□□□□ 0.81
RANBP3-225ENST00000592133 CLTCQ00610 1675 aaKnown RBP20.08■□□□□ 0.81
RANBP3-225ENST00000592133 SAMD9LQ8IVG5 1584 aa20.08■□□□□ 0.8
RANBP3-225ENST00000592133 HNRNPMP52272 730 aaKnown RBP eCLIP20.07■□□□□ 0.87e-7■■■□□ 15.5
RANBP3-225ENST00000592133 CPS1P31327 1500 aa20.07■□□□□ 0.8
RANBP3-225ENST00000592133 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
RANBP3-225ENST00000592133 SHANK2Q9UPX8 1470 aa20.05■□□□□ 0.8
RANBP3-225ENST00000592133 A2ML1A8K2U0 1454 aa20.03■□□□□ 0.8
RANBP3-225ENST00000592133 A2MP01023 1474 aa20.03■□□□□ 0.8
RANBP3-225ENST00000592133 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.79
RANBP3-225ENST00000592133 SYCP2Q9BX26 1530 aa20.01■□□□□ 0.79
RANBP3-225ENST00000592133 DNMT1P26358 1616 aaKnown RBP19.99■□□□□ 0.79
RANBP3-225ENST00000592133 ATP7AQ04656 1500 aa19.99■□□□□ 0.79
RANBP3-225ENST00000592133 ANKLE2Q86XL3 938 aa19.99■□□□□ 0.79
RANBP3-225ENST00000592133 CCDC18Q5T9S5 1454 aa19.99■□□□□ 0.79
RANBP3-225ENST00000592133 CDC42BPAQ5VT25 1732 aa19.98■□□□□ 0.79
RANBP3-225ENST00000592133 PLXNC1O60486 1568 aa19.96■□□□□ 0.79
RANBP3-225ENST00000592133 FBXO31Q5XUX0 539 aaPredicted RBP19.95■□□□□ 0.78
RANBP3-225ENST00000592133 CFDP1Q9UEE9 299 aaPredicted RBP19.95■□□□□ 0.78
RANBP3-225ENST00000592133 TNRQ92752 1358 aa19.94■□□□□ 0.78
RANBP3-225ENST00000592133 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
RANBP3-225ENST00000592133 GPATCH8Q9UKJ3 1502 aaKnown RBP19.93■□□□□ 0.78
RANBP3-225ENST00000592133 NEURL4Q96JN8 1562 aa19.93■□□□□ 0.78
RANBP3-225ENST00000592133 THEMISQ8N1K5 641 aaPredicted RBP19.93■□□□□ 0.78
RANBP3-225ENST00000592133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.93■□□□□ 0.78
RANBP3-225ENST00000592133 KIAA1107Q9UPP5 1409 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms