RNA–Protein interactions for RNA: ENST00000590104.1

LAMA3-211, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-211ENST00000590104 PYGBP11216 843 aa11.96□□□□□ -0.49
LAMA3-211ENST00000590104 KLHL34Q8N239 644 aa11.96□□□□□ -0.49
LAMA3-211ENST00000590104 WIZO95785 1651 aa11.95□□□□□ -0.5
LAMA3-211ENST00000590104 VASPP50552 380 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-211ENST00000590104 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
LAMA3-211ENST00000590104 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
LAMA3-211ENST00000590104 CHMP7Q8WUX9 453 aaPredicted RBP11.92□□□□□ -0.5
LAMA3-211ENST00000590104 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
LAMA3-211ENST00000590104 FAM163AQ96GL9 167 aaPredicted RBP11.91□□□□□ -0.5
LAMA3-211ENST00000590104 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
LAMA3-211ENST00000590104 SYNJ2O15056 1496 aa11.9□□□□□ -0.5
LAMA3-211ENST00000590104 KDM6BO15054 1643 aa11.9□□□□□ -0.5
LAMA3-211ENST00000590104 ADGRL1O94910 1474 aa11.89□□□□□ -0.51
LAMA3-211ENST00000590104 PLCG2P16885 1265 aa11.88□□□□□ -0.51
LAMA3-211ENST00000590104 FAM69CQ0P6D2 419 aa11.88□□□□□ -0.51
LAMA3-211ENST00000590104 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
LAMA3-211ENST00000590104 PCDHB8Q9UN66 801 aa11.87□□□□□ -0.51
LAMA3-211ENST00000590104 GSE1Q14687 1217 aa11.86□□□□□ -0.51
LAMA3-211ENST00000590104 SNAPC4Q5SXM2 1469 aa11.86□□□□□ -0.51
LAMA3-211ENST00000590104 PRDM2Q13029 1718 aa11.84□□□□□ -0.51
LAMA3-211ENST00000590104 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
LAMA3-211ENST00000590104 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
LAMA3-211ENST00000590104 TDRD9Q8NDG6 1382 aaKnown RBP11.82□□□□□ -0.52
LAMA3-211ENST00000590104 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
LAMA3-211ENST00000590104 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
LAMA3-211ENST00000590104 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
LAMA3-211ENST00000590104 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
LAMA3-211ENST00000590104 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
LAMA3-211ENST00000590104 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
LAMA3-211ENST00000590104 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
LAMA3-211ENST00000590104 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
LAMA3-211ENST00000590104 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
LAMA3-211ENST00000590104 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
LAMA3-211ENST00000590104 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
LAMA3-211ENST00000590104 POLA1P09884 1462 aaPredicted RBP11.73□□□□□ -0.53
LAMA3-211ENST00000590104 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
LAMA3-211ENST00000590104 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
LAMA3-211ENST00000590104 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
LAMA3-211ENST00000590104 DIP2BQ9P265 1576 aa11.71□□□□□ -0.53
LAMA3-211ENST00000590104 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
LAMA3-211ENST00000590104 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
LAMA3-211ENST00000590104 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
LAMA3-211ENST00000590104 PSEN1P49768 467 aa11.69□□□□□ -0.54
LAMA3-211ENST00000590104 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
LAMA3-211ENST00000590104 SOGA1O94964 1423 aa11.68□□□□□ -0.54
LAMA3-211ENST00000590104 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
LAMA3-211ENST00000590104 SPATA31D1Q6ZQQ2 1576 aa11.66□□□□□ -0.54
LAMA3-211ENST00000590104 GRIN2BQ13224 1484 aa11.65□□□□□ -0.54
LAMA3-211ENST00000590104 ST18O60284 1047 aa11.64□□□□□ -0.55
LAMA3-211ENST00000590104 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
LAMA3-211ENST00000590104 PDAP1Q13442 181 aaKnown RBP11.63□□□□□ -0.55
LAMA3-211ENST00000590104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.62□□□□□ -0.55
LAMA3-211ENST00000590104 MAPKBP1O60336 1514 aa11.61□□□□□ -0.55
LAMA3-211ENST00000590104 L3MBTL3Q96JM7 780 aaPredicted RBP11.61□□□□□ -0.55
LAMA3-211ENST00000590104 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
LAMA3-211ENST00000590104 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
LAMA3-211ENST00000590104 SNPHO15079 494 aa11.59□□□□□ -0.55
LAMA3-211ENST00000590104 CDAN1Q8IWY9 1227 aa11.59□□□□□ -0.55
LAMA3-211ENST00000590104 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
LAMA3-211ENST00000590104 CERKQ8TCT0 537 aa11.57□□□□□ -0.56
LAMA3-211ENST00000590104 CABP2Q9NPB3 220 aa11.56□□□□□ -0.56
LAMA3-211ENST00000590104 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
LAMA3-211ENST00000590104 SHROOM2Q13796 1616 aa11.55□□□□□ -0.56
LAMA3-211ENST00000590104 TMEM121BQ9BXQ6 578 aaPredicted RBP11.54□□□□□ -0.56
LAMA3-211ENST00000590104 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
LAMA3-211ENST00000590104 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
LAMA3-211ENST00000590104 COL17A1Q9UMD9 1497 aaPredicted RBP11.52□□□□□ -0.56
LAMA3-211ENST00000590104 PRG4Q92954 1404 aaPredicted RBP11.52□□□□□ -0.57
LAMA3-211ENST00000590104 GRIN2AQ12879 1464 aa11.51□□□□□ -0.57
LAMA3-211ENST00000590104 ADCY10Q96PN6 1610 aa11.51□□□□□ -0.57
LAMA3-211ENST00000590104 PPRC1Q5VV67 1664 aaKnown RBP11.51□□□□□ -0.57
LAMA3-211ENST00000590104 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
LAMA3-211ENST00000590104 G3V3G9 751 aa11.48□□□□□ -0.57
LAMA3-211ENST00000590104 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
LAMA3-211ENST00000590104 NUP160Q12769 1436 aa11.48□□□□□ -0.57
LAMA3-211ENST00000590104 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
LAMA3-211ENST00000590104 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
LAMA3-211ENST00000590104 CUX1P39880 1505 aa11.42□□□□□ -0.58
LAMA3-211ENST00000590104 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
LAMA3-211ENST00000590104 PCF11O94913 1555 aaKnown RBP11.41□□□□□ -0.58
LAMA3-211ENST00000590104 HSPA2P54652 639 aa11.4□□□□□ -0.58
LAMA3-211ENST00000590104 EMP3P54852 163 aa11.4□□□□□ -0.58
LAMA3-211ENST00000590104 EFCAB3Q8N7B9 438 aa11.4□□□□□ -0.58
LAMA3-211ENST00000590104 PTPRMP28827 1452 aa11.39□□□□□ -0.59
LAMA3-211ENST00000590104 ABCA10Q8WWZ4 1543 aa11.39□□□□□ -0.59
LAMA3-211ENST00000590104 KIF21BO75037 1637 aa11.38□□□□□ -0.59
LAMA3-211ENST00000590104 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
LAMA3-211ENST00000590104 ADAMTS12P58397 1594 aa11.37□□□□□ -0.59
LAMA3-211ENST00000590104 RIOK3O14730 519 aaKnown RBP11.35□□□□□ -0.59
LAMA3-211ENST00000590104 GLI2P10070 1586 aa11.35□□□□□ -0.59
LAMA3-211ENST00000590104 ASXL2Q76L83 1435 aa11.34□□□□□ -0.59
LAMA3-211ENST00000590104 TTBK1Q5TCY1 1321 aaPredicted RBP11.34□□□□□ -0.59
LAMA3-211ENST00000590104 FAM205CA6NFA0 338 aa11.32□□□□□ -0.6
LAMA3-211ENST00000590104 RNF25Q96BH1 459 aaPredicted RBP11.32□□□□□ -0.6
LAMA3-211ENST00000590104 TEX14Q8IWB6 1497 aa11.32□□□□□ -0.6
LAMA3-211ENST00000590104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
LAMA3-211ENST00000590104 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
LAMA3-211ENST00000590104 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
LAMA3-211ENST00000590104 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
LAMA3-211ENST00000590104 HS3ST6Q96QI5 342 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms