RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 KDM5CP41229 1560 aa19.23■□□□□ 0.67
KDM4B-208ENST00000589104 ABCC5O15440 1437 aa19.21■□□□□ 0.67
KDM4B-208ENST00000589104 ABCA8O94911 1581 aa19.2■□□□□ 0.66
KDM4B-208ENST00000589104 ANKRD30BQ9BXX2 1392 aa19.2■□□□□ 0.66
KDM4B-208ENST00000589104 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
KDM4B-208ENST00000589104 SHANK2Q9UPX8 1470 aa19.18■□□□□ 0.66
KDM4B-208ENST00000589104 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
KDM4B-208ENST00000589104 CNTLNQ9NXG0 1405 aa19.15■□□□□ 0.66
KDM4B-208ENST00000589104 LAMC1P11047 1609 aa19.14■□□□□ 0.66
KDM4B-208ENST00000589104 ABCC10Q5T3U5 1492 aa19.13■□□□□ 0.65
KDM4B-208ENST00000589104 ARHGEF5Q12774 1597 aa19.13■□□□□ 0.65
KDM4B-208ENST00000589104 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
KDM4B-208ENST00000589104 UHRF1BP1Q6BDS2 1440 aa19.12■□□□□ 0.65
KDM4B-208ENST00000589104 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
KDM4B-208ENST00000589104 NUP160Q12769 1436 aa19.11■□□□□ 0.65
KDM4B-208ENST00000589104 ANP32EQ9BTT0 268 aa19.1■□□□□ 0.65
KDM4B-208ENST00000589104 PTPRGP23470 1445 aa19.1■□□□□ 0.65
KDM4B-208ENST00000589104 ARHGEF12Q9NZN5 1544 aa19.1■□□□□ 0.65
KDM4B-208ENST00000589104 WASHC2AQ641Q2 1341 aa19.09■□□□□ 0.65
KDM4B-208ENST00000589104 CAMSAP2Q08AD1 1489 aa19.09■□□□□ 0.65
KDM4B-208ENST00000589104 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.65
KDM4B-208ENST00000589104 MAST1Q9Y2H9 1570 aa19.08■□□□□ 0.65
KDM4B-208ENST00000589104 GPATCH8Q9UKJ3 1502 aaKnown RBP19.07■□□□□ 0.64
KDM4B-208ENST00000589104 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
KDM4B-208ENST00000589104 SHROOM2Q13796 1616 aa19.05■□□□□ 0.64
KDM4B-208ENST00000589104 UNC13BO14795 1591 aa19.05■□□□□ 0.64
KDM4B-208ENST00000589104 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
KDM4B-208ENST00000589104 CDC42BPBQ9Y5S2 1711 aa19.04■□□□□ 0.64
KDM4B-208ENST00000589104 PREX2Q70Z35 1606 aa19.03■□□□□ 0.64
KDM4B-208ENST00000589104 DDX10Q13206 875 aaKnown RBP19.03■□□□□ 0.64
KDM4B-208ENST00000589104 TROQ12816 1431 aaPredicted RBP19.03■□□□□ 0.64
KDM4B-208ENST00000589104 ITGAEP38570 1179 aa19.02■□□□□ 0.64
KDM4B-208ENST00000589104 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.63
KDM4B-208ENST00000589104 DHX29Q7Z478 1369 aaKnown RBP19.01■□□□□ 0.63
KDM4B-208ENST00000589104 TRPM1Q7Z4N2 1603 aa19.01■□□□□ 0.63
KDM4B-208ENST00000589104 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
KDM4B-208ENST00000589104 CCDC7Q96M83 1385 aa18.99■□□□□ 0.63
KDM4B-208ENST00000589104 RALGAPBQ86X10 1494 aa18.99■□□□□ 0.63
KDM4B-208ENST00000589104 RNF17Q9BXT8 1623 aaKnown RBP18.97■□□□□ 0.63
KDM4B-208ENST00000589104 MAGI2Q86UL8 1455 aa18.96■□□□□ 0.63
KDM4B-208ENST00000589104 PLXNC1O60486 1568 aa18.95■□□□□ 0.62
KDM4B-208ENST00000589104 MYO5CQ9NQX4 1742 aa18.95■□□□□ 0.62
KDM4B-208ENST00000589104 SAMD9LQ8IVG5 1584 aa18.92■□□□□ 0.62
KDM4B-208ENST00000589104 C11orf95C9JLR9 678 aaPredicted RBP18.92■□□□□ 0.62
KDM4B-208ENST00000589104 RNF123Q5XPI4 1314 aa18.92■□□□□ 0.62
KDM4B-208ENST00000589104 ZMYM4Q5VZL5 1548 aa18.92■□□□□ 0.62
KDM4B-208ENST00000589104 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
KDM4B-208ENST00000589104 MPHOSPH9Q99550 1183 aa18.92■□□□□ 0.62
KDM4B-208ENST00000589104 KIAA1107Q9UPP5 1409 aa18.92■□□□□ 0.62
KDM4B-208ENST00000589104 IQGAP3Q86VI3 1631 aa18.91■□□□□ 0.62
KDM4B-208ENST00000589104 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
KDM4B-208ENST00000589104 NBPF8Q3BBV2 869 aa18.87■□□□□ 0.61
KDM4B-208ENST00000589104 PLB1Q6P1J6 1458 aa18.86■□□□□ 0.61
KDM4B-208ENST00000589104 ANP32CO43423 234 aa18.86■□□□□ 0.61
KDM4B-208ENST00000589104 PRG4Q92954 1404 aaPredicted RBP18.85■□□□□ 0.61
KDM4B-208ENST00000589104 ARID4BQ4LE39 1312 aaPredicted RBP18.85■□□□□ 0.61
KDM4B-208ENST00000589104 ATP10AO60312 1499 aa18.84■□□□□ 0.61
KDM4B-208ENST00000589104 PRDM15P57071 1507 aaPredicted RBP18.83■□□□□ 0.6
KDM4B-208ENST00000589104 L3MBTL2Q969R5 705 aa18.82■□□□□ 0.6
KDM4B-208ENST00000589104 NEURL4Q96JN8 1562 aa18.82■□□□□ 0.6
KDM4B-208ENST00000589104 ATP10BO94823 1461 aa18.81■□□□□ 0.6
KDM4B-208ENST00000589104 SMG6Q86US8 1419 aaKnown RBP18.8■□□□□ 0.6
KDM4B-208ENST00000589104 ZBED9Q6R2W3 1325 aa18.8■□□□□ 0.6
KDM4B-208ENST00000589104 PRKRIP1Q9H875 184 aaPredicted RBP18.8■□□□□ 0.6
KDM4B-208ENST00000589104 DEPDC5O75140 1603 aa18.8■□□□□ 0.6
KDM4B-208ENST00000589104 LRPPRCP42704 1394 aaKnown RBP18.79■□□□□ 0.6
KDM4B-208ENST00000589104 KIF7Q2M1P5 1343 aa18.78■□□□□ 0.6
KDM4B-208ENST00000589104 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
KDM4B-208ENST00000589104 IQGAP1P46940 1657 aa18.78■□□□□ 0.6
KDM4B-208ENST00000589104 FKBP8Q14318 412 aa18.78■□□□□ 0.6
KDM4B-208ENST00000589104 INSRP06213 1382 aa18.78■□□□□ 0.6
KDM4B-208ENST00000589104 CCDC184Q52MB2 194 aa18.77■□□□□ 0.6
KDM4B-208ENST00000589104 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
KDM4B-208ENST00000589104 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
KDM4B-208ENST00000589104 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
KDM4B-208ENST00000589104 GPRASP1Q5JY77 1395 aa18.74■□□□□ 0.59
KDM4B-208ENST00000589104 RBM19Q9Y4C8 960 aaKnown RBP18.74■□□□□ 0.59
KDM4B-208ENST00000589104 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.59
KDM4B-208ENST00000589104 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
KDM4B-208ENST00000589104 CHD1O14646 1710 aa18.73■□□□□ 0.59
KDM4B-208ENST00000589104 ZNF644Q9H582 1327 aaPredicted RBP18.72■□□□□ 0.59
KDM4B-208ENST00000589104 PLA2R1Q13018 1463 aa18.72■□□□□ 0.59
KDM4B-208ENST00000589104 CEP152O94986 1710 aa18.71■□□□□ 0.59
KDM4B-208ENST00000589104 EIF2AK4Q9P2K8 1649 aaKnown RBP18.71■□□□□ 0.59
KDM4B-208ENST00000589104 MSH5O43196 834 aa18.7■□□□□ 0.58
KDM4B-208ENST00000589104 SPHKAPQ2M3C7 1700 aa18.7■□□□□ 0.58
KDM4B-208ENST00000589104 MYOM1P52179 1685 aa18.7■□□□□ 0.58
KDM4B-208ENST00000589104 C9orf84Q5VXU9 1444 aa18.7■□□□□ 0.58
KDM4B-208ENST00000589104 KIAA1210Q9ULL0 1709 aa18.69■□□□□ 0.58
KDM4B-208ENST00000589104 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
KDM4B-208ENST00000589104 ANKRD50Q9ULJ7 1429 aa18.68■□□□□ 0.58
KDM4B-208ENST00000589104 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
KDM4B-208ENST00000589104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■■■□□ 17.8
KDM4B-208ENST00000589104 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
KDM4B-208ENST00000589104 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
KDM4B-208ENST00000589104 MADDQ8WXG6 1647 aa18.66■□□□□ 0.58
KDM4B-208ENST00000589104 BCANQ96GW7 911 aa18.65■□□□□ 0.58
KDM4B-208ENST00000589104 ARAP3Q8WWN8 1544 aa18.65■□□□□ 0.58
KDM4B-208ENST00000589104 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
KDM4B-208ENST00000589104 CCDC141Q6ZP82 1450 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms