RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 GRIN2BQ13224 1484 aa9.36□□□□□ -0.91
MSI2-219ENST00000584476 MAMSTRQ6ZN01 415 aa9.36□□□□□ -0.91
MSI2-219ENST00000584476 FAM212AQ96EL1 285 aa9.36□□□□□ -0.91
MSI2-219ENST00000584476 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
MSI2-219ENST00000584476 CUL7Q14999 1698 aa9.36□□□□□ -0.91
MSI2-219ENST00000584476 CEP162Q5TB80 1403 aa9.35□□□□□ -0.91
MSI2-219ENST00000584476 PBRM1Q86U86 1689 aa9.35□□□□□ -0.91
MSI2-219ENST00000584476 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
MSI2-219ENST00000584476 PCDHB13Q9Y5F0 798 aa9.34□□□□□ -0.91
MSI2-219ENST00000584476 TTLL13PA6NNM8 815 aa9.33□□□□□ -0.92
MSI2-219ENST00000584476 SNAPC4Q5SXM2 1469 aa9.32□□□□□ -0.92
MSI2-219ENST00000584476 ADAMTS12P58397 1594 aa9.32□□□□□ -0.92
MSI2-219ENST00000584476 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
MSI2-219ENST00000584476 RANGAP1P46060 587 aaPredicted RBP9.31□□□□□ -0.92
MSI2-219ENST00000584476 CLIP1P30622 1438 aa9.31□□□□□ -0.92
MSI2-219ENST00000584476 POTEFA5A3E0 1075 aa9.3□□□□□ -0.92
MSI2-219ENST00000584476 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
MSI2-219ENST00000584476 IER5LQ5T953 404 aa9.28□□□□□ -0.92
MSI2-219ENST00000584476 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
MSI2-219ENST00000584476 SCUBE2Q9NQ36 999 aa9.27□□□□□ -0.93
MSI2-219ENST00000584476 SEC24BO95487 1268 aa9.26□□□□□ -0.93
MSI2-219ENST00000584476 DCAF8Q5TAQ9 597 aa9.26□□□□□ -0.93
MSI2-219ENST00000584476 TRIM35Q9UPQ4 493 aa9.26□□□□□ -0.93
MSI2-219ENST00000584476 SYNJ2O15056 1496 aa9.26□□□□□ -0.93
MSI2-219ENST00000584476 GRIN2AQ12879 1464 aa9.25□□□□□ -0.93
MSI2-219ENST00000584476 ARHGAP35Q9NRY4 1499 aa9.24□□□□□ -0.93
MSI2-219ENST00000584476 CHMP7Q8WUX9 453 aaPredicted RBP9.24□□□□□ -0.93
MSI2-219ENST00000584476 COLQQ9Y215 455 aaPredicted RBP9.24□□□□□ -0.93
MSI2-219ENST00000584476 ARAP1Q96P48 1450 aa9.23□□□□□ -0.93
MSI2-219ENST00000584476 VASPP50552 380 aaPredicted RBP9.23□□□□□ -0.93
MSI2-219ENST00000584476 CTTNBP2Q8WZ74 1663 aa9.23□□□□□ -0.93
MSI2-219ENST00000584476 TMEM106CQ9BVX2 250 aa9.22□□□□□ -0.93
MSI2-219ENST00000584476 CEP170Q5SW79 1584 aa9.2□□□□□ -0.94
MSI2-219ENST00000584476 POTEMA6NI47 508 aa9.2□□□□□ -0.94
MSI2-219ENST00000584476 P3H3Q8IVL6 736 aa9.2□□□□□ -0.94
MSI2-219ENST00000584476 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
MSI2-219ENST00000584476 VPS8Q8N3P4 1428 aa9.2□□□□□ -0.94
MSI2-219ENST00000584476 PYGBP11216 843 aa9.19□□□□□ -0.94
MSI2-219ENST00000584476 NUP160Q12769 1436 aa9.19□□□□□ -0.94
MSI2-219ENST00000584476 KIAA0586Q9BVV6 1533 aa9.19□□□□□ -0.94
MSI2-219ENST00000584476 IQGAP2Q13576 1575 aa9.19□□□□□ -0.94
MSI2-219ENST00000584476 GSE1Q14687 1217 aa9.18□□□□□ -0.94
MSI2-219ENST00000584476 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
MSI2-219ENST00000584476 EFCAB5A4FU69 1503 aa9.17□□□□□ -0.94
MSI2-219ENST00000584476 FHOD3Q2V2M9 1422 aa9.17□□□□□ -0.94
MSI2-219ENST00000584476 PPARGC1BQ86YN6 1023 aaKnown RBP9.17□□□□□ -0.94
MSI2-219ENST00000584476 CHD1O14646 1710 aa9.17□□□□□ -0.94
MSI2-219ENST00000584476 SAMD9Q5K651 1589 aa9.16□□□□□ -0.94
MSI2-219ENST00000584476 UGGT2Q9NYU1 1516 aa9.15□□□□□ -0.94
MSI2-219ENST00000584476 CHRM1P11229 460 aaPredicted RBP9.14□□□□□ -0.95
MSI2-219ENST00000584476 PLCG2P16885 1265 aa9.14□□□□□ -0.95
MSI2-219ENST00000584476 IRX5P78411 483 aaPredicted RBP9.14□□□□□ -0.95
MSI2-219ENST00000584476 PCDH10Q9P2E7 1040 aa9.14□□□□□ -0.95
MSI2-219ENST00000584476 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
MSI2-219ENST00000584476 DISP1Q96F81 1524 aa9.12□□□□□ -0.95
MSI2-219ENST00000584476 LCE2DQ5TA82 110 aaPredicted RBP9.12□□□□□ -0.95
MSI2-219ENST00000584476 ZNF467Q7Z7K2 595 aaPredicted RBP9.12□□□□□ -0.95
MSI2-219ENST00000584476 FAM163AQ96GL9 167 aaPredicted RBP9.12□□□□□ -0.95
MSI2-219ENST00000584476 JPH4Q96JJ6 628 aa9.12□□□□□ -0.95
MSI2-219ENST00000584476 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
MSI2-219ENST00000584476 TTBK1Q5TCY1 1321 aaPredicted RBP9.1□□□□□ -0.95
MSI2-219ENST00000584476 KIAA0556O60303 1618 aa9.1□□□□□ -0.95
MSI2-219ENST00000584476 OCEL1Q9H607 264 aa9.1□□□□□ -0.95
MSI2-219ENST00000584476 PCF11O94913 1555 aaKnown RBP9.1□□□□□ -0.95
MSI2-219ENST00000584476 FMN1Q68DA7 1419 aa9.09□□□□□ -0.95
MSI2-219ENST00000584476 CASKIN1Q8WXD9 1431 aa9.08□□□□□ -0.96
MSI2-219ENST00000584476 PRG4Q92954 1404 aaPredicted RBP9.08□□□□□ -0.96
MSI2-219ENST00000584476 ATP1B4Q9UN42 357 aaPredicted RBP9.08□□□□□ -0.96
MSI2-219ENST00000584476 CLASP1Q7Z460 1538 aa9.08□□□□□ -0.96
MSI2-219ENST00000584476 KANK4Q5T7N3 995 aaPredicted RBP9.07□□□□□ -0.96
MSI2-219ENST00000584476 CARMIL2Q6F5E8 1435 aa9.06□□□□□ -0.96
MSI2-219ENST00000584476 SHROOM2Q13796 1616 aa9.06□□□□□ -0.96
MSI2-219ENST00000584476 IFNLR1Q8IU57 520 aaPredicted RBP9.06□□□□□ -0.96
MSI2-219ENST00000584476 SLAIN1Q8ND83 568 aa9.06□□□□□ -0.96
MSI2-219ENST00000584476 SPOCK2Q92563 424 aa9.06□□□□□ -0.96
MSI2-219ENST00000584476 FYCO1Q9BQS8 1478 aa9.06□□□□□ -0.96
MSI2-219ENST00000584476 TRIM26Q12899 539 aaPredicted RBP9.05□□□□□ -0.96
MSI2-219ENST00000584476 PCGF6Q9BYE7 350 aa9.05□□□□□ -0.96
MSI2-219ENST00000584476 ERCC6L2Q5T890 1561 aa9.04□□□□□ -0.96
MSI2-219ENST00000584476 TIAM1Q13009 1591 aa9.03□□□□□ -0.96
MSI2-219ENST00000584476 MAP3K1Q13233 1512 aa9.03□□□□□ -0.96
MSI2-219ENST00000584476 GOLGA2Q08379 1002 aa9.02□□□□□ -0.97
MSI2-219ENST00000584476 PLB1Q6P1J6 1458 aa9.02□□□□□ -0.97
MSI2-219ENST00000584476 CFAP43Q8NDM7 1665 aa9.01□□□□□ -0.97
MSI2-219ENST00000584476 ARID3CA6NKF2 412 aa9.01□□□□□ -0.97
MSI2-219ENST00000584476 PTPRGP23470 1445 aa9.01□□□□□ -0.97
MSI2-219ENST00000584476 PSEN1P49768 467 aa9.01□□□□□ -0.97
MSI2-219ENST00000584476 MKRN3Q13064 507 aaKnown RBP9.01□□□□□ -0.97
MSI2-219ENST00000584476 HECW1Q76N89 1606 aa9.01□□□□□ -0.97
MSI2-219ENST00000584476 LRRC9Q6ZRR7 1453 aa9.01□□□□□ -0.97
MSI2-219ENST00000584476 LRRIQ1Q96JM4 1722 aa9□□□□□ -0.97
MSI2-219ENST00000584476 RAPGEF6Q8TEU7 1601 aa9□□□□□ -0.97
MSI2-219ENST00000584476 NUP153P49790 1475 aaKnown RBP9□□□□□ -0.97
MSI2-219ENST00000584476 EPRSP07814 1512 aaKnown RBP9□□□□□ -0.97
MSI2-219ENST00000584476 PDAP1Q13442 181 aaKnown RBP8.99□□□□□ -0.97
MSI2-219ENST00000584476 PDCD7Q8N8D1 485 aaKnown RBP8.99□□□□□ -0.97
MSI2-219ENST00000584476 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.99□□□□□ -0.97
MSI2-219ENST00000584476 CIZ1Q9ULV3 898 aaPredicted RBP8.99□□□□□ -0.97
MSI2-219ENST00000584476 CDK13Q14004 1512 aaKnown RBP8.99□□□□□ -0.97
MSI2-219ENST00000584476 ABCA8O94911 1581 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms