RNA–Protein interactions for RNA: ENST00000579020.5

GDPD1-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 5

Gene GDPD1, Length 834 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-203ENST00000579020 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
GDPD1-203ENST00000579020 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
GDPD1-203ENST00000579020 SPATA31D1Q6ZQQ2 1576 aa15.57■□□□□ 0.08
GDPD1-203ENST00000579020 NEO1Q92859 1461 aa15.55■□□□□ 0.08
GDPD1-203ENST00000579020 ABCA9Q8IUA7 1624 aa15.54■□□□□ 0.08
GDPD1-203ENST00000579020 APLP2Q06481 763 aa15.54■□□□□ 0.08
GDPD1-203ENST00000579020 POGZQ7Z3K3 1410 aa15.53■□□□□ 0.08
GDPD1-203ENST00000579020 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
GDPD1-203ENST00000579020 CTTNBP2Q8WZ74 1663 aa15.5■□□□□ 0.07
GDPD1-203ENST00000579020 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
GDPD1-203ENST00000579020 ARHGEF40Q8TER5 1519 aa15.48■□□□□ 0.07
GDPD1-203ENST00000579020 FANCAO15360 1455 aa15.47■□□□□ 0.07
GDPD1-203ENST00000579020 ATP10BO94823 1461 aa15.46■□□□□ 0.06
GDPD1-203ENST00000579020 YEATS2Q9ULM3 1422 aa15.45■□□□□ 0.06
GDPD1-203ENST00000579020 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
GDPD1-203ENST00000579020 DENND4BO75064 1496 aaPredicted RBP15.43■□□□□ 0.06
GDPD1-203ENST00000579020 PREX1Q8TCU6 1659 aa15.43■□□□□ 0.06
GDPD1-203ENST00000579020 FER1L4A9Z1Z3 1794 aa15.42■□□□□ 0.06
GDPD1-203ENST00000579020 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
GDPD1-203ENST00000579020 RICTORQ6R327 1708 aa15.42■□□□□ 0.06
GDPD1-203ENST00000579020 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
GDPD1-203ENST00000579020 STRCQ7RTU9 1775 aa15.4■□□□□ 0.06
GDPD1-203ENST00000579020 FHOD3Q2V2M9 1422 aa15.39■□□□□ 0.05
GDPD1-203ENST00000579020 MLECQ14165 292 aa15.38■□□□□ 0.05
GDPD1-203ENST00000579020 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
GDPD1-203ENST00000579020 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
GDPD1-203ENST00000579020 EFCAB5A4FU69 1503 aa15.38■□□□□ 0.05
GDPD1-203ENST00000579020 MAGI2Q86UL8 1455 aa15.37■□□□□ 0.05
GDPD1-203ENST00000579020 CFAP74Q9C0B2 1584 aa15.36■□□□□ 0.05
GDPD1-203ENST00000579020 IQSEC2Q5JU85 1478 aa15.36■□□□□ 0.05
GDPD1-203ENST00000579020 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
GDPD1-203ENST00000579020 ZFYVE16Q7Z3T8 1539 aa15.36■□□□□ 0.05
GDPD1-203ENST00000579020 ZMYM4Q5VZL5 1548 aa15.35■□□□□ 0.05
GDPD1-203ENST00000579020 SIGLEC1Q9BZZ2 1709 aa15.34■□□□□ 0.05
GDPD1-203ENST00000579020 PTPRTO14522 1441 aa15.34■□□□□ 0.05
GDPD1-203ENST00000579020 UHRF1BP1Q6BDS2 1440 aa15.32■□□□□ 0.04
GDPD1-203ENST00000579020 RAPGEF6Q8TEU7 1601 aa15.31■□□□□ 0.04
GDPD1-203ENST00000579020 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
GDPD1-203ENST00000579020 RNF39Q9H2S5 420 aa15.3■□□□□ 0.04
GDPD1-203ENST00000579020 ARHGEF12Q9NZN5 1544 aa15.3■□□□□ 0.04
GDPD1-203ENST00000579020 PLEKHD1A6NEE1 506 aa15.29■□□□□ 0.04
GDPD1-203ENST00000579020 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
GDPD1-203ENST00000579020 SPINK5Q9NQ38 1064 aaPredicted RBP15.28■□□□□ 0.04
GDPD1-203ENST00000579020 LTBP4Q8N2S1 1624 aa15.28■□□□□ 0.04
GDPD1-203ENST00000579020 HECW1Q76N89 1606 aa15.27■□□□□ 0.03
GDPD1-203ENST00000579020 ATP10AO60312 1499 aa15.27■□□□□ 0.03
GDPD1-203ENST00000579020 C9orf84Q5VXU9 1444 aa15.24■□□□□ 0.03
GDPD1-203ENST00000579020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.03
GDPD1-203ENST00000579020 NUP153P49790 1475 aaKnown RBP15.21■□□□□ 0.03
GDPD1-203ENST00000579020 PRXQ9BXM0 1461 aa15.21■□□□□ 0.03
GDPD1-203ENST00000579020 SCAPERQ9BY12 1400 aa15.21■□□□□ 0.03
GDPD1-203ENST00000579020 UBAP1LF5GYI3 381 aa15.21■□□□□ 0.03
GDPD1-203ENST00000579020 SAMD9Q5K651 1589 aa15.2■□□□□ 0.02
GDPD1-203ENST00000579020 CAPN15O75808 1086 aa15.19■□□□□ 0.02
GDPD1-203ENST00000579020 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
GDPD1-203ENST00000579020 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
GDPD1-203ENST00000579020 NCOA1Q15788 1441 aa15.16■□□□□ 0.02
GDPD1-203ENST00000579020 TRAPPC8Q9Y2L5 1435 aa15.16■□□□□ 0.02
GDPD1-203ENST00000579020 C3P01024 1663 aa15.16■□□□□ 0.02
GDPD1-203ENST00000579020 PLCH2O75038 1416 aa15.15■□□□□ 0.02
GDPD1-203ENST00000579020 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
GDPD1-203ENST00000579020 POLA2Q14181 598 aa15.14■□□□□ 0.01
GDPD1-203ENST00000579020 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
GDPD1-203ENST00000579020 EFCAB2Q5VUJ9 269 aa15.13■□□□□ 0.01
GDPD1-203ENST00000579020 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
GDPD1-203ENST00000579020 ZNF518AQ6AHZ1 1483 aa15.1■□□□□ 0.01
GDPD1-203ENST00000579020 MYT1LQ9UL68 1186 aa15.1■□□□□ 0.01
GDPD1-203ENST00000579020 REREQ9P2R6 1566 aa15.09■□□□□ 0.01
GDPD1-203ENST00000579020 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
GDPD1-203ENST00000579020 CAMSAP1Q5T5Y3 1602 aa15.09■□□□□ 0.01
GDPD1-203ENST00000579020 MYO5CQ9NQX4 1742 aa15.07■□□□□ 0
GDPD1-203ENST00000579020 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
GDPD1-203ENST00000579020 HSPA1LP34931 641 aa15.06■□□□□ 0
GDPD1-203ENST00000579020 PKD2Q13563 968 aa15.06■□□□□ 0
GDPD1-203ENST00000579020 AGLP35573 1532 aa15.06■□□□□ 0
GDPD1-203ENST00000579020 AFAP1Q8N556 730 aa15.05■□□□□ -0
GDPD1-203ENST00000579020 KDM5CP41229 1560 aa15.05■□□□□ -0
GDPD1-203ENST00000579020 NPATQ14207 1427 aa15.04■□□□□ -0
GDPD1-203ENST00000579020 NCKAP5LQ9HCH0 1330 aa15.04■□□□□ -0
GDPD1-203ENST00000579020 TOM1O60784 492 aa15.04■□□□□ -0
GDPD1-203ENST00000579020 DIP2CQ9Y2E4 1556 aa15.03■□□□□ -0
GDPD1-203ENST00000579020 RANGAP1P46060 587 aaPredicted RBP15.02■□□□□ -0
GDPD1-203ENST00000579020 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
GDPD1-203ENST00000579020 MLH3Q9UHC1 1453 aa15.01□□□□□ -0.01
GDPD1-203ENST00000579020 SUPT6HQ7KZ85 1726 aaKnown RBP15□□□□□ -0.01
GDPD1-203ENST00000579020 PLA2R1Q13018 1463 aa15□□□□□ -0.01
GDPD1-203ENST00000579020 MROH2AA6NES4 1674 aa15□□□□□ -0.01
GDPD1-203ENST00000579020 CDK11AQ9UQ88 783 aaPredicted RBP14.99□□□□□ -0.01
GDPD1-203ENST00000579020 ABCA6Q8N139 1617 aa14.98□□□□□ -0.01
GDPD1-203ENST00000579020 ARHGAP5Q13017 1502 aa14.97□□□□□ -0.01
GDPD1-203ENST00000579020 CDK13Q14004 1512 aaKnown RBP14.97□□□□□ -0.01
GDPD1-203ENST00000579020 ABCB7O75027 752 aa14.97□□□□□ -0.01
GDPD1-203ENST00000579020 FBXO3Q9UK99 471 aa14.97□□□□□ -0.01
GDPD1-203ENST00000579020 ZMYM3Q14202 1370 aa14.97□□□□□ -0.01
GDPD1-203ENST00000579020 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
GDPD1-203ENST00000579020 ZNF142P52746 1687 aaPredicted RBP14.95□□□□□ -0.02
GDPD1-203ENST00000579020 PROM2Q8N271 834 aa14.94□□□□□ -0.02
GDPD1-203ENST00000579020 CPS1P31327 1500 aa14.93□□□□□ -0.02
GDPD1-203ENST00000579020 KIF14Q15058 1648 aa14.92□□□□□ -0.02
GDPD1-203ENST00000579020 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms