RNA–Protein interactions for RNA: ENST00000577185.1

TTC39C-204, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3 BASIC

Gene TTC39C, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-204ENST00000577185 SNPHO15079 494 aa12.38□□□□□ -0.43
TTC39C-204ENST00000577185 MAGI1Q96QZ7 1491 aaPredicted RBP12.38□□□□□ -0.43
TTC39C-204ENST00000577185 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
TTC39C-204ENST00000577185 PLCG2P16885 1265 aa12.35□□□□□ -0.43
TTC39C-204ENST00000577185 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
TTC39C-204ENST00000577185 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
TTC39C-204ENST00000577185 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
TTC39C-204ENST00000577185 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
TTC39C-204ENST00000577185 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
TTC39C-204ENST00000577185 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
TTC39C-204ENST00000577185 PCDHB13Q9Y5F0 798 aa12.3□□□□□ -0.44
TTC39C-204ENST00000577185 ABCA10Q8WWZ4 1543 aa12.28□□□□□ -0.44
TTC39C-204ENST00000577185 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
TTC39C-204ENST00000577185 KRTAP3-3Q9BYR6 98 aa12.28□□□□□ -0.44
TTC39C-204ENST00000577185 KRTAP3-2Q9BYR7 98 aa12.28□□□□□ -0.44
TTC39C-204ENST00000577185 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.45
TTC39C-204ENST00000577185 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
TTC39C-204ENST00000577185 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
TTC39C-204ENST00000577185 PBRM1Q86U86 1689 aa12.23□□□□□ -0.45
TTC39C-204ENST00000577185 ABCA5Q8WWZ7 1642 aa12.23□□□□□ -0.45
TTC39C-204ENST00000577185 EMP3P54852 163 aa12.23□□□□□ -0.45
TTC39C-204ENST00000577185 GRIN2AQ12879 1464 aa12.21□□□□□ -0.46
TTC39C-204ENST00000577185 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
TTC39C-204ENST00000577185 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
TTC39C-204ENST00000577185 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
TTC39C-204ENST00000577185 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
TTC39C-204ENST00000577185 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
TTC39C-204ENST00000577185 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
TTC39C-204ENST00000577185 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
TTC39C-204ENST00000577185 PROM2Q8N271 834 aa12.17□□□□□ -0.46
TTC39C-204ENST00000577185 NUP160Q12769 1436 aa12.17□□□□□ -0.46
TTC39C-204ENST00000577185 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
TTC39C-204ENST00000577185 ADAMTS12P58397 1594 aa12.15□□□□□ -0.46
TTC39C-204ENST00000577185 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
TTC39C-204ENST00000577185 BIVM-ERCC5R4GMW8 1640 aa12.14□□□□□ -0.47
TTC39C-204ENST00000577185 CEP170Q5SW79 1584 aa12.13□□□□□ -0.47
TTC39C-204ENST00000577185 ERCC6L2Q5T890 1561 aa12.13□□□□□ -0.47
TTC39C-204ENST00000577185 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
TTC39C-204ENST00000577185 MIER1Q8N108 512 aa12.13□□□□□ -0.47
TTC39C-204ENST00000577185 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
TTC39C-204ENST00000577185 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
TTC39C-204ENST00000577185 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
TTC39C-204ENST00000577185 PRG4Q92954 1404 aaPredicted RBP12.09□□□□□ -0.47
TTC39C-204ENST00000577185 NUBP1P53384 320 aa12.01□□□□□ -0.49
TTC39C-204ENST00000577185 C3orf67Q6ZVT6 689 aa12.01□□□□□ -0.49
TTC39C-204ENST00000577185 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
TTC39C-204ENST00000577185 FAM69CQ0P6D2 419 aa11.99□□□□□ -0.49
TTC39C-204ENST00000577185 IGF1RP08069 1367 aa11.98□□□□□ -0.49
TTC39C-204ENST00000577185 RUSC2Q8N2Y8 1516 aa11.97□□□□□ -0.49
TTC39C-204ENST00000577185 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
TTC39C-204ENST00000577185 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
TTC39C-204ENST00000577185 ABCC10Q5T3U5 1492 aa11.96□□□□□ -0.49
TTC39C-204ENST00000577185 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
TTC39C-204ENST00000577185 MAPKBP1O60336 1514 aa11.93□□□□□ -0.5
TTC39C-204ENST00000577185 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
TTC39C-204ENST00000577185 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
TTC39C-204ENST00000577185 PLCD3Q8N3E9 789 aa11.92□□□□□ -0.5
TTC39C-204ENST00000577185 KIF13AQ9H1H9 1805 aa11.92□□□□□ -0.5
TTC39C-204ENST00000577185 CARMIL1Q5VZK9 1371 aa11.91□□□□□ -0.5
TTC39C-204ENST00000577185 CUL7Q14999 1698 aa11.91□□□□□ -0.5
TTC39C-204ENST00000577185 PTPRGP23470 1445 aa11.9□□□□□ -0.5
TTC39C-204ENST00000577185 ZBTB47Q9UFB7 747 aaPredicted RBP11.9□□□□□ -0.5
TTC39C-204ENST00000577185 ADCY10Q96PN6 1610 aa11.89□□□□□ -0.51
TTC39C-204ENST00000577185 DIP2BQ9P265 1576 aa11.88□□□□□ -0.51
TTC39C-204ENST00000577185 CARMIL2Q6F5E8 1435 aa11.87□□□□□ -0.51
TTC39C-204ENST00000577185 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
TTC39C-204ENST00000577185 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
TTC39C-204ENST00000577185 TTBK1Q5TCY1 1321 aaPredicted RBP11.86□□□□□ -0.51
TTC39C-204ENST00000577185 PCDHB8Q9UN66 801 aa11.82□□□□□ -0.52
TTC39C-204ENST00000577185 KDM6BO15054 1643 aa11.82□□□□□ -0.52
TTC39C-204ENST00000577185 ABCC2Q92887 1545 aa11.81□□□□□ -0.52
TTC39C-204ENST00000577185 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
TTC39C-204ENST00000577185 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
TTC39C-204ENST00000577185 PLB1Q6P1J6 1458 aa11.81□□□□□ -0.52
TTC39C-204ENST00000577185 ERBB3P21860 1342 aa11.81□□□□□ -0.52
TTC39C-204ENST00000577185 IQGAP2Q13576 1575 aa11.8□□□□□ -0.52
TTC39C-204ENST00000577185 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
TTC39C-204ENST00000577185 UACAQ9BZF9 1416 aa11.79□□□□□ -0.52
TTC39C-204ENST00000577185 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
TTC39C-204ENST00000577185 PYGBP11216 843 aa11.79□□□□□ -0.52
TTC39C-204ENST00000577185 UHRF1BP1LA0JNW5 1464 aa11.78□□□□□ -0.52
TTC39C-204ENST00000577185 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
TTC39C-204ENST00000577185 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
TTC39C-204ENST00000577185 DISP1Q96F81 1524 aa11.76□□□□□ -0.53
TTC39C-204ENST00000577185 GLI2P10070 1586 aa11.75□□□□□ -0.53
TTC39C-204ENST00000577185 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
TTC39C-204ENST00000577185 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
TTC39C-204ENST00000577185 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
TTC39C-204ENST00000577185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.53
TTC39C-204ENST00000577185 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
TTC39C-204ENST00000577185 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
TTC39C-204ENST00000577185 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.53
TTC39C-204ENST00000577185 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.53
TTC39C-204ENST00000577185 PTGER2P43116 358 aa11.7□□□□□ -0.54
TTC39C-204ENST00000577185 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
TTC39C-204ENST00000577185 TEX14Q8IWB6 1497 aa11.7□□□□□ -0.54
TTC39C-204ENST00000577185 KIAA0556O60303 1618 aa11.68□□□□□ -0.54
TTC39C-204ENST00000577185 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
TTC39C-204ENST00000577185 GOLGA3Q08378 1498 aa11.67□□□□□ -0.54
TTC39C-204ENST00000577185 COL17A1Q9UMD9 1497 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms