RNA–Protein interactions for RNA: ENST00000576924.5

SRRM2-230, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 3,314 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-230ENST00000576924 NUP155O75694 1391 aa22.76■■□□□ 1.23
SRRM2-230ENST00000576924 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
SRRM2-230ENST00000576924 ST20-MTHFSA0A0A6YYL1 179 aa22.74■■□□□ 1.23
SRRM2-230ENST00000576924 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
SRRM2-230ENST00000576924 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
SRRM2-230ENST00000576924 PRDM2Q13029 1718 aa22.72■■□□□ 1.23
SRRM2-230ENST00000576924 EFCAB5A4FU69 1503 aa22.71■■□□□ 1.23
SRRM2-230ENST00000576924 CCDC7Q96M83 1385 aa22.71■■□□□ 1.23
SRRM2-230ENST00000576924 PPP4R2Q9NY27 417 aa22.71■■□□□ 1.23
SRRM2-230ENST00000576924 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.23
SRRM2-230ENST00000576924 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
SRRM2-230ENST00000576924 PTPN23Q9H3S7 1636 aa22.67■■□□□ 1.22
SRRM2-230ENST00000576924 EPRSP07814 1512 aaKnown RBP22.66■■□□□ 1.22
SRRM2-230ENST00000576924 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
SRRM2-230ENST00000576924 MAGI3Q5TCQ9 1506 aa22.61■■□□□ 1.21
SRRM2-230ENST00000576924 USP47Q96K76 1375 aa22.61■■□□□ 1.21
SRRM2-230ENST00000576924 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
SRRM2-230ENST00000576924 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
SRRM2-230ENST00000576924 MSH5O43196 834 aa22.59■■□□□ 1.21
SRRM2-230ENST00000576924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.59■■□□□ 1.215e-15■■■□□ 16.5
SRRM2-230ENST00000576924 CNTLNQ9NXG0 1405 aa22.58■■□□□ 1.21
SRRM2-230ENST00000576924 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
SRRM2-230ENST00000576924 CFAP43Q8NDM7 1665 aa22.57■■□□□ 1.2
SRRM2-230ENST00000576924 EHBP1L1Q8N3D4 1523 aa22.56■■□□□ 1.2
SRRM2-230ENST00000576924 PLB1Q6P1J6 1458 aa22.56■■□□□ 1.2
SRRM2-230ENST00000576924 NBPF1Q3BBV0 1214 aa22.56■■□□□ 1.2
SRRM2-230ENST00000576924 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
SRRM2-230ENST00000576924 PLIN1O60240 522 aa22.55■■□□□ 1.2
SRRM2-230ENST00000576924 KDM6BO15054 1643 aa22.54■■□□□ 1.2
SRRM2-230ENST00000576924 DAPK1P53355 1430 aa22.54■■□□□ 1.2
SRRM2-230ENST00000576924 ABCC5O15440 1437 aa22.53■■□□□ 1.2
SRRM2-230ENST00000576924 CUL7Q14999 1698 aa22.53■■□□□ 1.2
SRRM2-230ENST00000576924 ANKRD30BQ9BXX2 1392 aa22.53■■□□□ 1.2
SRRM2-230ENST00000576924 ANKRD30AQ9BXX3 1397 aa22.53■■□□□ 1.2
SRRM2-230ENST00000576924 ROCK2O75116 1388 aaKnown RBP22.5■■□□□ 1.19
SRRM2-230ENST00000576924 ZBED9Q6R2W3 1325 aa22.48■■□□□ 1.19
SRRM2-230ENST00000576924 SKAP1Q86WV1 359 aa22.48■■□□□ 1.19
SRRM2-230ENST00000576924 TNNT2P45379 298 aaPredicted RBP22.48■■□□□ 1.19
SRRM2-230ENST00000576924 CTTNBP2Q8WZ74 1663 aa22.48■■□□□ 1.19
SRRM2-230ENST00000576924 IQGAP2Q13576 1575 aa22.47■■□□□ 1.19
SRRM2-230ENST00000576924 ANP32AP39687 249 aaKnown RBP22.47■■□□□ 1.19
SRRM2-230ENST00000576924 CDCA7LQ96GN5 454 aa22.46■■□□□ 1.19
SRRM2-230ENST00000576924 NUDCQ9Y266 331 aa22.46■■□□□ 1.19
SRRM2-230ENST00000576924 UGGT2Q9NYU1 1516 aa22.45■■□□□ 1.19
SRRM2-230ENST00000576924 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
SRRM2-230ENST00000576924 BCL11AQ9H165 835 aa22.44■■□□□ 1.18
SRRM2-230ENST00000576924 ANKRD50Q9ULJ7 1429 aa22.44■■□□□ 1.18
SRRM2-230ENST00000576924 EXOC6Q8TAG9 804 aa22.43■■□□□ 1.18
SRRM2-230ENST00000576924 NEUROD2Q15784 382 aa22.41■■□□□ 1.18
SRRM2-230ENST00000576924 CARMIL2Q6F5E8 1435 aa22.41■■□□□ 1.18
SRRM2-230ENST00000576924 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
SRRM2-230ENST00000576924 LAS1LQ9Y4W2 734 aaKnown RBP22.4■■□□□ 1.18
SRRM2-230ENST00000576924 HECW1Q76N89 1606 aa22.39■■□□□ 1.18
SRRM2-230ENST00000576924 MIA2Q96PC5 1412 aa22.39■■□□□ 1.17
SRRM2-230ENST00000576924 RTL5Q5HYW3 569 aaPredicted RBP22.39■■□□□ 1.17
SRRM2-230ENST00000576924 PANK3Q9H999 370 aa22.39■■□□□ 1.17
SRRM2-230ENST00000576924 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
SRRM2-230ENST00000576924 MRC2Q9UBG0 1479 aa22.37■■□□□ 1.17
SRRM2-230ENST00000576924 ZBTB47Q9UFB7 747 aaPredicted RBP22.37■■□□□ 1.17
SRRM2-230ENST00000576924 NCOA1Q15788 1441 aa22.36■■□□□ 1.17
SRRM2-230ENST00000576924 CCDC146Q8IYE0 955 aa22.35■■□□□ 1.17
SRRM2-230ENST00000576924 PAK3O75914 559 aaPredicted RBP22.35■■□□□ 1.17
SRRM2-230ENST00000576924 WDR43Q15061 677 aaKnown RBP eCLIP22.35■■□□□ 1.172e-27■□□□□ 10.1
SRRM2-230ENST00000576924 PNISRQ8TF01 805 aaKnown RBP22.34■■□□□ 1.17
SRRM2-230ENST00000576924 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
SRRM2-230ENST00000576924 NUP153P49790 1475 aaKnown RBP22.34■■□□□ 1.17
SRRM2-230ENST00000576924 DENND4BO75064 1496 aaPredicted RBP22.34■■□□□ 1.17
SRRM2-230ENST00000576924 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
SRRM2-230ENST00000576924 NUTM2DQ5VT03 806 aaPredicted RBP22.33■■□□□ 1.17
SRRM2-230ENST00000576924 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.16
SRRM2-230ENST00000576924 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
SRRM2-230ENST00000576924 PTPRGP23470 1445 aa22.31■■□□□ 1.16
SRRM2-230ENST00000576924 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
SRRM2-230ENST00000576924 KNSTRNQ9Y448 316 aa22.31■■□□□ 1.16
SRRM2-230ENST00000576924 DAXXQ9UER7 740 aaPredicted RBP22.31■■□□□ 1.16
SRRM2-230ENST00000576924 CAMSAP2Q08AD1 1489 aa22.3■■□□□ 1.16
SRRM2-230ENST00000576924 KIAA1107Q9UPP5 1409 aa22.3■■□□□ 1.16
SRRM2-230ENST00000576924 KIAA0586Q9BVV6 1533 aa22.29■■□□□ 1.16
SRRM2-230ENST00000576924 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
SRRM2-230ENST00000576924 RGS3P49796 1198 aa22.28■■□□□ 1.16
SRRM2-230ENST00000576924 SAMD9Q5K651 1589 aa22.28■■□□□ 1.16
SRRM2-230ENST00000576924 AFAP1Q8N556 730 aa22.28■■□□□ 1.16
SRRM2-230ENST00000576924 SAFB2Q14151 953 aaKnown RBP eCLIP22.27■■□□□ 1.16
SRRM2-230ENST00000576924 CANXP27824 592 aaKnown RBP22.26■■□□□ 1.15
SRRM2-230ENST00000576924 LRRIQ1Q96JM4 1722 aa22.26■■□□□ 1.15
SRRM2-230ENST00000576924 KTN1Q86UP2 1357 aaKnown RBP22.26■■□□□ 1.15
SRRM2-230ENST00000576924 MYBBP1AQ9BQG0 1328 aaKnown RBP22.25■■□□□ 1.15
SRRM2-230ENST00000576924 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
SRRM2-230ENST00000576924 TMF1P82094 1093 aa22.25■■□□□ 1.15
SRRM2-230ENST00000576924 GRIN2AQ12879 1464 aa22.25■■□□□ 1.15
SRRM2-230ENST00000576924 CCDC144AA2RUR9 1427 aa22.24■■□□□ 1.15
SRRM2-230ENST00000576924 NLRP13Q86W25 1043 aa22.24■■□□□ 1.15
SRRM2-230ENST00000576924 GPATCH8Q9UKJ3 1502 aaKnown RBP22.23■■□□□ 1.15
SRRM2-230ENST00000576924 SLC4A3P48751 1232 aa22.22■■□□□ 1.15
SRRM2-230ENST00000576924 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
SRRM2-230ENST00000576924 WDR62O43379 1518 aa22.21■■□□□ 1.15
SRRM2-230ENST00000576924 ROCK1Q13464 1354 aa22.21■■□□□ 1.15
SRRM2-230ENST00000576924 DISP1Q96F81 1524 aa22.21■■□□□ 1.15
SRRM2-230ENST00000576924 DEKP35659 375 aaKnown RBP22.21■■□□□ 1.15
SRRM2-230ENST00000576924 KIF3BO15066 747 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms