RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 KIF7Q2M1P5 1343 aa19.57■□□□□ 0.72
SCARF1-209ENST00000576012 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
SCARF1-209ENST00000576012 NUDCQ9Y266 331 aa19.56■□□□□ 0.72
SCARF1-209ENST00000576012 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
SCARF1-209ENST00000576012 SLC4A3P48751 1232 aa19.54■□□□□ 0.72
SCARF1-209ENST00000576012 EXOC6Q8TAG9 804 aa19.54■□□□□ 0.72
SCARF1-209ENST00000576012 TMC1Q8TDI8 760 aa19.54■□□□□ 0.72
SCARF1-209ENST00000576012 NAIPQ13075 1403 aa19.53■□□□□ 0.72
SCARF1-209ENST00000576012 BRPF3Q9ULD4 1205 aa19.5■□□□□ 0.71
SCARF1-209ENST00000576012 HFM1A2PYH4 1435 aa19.49■□□□□ 0.71
SCARF1-209ENST00000576012 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
SCARF1-209ENST00000576012 PLIN1O60240 522 aa19.46■□□□□ 0.71
SCARF1-209ENST00000576012 PDE4AP27815 886 aa19.46■□□□□ 0.71
SCARF1-209ENST00000576012 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
SCARF1-209ENST00000576012 MAP3K1Q13233 1512 aa19.45■□□□□ 0.7
SCARF1-209ENST00000576012 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
SCARF1-209ENST00000576012 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
SCARF1-209ENST00000576012 KDM5BQ9UGL1 1544 aa19.42■□□□□ 0.7
SCARF1-209ENST00000576012 PTPN23Q9H3S7 1636 aa19.41■□□□□ 0.7
SCARF1-209ENST00000576012 KDM2AQ9Y2K7 1162 aa19.4■□□□□ 0.7
SCARF1-209ENST00000576012 TARBP1Q13395 1621 aaKnown RBP19.39■□□□□ 0.7
SCARF1-209ENST00000576012 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
SCARF1-209ENST00000576012 SMG6Q86US8 1419 aaKnown RBP19.38■□□□□ 0.69
SCARF1-209ENST00000576012 CASKIN1Q8WXD9 1431 aa19.38■□□□□ 0.69
SCARF1-209ENST00000576012 WDR62O43379 1518 aa19.38■□□□□ 0.69
SCARF1-209ENST00000576012 ABCA5Q8WWZ7 1642 aa19.38■□□□□ 0.69
SCARF1-209ENST00000576012 NCOA2Q15596 1464 aa19.38■□□□□ 0.69
SCARF1-209ENST00000576012 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
SCARF1-209ENST00000576012 RRP1P56182 461 aaKnown RBP19.35■□□□□ 0.69
SCARF1-209ENST00000576012 CUL7Q14999 1698 aa19.35■□□□□ 0.69
SCARF1-209ENST00000576012 MYOM3Q5VTT5 1437 aa19.35■□□□□ 0.69
SCARF1-209ENST00000576012 PNISRQ8TF01 805 aaKnown RBP19.35■□□□□ 0.69
SCARF1-209ENST00000576012 RCAN3Q9UKA8 241 aa19.34■□□□□ 0.69
SCARF1-209ENST00000576012 FYCO1Q9BQS8 1478 aa19.34■□□□□ 0.69
SCARF1-209ENST00000576012 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.69
SCARF1-209ENST00000576012 ZNF644Q9H582 1327 aaPredicted RBP19.33■□□□□ 0.69
SCARF1-209ENST00000576012 FBLN2P98095 1184 aa19.33■□□□□ 0.68
SCARF1-209ENST00000576012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.33■□□□□ 0.686e-8■■■■□ 21.9
SCARF1-209ENST00000576012 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
SCARF1-209ENST00000576012 BACH2Q9BYV9 841 aa19.31■□□□□ 0.68
SCARF1-209ENST00000576012 DENND4BO75064 1496 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-209ENST00000576012 CFAP43Q8NDM7 1665 aa19.3■□□□□ 0.68
SCARF1-209ENST00000576012 ARXQ96QS3 562 aa19.3■□□□□ 0.68
SCARF1-209ENST00000576012 ZNF777Q9ULD5 760 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-209ENST00000576012 TCERG1O14776 1098 aaKnown RBP19.29■□□□□ 0.68
SCARF1-209ENST00000576012 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
SCARF1-209ENST00000576012 FRAT1Q92837 279 aaPredicted RBP19.27■□□□□ 0.67
SCARF1-209ENST00000576012 KDM6BO15054 1643 aa19.27■□□□□ 0.67
SCARF1-209ENST00000576012 PPM1GO15355 546 aaPredicted RBP19.26■□□□□ 0.67
SCARF1-209ENST00000576012 RNF123Q5XPI4 1314 aa19.26■□□□□ 0.67
SCARF1-209ENST00000576012 NFKBIBQ15653 356 aa19.26■□□□□ 0.67
SCARF1-209ENST00000576012 GSE1Q14687 1217 aa19.25■□□□□ 0.67
SCARF1-209ENST00000576012 USP47Q96K76 1375 aa19.24■□□□□ 0.67
SCARF1-209ENST00000576012 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
SCARF1-209ENST00000576012 CARD11Q9BXL7 1154 aa19.24■□□□□ 0.67
SCARF1-209ENST00000576012 GRIN2BQ13224 1484 aa19.24■□□□□ 0.67
SCARF1-209ENST00000576012 CRBNQ96SW2 442 aa19.24■□□□□ 0.67
SCARF1-209ENST00000576012 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
SCARF1-209ENST00000576012 RGS3P49796 1198 aa19.22■□□□□ 0.67
SCARF1-209ENST00000576012 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
SCARF1-209ENST00000576012 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
SCARF1-209ENST00000576012 C20orf194Q5TEA3 1177 aa19.2■□□□□ 0.66
SCARF1-209ENST00000576012 ANKRD30BQ9BXX2 1392 aa19.19■□□□□ 0.66
SCARF1-209ENST00000576012 UBE2Q2Q8WVN8 375 aa19.19■□□□□ 0.66
SCARF1-209ENST00000576012 PKD2Q13563 968 aa19.18■□□□□ 0.66
SCARF1-209ENST00000576012 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
SCARF1-209ENST00000576012 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
SCARF1-209ENST00000576012 CTTNBP2Q8WZ74 1663 aa19.18■□□□□ 0.66
SCARF1-209ENST00000576012 FRAT2O75474 233 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-209ENST00000576012 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
SCARF1-209ENST00000576012 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
SCARF1-209ENST00000576012 SPATA31E1Q6ZUB1 1445 aa19.14■□□□□ 0.66
SCARF1-209ENST00000576012 WASHC2CQ9Y4E1 1318 aa19.13■□□□□ 0.65
SCARF1-209ENST00000576012 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
SCARF1-209ENST00000576012 DCAF11Q8TEB1 546 aa19.12■□□□□ 0.65
SCARF1-209ENST00000576012 RGL3Q3MIN7 710 aa19.11■□□□□ 0.65
SCARF1-209ENST00000576012 DDRGK1Q96HY6 314 aa19.11■□□□□ 0.65
SCARF1-209ENST00000576012 RPRD2Q5VT52 1461 aaKnown RBP19.1■□□□□ 0.65
SCARF1-209ENST00000576012 MYBBP1AQ9BQG0 1328 aaKnown RBP19.09■□□□□ 0.65
SCARF1-209ENST00000576012 MAGI3Q5TCQ9 1506 aa19.09■□□□□ 0.65
SCARF1-209ENST00000576012 MS4A1P11836 297 aa19.08■□□□□ 0.65
SCARF1-209ENST00000576012 EFCAB5A4FU69 1503 aa19.07■□□□□ 0.64
SCARF1-209ENST00000576012 TEX14Q8IWB6 1497 aa19.06■□□□□ 0.64
SCARF1-209ENST00000576012 PODXL2Q9NZ53 605 aa19.06■□□□□ 0.64
SCARF1-209ENST00000576012 CDK13Q14004 1512 aaKnown RBP19.05■□□□□ 0.64
SCARF1-209ENST00000576012 KIF15Q9NS87 1388 aa19.05■□□□□ 0.64
SCARF1-209ENST00000576012 SLKQ9H2G2 1235 aaPredicted RBP19.04■□□□□ 0.64
SCARF1-209ENST00000576012 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
SCARF1-209ENST00000576012 GRIN2AQ12879 1464 aa19.02■□□□□ 0.64
SCARF1-209ENST00000576012 MAGI1Q96QZ7 1491 aaPredicted RBP19.02■□□□□ 0.63
SCARF1-209ENST00000576012 IQGAP2Q13576 1575 aa19.02■□□□□ 0.63
SCARF1-209ENST00000576012 NLRP13Q86W25 1043 aa19.01■□□□□ 0.63
SCARF1-209ENST00000576012 RALBP1Q15311 655 aa19.01■□□□□ 0.63
SCARF1-209ENST00000576012 CFDP1Q9UEE9 299 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-209ENST00000576012 SPRYD3Q8NCJ5 442 aa19■□□□□ 0.63
SCARF1-209ENST00000576012 UGGT2Q9NYU1 1516 aa19■□□□□ 0.63
SCARF1-209ENST00000576012 EHBP1L1Q8N3D4 1523 aa18.99■□□□□ 0.63
SCARF1-209ENST00000576012 SYNJ2O15056 1496 aa18.98■□□□□ 0.63
SCARF1-209ENST00000576012 BCORL1Q5H9F3 1711 aa18.98■□□□□ 0.63
SCARF1-209ENST00000576012 POGKQ9P215 609 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms