RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 TROQ12816 1431 aaPredicted RBP11.61□□□□□ -0.55
NCBP3-205ENST00000575815 CARD11Q9BXL7 1154 aa11.6□□□□□ -0.55
NCBP3-205ENST00000575815 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
NCBP3-205ENST00000575815 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
NCBP3-205ENST00000575815 RRBP1Q9P2E9 1410 aaKnown RBP11.58□□□□□ -0.56
NCBP3-205ENST00000575815 TARBP1Q13395 1621 aaKnown RBP11.58□□□□□ -0.56
NCBP3-205ENST00000575815 ADAMTS12P58397 1594 aa11.58□□□□□ -0.56
NCBP3-205ENST00000575815 NEFLP07196 543 aa11.57□□□□□ -0.56
NCBP3-205ENST00000575815 RAPGEF3O95398 923 aa11.56□□□□□ -0.56
NCBP3-205ENST00000575815 KANK1Q14678 1352 aa11.56□□□□□ -0.56
NCBP3-205ENST00000575815 ACIN1Q9UKV3 1341 aaKnown RBP11.56□□□□□ -0.56
NCBP3-205ENST00000575815 WASHC2CQ9Y4E1 1318 aa11.56□□□□□ -0.56
NCBP3-205ENST00000575815 ABCA5Q8WWZ7 1642 aa11.56□□□□□ -0.56
NCBP3-205ENST00000575815 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
NCBP3-205ENST00000575815 KIF15Q9NS87 1388 aa11.55□□□□□ -0.56
NCBP3-205ENST00000575815 ARHGEF11O15085 1522 aa11.55□□□□□ -0.56
NCBP3-205ENST00000575815 HECW1Q76N89 1606 aa11.54□□□□□ -0.56
NCBP3-205ENST00000575815 ARHGAP5Q13017 1502 aa11.53□□□□□ -0.56
NCBP3-205ENST00000575815 SENP3-EIF4A1A0A087X0R7 540 aa11.52□□□□□ -0.56
NCBP3-205ENST00000575815 EHBP1L1Q8N3D4 1523 aa11.52□□□□□ -0.57
NCBP3-205ENST00000575815 FAM9BQ8IZU0 186 aa11.51□□□□□ -0.57
NCBP3-205ENST00000575815 NUP160Q12769 1436 aa11.51□□□□□ -0.57
NCBP3-205ENST00000575815 ANKRD50Q9ULJ7 1429 aa11.51□□□□□ -0.57
NCBP3-205ENST00000575815 SAFB2Q14151 953 aaKnown RBP eCLIP11.5□□□□□ -0.57
NCBP3-205ENST00000575815 TIMELESSQ9UNS1 1208 aa11.5□□□□□ -0.57
NCBP3-205ENST00000575815 TMC1Q8TDI8 760 aa11.5□□□□□ -0.57
NCBP3-205ENST00000575815 ATP10BO94823 1461 aa11.5□□□□□ -0.57
NCBP3-205ENST00000575815 THOC2Q8NI27 1593 aaKnown RBP11.5□□□□□ -0.57
NCBP3-205ENST00000575815 HSPA5P11021 654 aaKnown RBP11.5□□□□□ -0.57
NCBP3-205ENST00000575815 NUP153P49790 1475 aaKnown RBP11.49□□□□□ -0.57
NCBP3-205ENST00000575815 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
NCBP3-205ENST00000575815 SALL2Q9Y467 1007 aaPredicted RBP11.49□□□□□ -0.57
NCBP3-205ENST00000575815 SCAPERQ9BY12 1400 aa11.49□□□□□ -0.57
NCBP3-205ENST00000575815 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
NCBP3-205ENST00000575815 DISP1Q96F81 1524 aa11.48□□□□□ -0.57
NCBP3-205ENST00000575815 MIA2Q96PC5 1412 aa11.48□□□□□ -0.57
NCBP3-205ENST00000575815 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
NCBP3-205ENST00000575815 STK26Q9P289 416 aa11.47□□□□□ -0.57
NCBP3-205ENST00000575815 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
NCBP3-205ENST00000575815 CTTNBP2Q8WZ74 1663 aa11.47□□□□□ -0.57
NCBP3-205ENST00000575815 SUPT6HQ7KZ85 1726 aaKnown RBP11.45□□□□□ -0.58
NCBP3-205ENST00000575815 C9orf84Q5VXU9 1444 aa11.45□□□□□ -0.58
NCBP3-205ENST00000575815 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
NCBP3-205ENST00000575815 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
NCBP3-205ENST00000575815 KIAA0556O60303 1618 aa11.44□□□□□ -0.58
NCBP3-205ENST00000575815 DAPK1P53355 1430 aa11.44□□□□□ -0.58
NCBP3-205ENST00000575815 HNRNPUQ00839 825 aaKnown RBP eCLIP11.44□□□□□ -0.58
NCBP3-205ENST00000575815 MAP3K1Q13233 1512 aa11.43□□□□□ -0.58
NCBP3-205ENST00000575815 NAIPQ13075 1403 aa11.43□□□□□ -0.58
NCBP3-205ENST00000575815 POGKQ9P215 609 aa11.43□□□□□ -0.58
NCBP3-205ENST00000575815 ABCC5O15440 1437 aa11.42□□□□□ -0.58
NCBP3-205ENST00000575815 CD109Q6YHK3 1445 aa11.42□□□□□ -0.58
NCBP3-205ENST00000575815 HFM1A2PYH4 1435 aa11.42□□□□□ -0.58
NCBP3-205ENST00000575815 CCDC144AA2RUR9 1427 aa11.42□□□□□ -0.58
NCBP3-205ENST00000575815 RAPGEF6Q8TEU7 1601 aa11.41□□□□□ -0.58
NCBP3-205ENST00000575815 PTPRKQ15262 1439 aa11.41□□□□□ -0.58
NCBP3-205ENST00000575815 C14orf37Q86TY3 774 aa11.41□□□□□ -0.58
NCBP3-205ENST00000575815 GPATCH8Q9UKJ3 1502 aaKnown RBP11.41□□□□□ -0.58
NCBP3-205ENST00000575815 GTF3C3Q9Y5Q9 886 aa11.4□□□□□ -0.58
NCBP3-205ENST00000575815 ROCK2O75116 1388 aaKnown RBP11.4□□□□□ -0.59
NCBP3-205ENST00000575815 CAMSAP2Q08AD1 1489 aa11.39□□□□□ -0.59
NCBP3-205ENST00000575815 ST20-MTHFSA0A0A6YYL1 179 aa11.38□□□□□ -0.59
NCBP3-205ENST00000575815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.38□□□□□ -0.59
NCBP3-205ENST00000575815 ASXL2Q76L83 1435 aa11.38□□□□□ -0.59
NCBP3-205ENST00000575815 TNNT2P45379 298 aaPredicted RBP11.38□□□□□ -0.59
NCBP3-205ENST00000575815 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
NCBP3-205ENST00000575815 CC2D1BQ5T0F9 858 aaKnown RBP11.37□□□□□ -0.59
NCBP3-205ENST00000575815 TRAK1Q9UPV9 953 aa11.37□□□□□ -0.59
NCBP3-205ENST00000575815 NCOA1Q15788 1441 aa11.36□□□□□ -0.59
NCBP3-205ENST00000575815 TMF1P82094 1093 aa11.35□□□□□ -0.59
NCBP3-205ENST00000575815 KNSTRNQ9Y448 316 aa11.35□□□□□ -0.59
NCBP3-205ENST00000575815 KIF14Q15058 1648 aa11.35□□□□□ -0.59
NCBP3-205ENST00000575815 SRPK2P78362 688 aaKnown RBP11.34□□□□□ -0.59
NCBP3-205ENST00000575815 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
NCBP3-205ENST00000575815 SAMD9Q5K651 1589 aa11.33□□□□□ -0.6
NCBP3-205ENST00000575815 ADGRL1O94910 1474 aa11.33□□□□□ -0.6
NCBP3-205ENST00000575815 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
NCBP3-205ENST00000575815 CCDC141Q6ZP82 1450 aa11.33□□□□□ -0.6
NCBP3-205ENST00000575815 FANCAO15360 1455 aa11.33□□□□□ -0.6
NCBP3-205ENST00000575815 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.6
NCBP3-205ENST00000575815 NBPF8Q3BBV2 869 aa11.33□□□□□ -0.6
NCBP3-205ENST00000575815 PLEKHH2Q8IVE3 1493 aa11.32□□□□□ -0.6
NCBP3-205ENST00000575815 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
NCBP3-205ENST00000575815 NUTM2FA1L443 756 aa11.32□□□□□ -0.6
NCBP3-205ENST00000575815 SCAF1Q9H7N4 1312 aaKnown RBP11.32□□□□□ -0.6
NCBP3-205ENST00000575815 HDGFP51858 240 aaKnown RBP11.31□□□□□ -0.6
NCBP3-205ENST00000575815 MAGI3Q5TCQ9 1506 aa11.31□□□□□ -0.6
NCBP3-205ENST00000575815 NBPF1Q3BBV0 1214 aa11.31□□□□□ -0.6
NCBP3-205ENST00000575815 AKNAQ7Z591 1439 aa11.31□□□□□ -0.6
NCBP3-205ENST00000575815 ERCC6L2Q5T890 1561 aa11.31□□□□□ -0.6
NCBP3-205ENST00000575815 ROCK1Q13464 1354 aa11.31□□□□□ -0.6
NCBP3-205ENST00000575815 TMEM132EQ6IEE7 984 aa11.3□□□□□ -0.6
NCBP3-205ENST00000575815 ZBTB7CA1YPR0 619 aa11.3□□□□□ -0.6
NCBP3-205ENST00000575815 PLCH2O75038 1416 aa11.3□□□□□ -0.6
NCBP3-205ENST00000575815 CHD1O14646 1710 aa11.29□□□□□ -0.6
NCBP3-205ENST00000575815 WDR43Q15061 677 aaKnown RBP eCLIP11.29□□□□□ -0.6
NCBP3-205ENST00000575815 SOX12O15370 315 aa11.29□□□□□ -0.6
NCBP3-205ENST00000575815 NEFMP07197 916 aa11.29□□□□□ -0.6
NCBP3-205ENST00000575815 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
NCBP3-205ENST00000575815 ABCC2Q92887 1545 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms