RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 CFTRP13569 1480 aa11.83□□□□□ -0.52
THUMPD1-205ENST00000570231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.82□□□□□ -0.52
THUMPD1-205ENST00000570231 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
THUMPD1-205ENST00000570231 RNF25Q96BH1 459 aaPredicted RBP11.82□□□□□ -0.52
THUMPD1-205ENST00000570231 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
THUMPD1-205ENST00000570231 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
THUMPD1-205ENST00000570231 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
THUMPD1-205ENST00000570231 BOLA1Q9Y3E2 137 aa11.8□□□□□ -0.52
THUMPD1-205ENST00000570231 SOX12O15370 315 aa11.79□□□□□ -0.52
THUMPD1-205ENST00000570231 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
THUMPD1-205ENST00000570231 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.53
THUMPD1-205ENST00000570231 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
THUMPD1-205ENST00000570231 ST18O60284 1047 aa11.75□□□□□ -0.53
THUMPD1-205ENST00000570231 FANCD2Q9BXW9 1451 aa11.74□□□□□ -0.53
THUMPD1-205ENST00000570231 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
THUMPD1-205ENST00000570231 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
THUMPD1-205ENST00000570231 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
THUMPD1-205ENST00000570231 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
THUMPD1-205ENST00000570231 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
THUMPD1-205ENST00000570231 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
THUMPD1-205ENST00000570231 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
THUMPD1-205ENST00000570231 STK25O00506 426 aa11.68□□□□□ -0.54
THUMPD1-205ENST00000570231 NLRP6P59044 892 aa11.68□□□□□ -0.54
THUMPD1-205ENST00000570231 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
THUMPD1-205ENST00000570231 PKD2Q13563 968 aa11.67□□□□□ -0.54
THUMPD1-205ENST00000570231 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
THUMPD1-205ENST00000570231 PRDM2Q13029 1718 aa11.65□□□□□ -0.54
THUMPD1-205ENST00000570231 KIF21AQ7Z4S6 1674 aa11.63□□□□□ -0.55
THUMPD1-205ENST00000570231 RGL2O15211 777 aa11.63□□□□□ -0.55
THUMPD1-205ENST00000570231 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
THUMPD1-205ENST00000570231 CUX1P39880 1505 aa11.62□□□□□ -0.55
THUMPD1-205ENST00000570231 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
THUMPD1-205ENST00000570231 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
THUMPD1-205ENST00000570231 MRC2Q9UBG0 1479 aa11.6□□□□□ -0.55
THUMPD1-205ENST00000570231 MS4A4AQ96JQ5 239 aa11.6□□□□□ -0.55
THUMPD1-205ENST00000570231 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
THUMPD1-205ENST00000570231 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
THUMPD1-205ENST00000570231 ZNF710Q8N1W2 664 aa11.59□□□□□ -0.55
THUMPD1-205ENST00000570231 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
THUMPD1-205ENST00000570231 TOPBP1Q92547 1522 aa11.57□□□□□ -0.56
THUMPD1-205ENST00000570231 EMP3P54852 163 aa11.57□□□□□ -0.56
THUMPD1-205ENST00000570231 DNMBPQ6XZF7 1577 aa11.57□□□□□ -0.56
THUMPD1-205ENST00000570231 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
THUMPD1-205ENST00000570231 TOP2BQ02880 1626 aa11.56□□□□□ -0.56
THUMPD1-205ENST00000570231 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
THUMPD1-205ENST00000570231 MFRPQ9BY79 579 aa11.54□□□□□ -0.56
THUMPD1-205ENST00000570231 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
THUMPD1-205ENST00000570231 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
THUMPD1-205ENST00000570231 THOC2Q8NI27 1593 aaKnown RBP11.53□□□□□ -0.56
THUMPD1-205ENST00000570231 WDR62O43379 1518 aa11.51□□□□□ -0.57
THUMPD1-205ENST00000570231 HOXB3P14651 431 aaPredicted RBP11.51□□□□□ -0.57
THUMPD1-205ENST00000570231 FAM9AQ8IZU1 332 aaPredicted RBP11.51□□□□□ -0.57
THUMPD1-205ENST00000570231 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
THUMPD1-205ENST00000570231 RAD54L2Q9Y4B4 1467 aa11.49□□□□□ -0.57
THUMPD1-205ENST00000570231 SOGA1O94964 1423 aa11.48□□□□□ -0.57
THUMPD1-205ENST00000570231 FAM205CA6NFA0 338 aa11.47□□□□□ -0.57
THUMPD1-205ENST00000570231 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
THUMPD1-205ENST00000570231 TMEM92Q6UXU6 159 aa11.47□□□□□ -0.57
THUMPD1-205ENST00000570231 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
THUMPD1-205ENST00000570231 CUX2O14529 1486 aa11.44□□□□□ -0.58
THUMPD1-205ENST00000570231 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
THUMPD1-205ENST00000570231 HS3ST6Q96QI5 342 aa11.44□□□□□ -0.58
THUMPD1-205ENST00000570231 RUSC2Q8N2Y8 1516 aa11.43□□□□□ -0.58
THUMPD1-205ENST00000570231 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
THUMPD1-205ENST00000570231 ERBB3P21860 1342 aa11.41□□□□□ -0.58
THUMPD1-205ENST00000570231 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
THUMPD1-205ENST00000570231 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
THUMPD1-205ENST00000570231 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.59
THUMPD1-205ENST00000570231 KIF27Q86VH2 1401 aa11.39□□□□□ -0.59
THUMPD1-205ENST00000570231 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
THUMPD1-205ENST00000570231 ZNF608Q9ULD9 1512 aaPredicted RBP11.38□□□□□ -0.59
THUMPD1-205ENST00000570231 TARBP1Q13395 1621 aaKnown RBP11.38□□□□□ -0.59
THUMPD1-205ENST00000570231 RYDENQ9NUL5 291 aaKnown RBP11.37□□□□□ -0.59
THUMPD1-205ENST00000570231 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
THUMPD1-205ENST00000570231 EEA1Q15075 1411 aa11.35□□□□□ -0.59
THUMPD1-205ENST00000570231 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
THUMPD1-205ENST00000570231 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
THUMPD1-205ENST00000570231 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
THUMPD1-205ENST00000570231 KIF3CO14782 793 aa11.33□□□□□ -0.6
THUMPD1-205ENST00000570231 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
THUMPD1-205ENST00000570231 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
THUMPD1-205ENST00000570231 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
THUMPD1-205ENST00000570231 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
THUMPD1-205ENST00000570231 PPP1R37O75864 691 aa11.31□□□□□ -0.6
THUMPD1-205ENST00000570231 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
THUMPD1-205ENST00000570231 EIF4G3O43432 1585 aaKnown RBP11.31□□□□□ -0.6
THUMPD1-205ENST00000570231 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
THUMPD1-205ENST00000570231 VARS2Q5ST30 1063 aaKnown RBP11.3□□□□□ -0.6
THUMPD1-205ENST00000570231 IGF1RP08069 1367 aa11.29□□□□□ -0.6
THUMPD1-205ENST00000570231 LOC105371045A0A1W2PR82 267 aa11.29□□□□□ -0.6
THUMPD1-205ENST00000570231 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
THUMPD1-205ENST00000570231 GRIN2BQ13224 1484 aa11.28□□□□□ -0.6
THUMPD1-205ENST00000570231 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.6
THUMPD1-205ENST00000570231 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.61
THUMPD1-205ENST00000570231 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.61
THUMPD1-205ENST00000570231 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
THUMPD1-205ENST00000570231 CARMIL1Q5VZK9 1371 aa11.26□□□□□ -0.61
THUMPD1-205ENST00000570231 SLC34A2O95436 690 aa11.25□□□□□ -0.61
THUMPD1-205ENST00000570231 ERICH3Q5RHP9 1530 aa11.25□□□□□ -0.61
THUMPD1-205ENST00000570231 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms