RNA–Protein interactions for RNA: ENST00000568841.5

SNAP23-220, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-220ENST00000568841 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
SNAP23-220ENST00000568841 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
SNAP23-220ENST00000568841 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
SNAP23-220ENST00000568841 SEC24BO95487 1268 aa13.78□□□□□ -0.2
SNAP23-220ENST00000568841 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
SNAP23-220ENST00000568841 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
SNAP23-220ENST00000568841 CHD1O14646 1710 aa13.75□□□□□ -0.21
SNAP23-220ENST00000568841 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
SNAP23-220ENST00000568841 CIZ1Q9ULV3 898 aaPredicted RBP13.74□□□□□ -0.21
SNAP23-220ENST00000568841 SCUBE2Q9NQ36 999 aa13.73□□□□□ -0.21
SNAP23-220ENST00000568841 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
SNAP23-220ENST00000568841 SNAPC4Q5SXM2 1469 aa13.7□□□□□ -0.22
SNAP23-220ENST00000568841 LCE2DQ5TA82 110 aaPredicted RBP13.7□□□□□ -0.22
SNAP23-220ENST00000568841 PLCG2P16885 1265 aa13.69□□□□□ -0.22
SNAP23-220ENST00000568841 PSEN1P49768 467 aa13.69□□□□□ -0.22
SNAP23-220ENST00000568841 ABCA10Q8WWZ4 1543 aa13.68□□□□□ -0.22
SNAP23-220ENST00000568841 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
SNAP23-220ENST00000568841 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
SNAP23-220ENST00000568841 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
SNAP23-220ENST00000568841 CLASP1Q7Z460 1538 aa13.67□□□□□ -0.22
SNAP23-220ENST00000568841 ARAP1Q96P48 1450 aa13.66□□□□□ -0.22
SNAP23-220ENST00000568841 PDAP1Q13442 181 aaKnown RBP13.65□□□□□ -0.22
SNAP23-220ENST00000568841 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
SNAP23-220ENST00000568841 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
SNAP23-220ENST00000568841 SYNJ2O15056 1496 aa13.63□□□□□ -0.23
SNAP23-220ENST00000568841 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
SNAP23-220ENST00000568841 ILDR1Q86SU0 546 aaPredicted RBP13.63□□□□□ -0.23
SNAP23-220ENST00000568841 CYB5RLQ6IPT4 315 aa13.61□□□□□ -0.23
SNAP23-220ENST00000568841 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
SNAP23-220ENST00000568841 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
SNAP23-220ENST00000568841 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
SNAP23-220ENST00000568841 SYNJ1O43426 1573 aa13.59□□□□□ -0.23
SNAP23-220ENST00000568841 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
SNAP23-220ENST00000568841 WRNQ14191 1432 aaPredicted RBP eCLIP13.58□□□□□ -0.24
SNAP23-220ENST00000568841 RNF25Q96BH1 459 aaPredicted RBP13.58□□□□□ -0.24
SNAP23-220ENST00000568841 POTEMA6NI47 508 aa13.56□□□□□ -0.24
SNAP23-220ENST00000568841 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
SNAP23-220ENST00000568841 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
SNAP23-220ENST00000568841 ADAMTS12P58397 1594 aa13.51□□□□□ -0.25
SNAP23-220ENST00000568841 GRIN2AQ12879 1464 aa13.51□□□□□ -0.25
SNAP23-220ENST00000568841 NUP160Q12769 1436 aa13.51□□□□□ -0.25
SNAP23-220ENST00000568841 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
SNAP23-220ENST00000568841 CABP2Q9NPB3 220 aa13.51□□□□□ -0.25
SNAP23-220ENST00000568841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.251e-8■□□□□ 8.9
SNAP23-220ENST00000568841 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
SNAP23-220ENST00000568841 FAM163AQ96GL9 167 aaPredicted RBP13.49□□□□□ -0.25
SNAP23-220ENST00000568841 CEP170Q5SW79 1584 aa13.48□□□□□ -0.25
SNAP23-220ENST00000568841 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
SNAP23-220ENST00000568841 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
SNAP23-220ENST00000568841 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
SNAP23-220ENST00000568841 DPY19L2Q6NUT2 758 aa13.46□□□□□ -0.25
SNAP23-220ENST00000568841 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
SNAP23-220ENST00000568841 RIOK3O14730 519 aaKnown RBP13.44□□□□□ -0.26
SNAP23-220ENST00000568841 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
SNAP23-220ENST00000568841 L3MBTL3Q96JM7 780 aaPredicted RBP13.41□□□□□ -0.26
SNAP23-220ENST00000568841 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
SNAP23-220ENST00000568841 IGF1RP08069 1367 aa13.38□□□□□ -0.27
SNAP23-220ENST00000568841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
SNAP23-220ENST00000568841 ST18O60284 1047 aa13.38□□□□□ -0.27
SNAP23-220ENST00000568841 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
SNAP23-220ENST00000568841 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
SNAP23-220ENST00000568841 PKD2Q13563 968 aa13.35□□□□□ -0.27
SNAP23-220ENST00000568841 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
SNAP23-220ENST00000568841 JPH4Q96JJ6 628 aa13.33□□□□□ -0.28
SNAP23-220ENST00000568841 TMEM121BQ9BXQ6 578 aaPredicted RBP13.32□□□□□ -0.28
SNAP23-220ENST00000568841 BOLA1Q9Y3E2 137 aa13.32□□□□□ -0.28
SNAP23-220ENST00000568841 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
SNAP23-220ENST00000568841 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
SNAP23-220ENST00000568841 MS4A4AQ96JQ5 239 aa13.3□□□□□ -0.28
SNAP23-220ENST00000568841 PCDH10Q9P2E7 1040 aa13.3□□□□□ -0.28
SNAP23-220ENST00000568841 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
SNAP23-220ENST00000568841 KIAA0586Q9BVV6 1533 aa13.27□□□□□ -0.29
SNAP23-220ENST00000568841 SOX12O15370 315 aa13.26□□□□□ -0.29
SNAP23-220ENST00000568841 CUL7Q14999 1698 aa13.25□□□□□ -0.29
SNAP23-220ENST00000568841 RGL2O15211 777 aa13.24□□□□□ -0.29
SNAP23-220ENST00000568841 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
SNAP23-220ENST00000568841 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
SNAP23-220ENST00000568841 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
SNAP23-220ENST00000568841 CARMIL1Q5VZK9 1371 aa13.23□□□□□ -0.29
SNAP23-220ENST00000568841 SNPHO15079 494 aa13.23□□□□□ -0.29
SNAP23-220ENST00000568841 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
SNAP23-220ENST00000568841 FBXO22Q8NEZ5 403 aa13.2□□□□□ -0.3
SNAP23-220ENST00000568841 KIF13AQ9H1H9 1805 aa13.19□□□□□ -0.3
SNAP23-220ENST00000568841 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
SNAP23-220ENST00000568841 ADCY10Q96PN6 1610 aa13.18□□□□□ -0.3
SNAP23-220ENST00000568841 TMEM92Q6UXU6 159 aa13.18□□□□□ -0.3
SNAP23-220ENST00000568841 HOXB3P14651 431 aaPredicted RBP13.17□□□□□ -0.3
SNAP23-220ENST00000568841 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
SNAP23-220ENST00000568841 MAPKBP1O60336 1514 aa13.16□□□□□ -0.3
SNAP23-220ENST00000568841 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
SNAP23-220ENST00000568841 STK24Q9Y6E0 443 aa13.15□□□□□ -0.3
SNAP23-220ENST00000568841 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
SNAP23-220ENST00000568841 G3V3G9 751 aa13.14□□□□□ -0.31
SNAP23-220ENST00000568841 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
SNAP23-220ENST00000568841 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
SNAP23-220ENST00000568841 STK25O00506 426 aa13.12□□□□□ -0.31
SNAP23-220ENST00000568841 DISP1Q96F81 1524 aa13.12□□□□□ -0.31
SNAP23-220ENST00000568841 NLRP6P59044 892 aa13.1□□□□□ -0.31
SNAP23-220ENST00000568841 PTPRGP23470 1445 aa13.1□□□□□ -0.31
SNAP23-220ENST00000568841 IQGAP2Q13576 1575 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms