RNA–Protein interactions for RNA: ENST00000568445.1

CENPN-208, Transcript of centromere protein N, humanhuman

TSL 5

Gene CENPN, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-208ENST00000568445 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
CENPN-208ENST00000568445 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
CENPN-208ENST00000568445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.73□□□□□ -0.37
CENPN-208ENST00000568445 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
CENPN-208ENST00000568445 SNPHO15079 494 aa12.7□□□□□ -0.38
CENPN-208ENST00000568445 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
CENPN-208ENST00000568445 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
CENPN-208ENST00000568445 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
CENPN-208ENST00000568445 URB2Q14146 1524 aaKnown RBP12.68□□□□□ -0.38
CENPN-208ENST00000568445 CYB5RLQ6IPT4 315 aa12.68□□□□□ -0.38
CENPN-208ENST00000568445 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
CENPN-208ENST00000568445 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
CENPN-208ENST00000568445 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
CENPN-208ENST00000568445 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
CENPN-208ENST00000568445 ARAP1Q96P48 1450 aa12.63□□□□□ -0.39
CENPN-208ENST00000568445 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
CENPN-208ENST00000568445 CFTRP13569 1480 aa12.62□□□□□ -0.39
CENPN-208ENST00000568445 ILDR1Q86SU0 546 aaPredicted RBP12.62□□□□□ -0.39
CENPN-208ENST00000568445 WIZO95785 1651 aa12.58□□□□□ -0.4
CENPN-208ENST00000568445 EMP3P54852 163 aa12.54□□□□□ -0.4
CENPN-208ENST00000568445 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
CENPN-208ENST00000568445 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
CENPN-208ENST00000568445 IFT140Q96RY7 1462 aa12.53□□□□□ -0.4
CENPN-208ENST00000568445 G3V3G9 751 aa12.52□□□□□ -0.41
CENPN-208ENST00000568445 MMRN1Q13201 1228 aa12.5□□□□□ -0.41
CENPN-208ENST00000568445 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
CENPN-208ENST00000568445 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
CENPN-208ENST00000568445 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
CENPN-208ENST00000568445 CHD1O14646 1710 aa12.48□□□□□ -0.41
CENPN-208ENST00000568445 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
CENPN-208ENST00000568445 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
CENPN-208ENST00000568445 FAM205CA6NFA0 338 aa12.48□□□□□ -0.41
CENPN-208ENST00000568445 HS3ST6Q96QI5 342 aa12.47□□□□□ -0.41
CENPN-208ENST00000568445 HOXB3P14651 431 aaPredicted RBP12.44□□□□□ -0.42
CENPN-208ENST00000568445 TOPBP1Q92547 1522 aa12.42□□□□□ -0.42
CENPN-208ENST00000568445 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.421e-9■■■■■ 38.8
CENPN-208ENST00000568445 KRTAP3-3Q9BYR6 98 aa12.41□□□□□ -0.42
CENPN-208ENST00000568445 KRTAP3-2Q9BYR7 98 aa12.41□□□□□ -0.42
CENPN-208ENST00000568445 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
CENPN-208ENST00000568445 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
CENPN-208ENST00000568445 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
CENPN-208ENST00000568445 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
CENPN-208ENST00000568445 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
CENPN-208ENST00000568445 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
CENPN-208ENST00000568445 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
CENPN-208ENST00000568445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.35□□□□□ -0.43
CENPN-208ENST00000568445 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
CENPN-208ENST00000568445 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
CENPN-208ENST00000568445 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
CENPN-208ENST00000568445 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
CENPN-208ENST00000568445 TMEM92Q6UXU6 159 aa12.32□□□□□ -0.44
CENPN-208ENST00000568445 DNMBPQ6XZF7 1577 aa12.31□□□□□ -0.44
CENPN-208ENST00000568445 MS4A4AQ96JQ5 239 aa12.31□□□□□ -0.44
CENPN-208ENST00000568445 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
CENPN-208ENST00000568445 SOX12O15370 315 aa12.3□□□□□ -0.44
CENPN-208ENST00000568445 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
CENPN-208ENST00000568445 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
CENPN-208ENST00000568445 ERBB3P21860 1342 aa12.28□□□□□ -0.44
CENPN-208ENST00000568445 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.45
CENPN-208ENST00000568445 SNAPC4Q5SXM2 1469 aa12.26□□□□□ -0.45
CENPN-208ENST00000568445 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
CENPN-208ENST00000568445 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
CENPN-208ENST00000568445 RAD54L2Q9Y4B4 1467 aa12.25□□□□□ -0.45
CENPN-208ENST00000568445 RIMBP2O15034 1052 aa12.24□□□□□ -0.45
CENPN-208ENST00000568445 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
CENPN-208ENST00000568445 GAPVD1Q14C86 1478 aa12.24□□□□□ -0.45
CENPN-208ENST00000568445 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
CENPN-208ENST00000568445 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
CENPN-208ENST00000568445 BCL11BQ9C0K0 894 aaPredicted RBP12.18□□□□□ -0.46
CENPN-208ENST00000568445 MAGI1Q96QZ7 1491 aaPredicted RBP12.18□□□□□ -0.46
CENPN-208ENST00000568445 SOGA1O94964 1423 aa12.17□□□□□ -0.46
CENPN-208ENST00000568445 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
CENPN-208ENST00000568445 NLRP6P59044 892 aa12.16□□□□□ -0.46
CENPN-208ENST00000568445 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
CENPN-208ENST00000568445 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
CENPN-208ENST00000568445 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
CENPN-208ENST00000568445 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
CENPN-208ENST00000568445 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
CENPN-208ENST00000568445 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
CENPN-208ENST00000568445 WDR97A6NE52 1622 aa12.15□□□□□ -0.47
CENPN-208ENST00000568445 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
CENPN-208ENST00000568445 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
CENPN-208ENST00000568445 ARSIQ5FYB1 569 aa12.12□□□□□ -0.47
CENPN-208ENST00000568445 FGD5Q6ZNL6 1462 aa12.1□□□□□ -0.47
CENPN-208ENST00000568445 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
CENPN-208ENST00000568445 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
CENPN-208ENST00000568445 TAOK2Q9UL54 1235 aa12.1□□□□□ -0.47
CENPN-208ENST00000568445 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
CENPN-208ENST00000568445 STK25O00506 426 aa12.08□□□□□ -0.48
CENPN-208ENST00000568445 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
CENPN-208ENST00000568445 RNF166Q96A37 237 aaPredicted RBP12.07□□□□□ -0.48
CENPN-208ENST00000568445 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
CENPN-208ENST00000568445 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
CENPN-208ENST00000568445 CUX1P39880 1505 aa12.03□□□□□ -0.48
CENPN-208ENST00000568445 C2orf72A6NCS6 295 aa12.02□□□□□ -0.49
CENPN-208ENST00000568445 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.49
CENPN-208ENST00000568445 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
CENPN-208ENST00000568445 KIF3CO14782 793 aa12□□□□□ -0.49
CENPN-208ENST00000568445 RGL2O15211 777 aa12□□□□□ -0.49
CENPN-208ENST00000568445 SHROOM2Q13796 1616 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms