RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 MAGI3Q5TCQ9 1506 aa12.19□□□□□ -0.46
HDGFL3-206ENST00000568294 KDM6BO15054 1643 aa12.19□□□□□ -0.46
HDGFL3-206ENST00000568294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDGFL3-206ENST00000568294 CNTLNQ9NXG0 1405 aa12.18□□□□□ -0.46
HDGFL3-206ENST00000568294 AKNAQ7Z591 1439 aa12.18□□□□□ -0.46
HDGFL3-206ENST00000568294 CARD11Q9BXL7 1154 aa12.16□□□□□ -0.46
HDGFL3-206ENST00000568294 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDGFL3-206ENST00000568294 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
HDGFL3-206ENST00000568294 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
HDGFL3-206ENST00000568294 DCAF11Q8TEB1 546 aa12.13□□□□□ -0.47
HDGFL3-206ENST00000568294 SUPT6HQ7KZ85 1726 aaKnown RBP12.13□□□□□ -0.47
HDGFL3-206ENST00000568294 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
HDGFL3-206ENST00000568294 EHBP1L1Q8N3D4 1523 aa12.13□□□□□ -0.47
HDGFL3-206ENST00000568294 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
HDGFL3-206ENST00000568294 PAK3O75914 559 aaPredicted RBP12.12□□□□□ -0.47
HDGFL3-206ENST00000568294 EPRSP07814 1512 aaKnown RBP12.12□□□□□ -0.47
HDGFL3-206ENST00000568294 DENND4BO75064 1496 aaPredicted RBP12.12□□□□□ -0.47
HDGFL3-206ENST00000568294 ZBED9Q6R2W3 1325 aa12.11□□□□□ -0.47
HDGFL3-206ENST00000568294 CTTNBP2Q8WZ74 1663 aa12.11□□□□□ -0.47
HDGFL3-206ENST00000568294 ST20-MTHFSA0A0A6YYL1 179 aa12.11□□□□□ -0.47
HDGFL3-206ENST00000568294 SKAP1Q86WV1 359 aa12.11□□□□□ -0.47
HDGFL3-206ENST00000568294 PRG4Q92954 1404 aaPredicted RBP12.11□□□□□ -0.47
HDGFL3-206ENST00000568294 USP47Q96K76 1375 aa12.11□□□□□ -0.47
HDGFL3-206ENST00000568294 CC2D1BQ5T0F9 858 aaKnown RBP12.1□□□□□ -0.47
HDGFL3-206ENST00000568294 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
HDGFL3-206ENST00000568294 CUL7Q14999 1698 aa12.1□□□□□ -0.47
HDGFL3-206ENST00000568294 UGGT2Q9NYU1 1516 aa12.09□□□□□ -0.47
HDGFL3-206ENST00000568294 KDM5BQ9UGL1 1544 aa12.09□□□□□ -0.47
HDGFL3-206ENST00000568294 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDGFL3-206ENST00000568294 ANKRD30BQ9BXX2 1392 aa12.09□□□□□ -0.47
HDGFL3-206ENST00000568294 LRRIQ1Q96JM4 1722 aa12.08□□□□□ -0.48
HDGFL3-206ENST00000568294 NUP155O75694 1391 aa12.08□□□□□ -0.48
HDGFL3-206ENST00000568294 DAPK1P53355 1430 aa12.08□□□□□ -0.48
HDGFL3-206ENST00000568294 NCOA1Q15788 1441 aa12.07□□□□□ -0.48
HDGFL3-206ENST00000568294 PLIN1O60240 522 aa12.07□□□□□ -0.48
HDGFL3-206ENST00000568294 ABCC5O15440 1437 aa12.07□□□□□ -0.48
HDGFL3-206ENST00000568294 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
HDGFL3-206ENST00000568294 NOP58Q9Y2X3 529 aaKnown RBP12.06□□□□□ -0.48
HDGFL3-206ENST00000568294 LAS1LQ9Y4W2 734 aaKnown RBP12.06□□□□□ -0.48
HDGFL3-206ENST00000568294 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
HDGFL3-206ENST00000568294 FANCIQ9NVI1 1328 aa12.06□□□□□ -0.48
HDGFL3-206ENST00000568294 DEKP35659 375 aaKnown RBP12.06□□□□□ -0.48
HDGFL3-206ENST00000568294 ANP32AP39687 249 aaKnown RBP12.06□□□□□ -0.48
HDGFL3-206ENST00000568294 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
HDGFL3-206ENST00000568294 TSPY4P0CV99 314 aa12.05□□□□□ -0.48
HDGFL3-206ENST00000568294 TSPY10P0CW01 314 aa12.05□□□□□ -0.48
HDGFL3-206ENST00000568294 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
HDGFL3-206ENST00000568294 PLEKHD1A6NEE1 506 aa12.03□□□□□ -0.48
HDGFL3-206ENST00000568294 SENP3Q9H4L4 574 aaPredicted RBP12.03□□□□□ -0.48
HDGFL3-206ENST00000568294 SAMD9Q5K651 1589 aa12.02□□□□□ -0.48
HDGFL3-206ENST00000568294 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.48
HDGFL3-206ENST00000568294 RTL5Q5HYW3 569 aaPredicted RBP12.02□□□□□ -0.49
HDGFL3-206ENST00000568294 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
HDGFL3-206ENST00000568294 HECW1Q76N89 1606 aa12.01□□□□□ -0.49
HDGFL3-206ENST00000568294 RPRD2Q5VT52 1461 aaKnown RBP12.01□□□□□ -0.49
HDGFL3-206ENST00000568294 PLB1Q6P1J6 1458 aa12.01□□□□□ -0.49
HDGFL3-206ENST00000568294 IQGAP2Q13576 1575 aa12.01□□□□□ -0.49
HDGFL3-206ENST00000568294 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
HDGFL3-206ENST00000568294 NBPF1Q3BBV0 1214 aa12.01□□□□□ -0.49
HDGFL3-206ENST00000568294 ROCK2O75116 1388 aaKnown RBP11.99□□□□□ -0.49
HDGFL3-206ENST00000568294 PNISRQ8TF01 805 aaKnown RBP11.99□□□□□ -0.49
HDGFL3-206ENST00000568294 ABCA5Q8WWZ7 1642 aa11.99□□□□□ -0.49
HDGFL3-206ENST00000568294 MIA2Q96PC5 1412 aa11.98□□□□□ -0.49
HDGFL3-206ENST00000568294 JPH4Q96JJ6 628 aa11.98□□□□□ -0.49
HDGFL3-206ENST00000568294 TEX14Q8IWB6 1497 aa11.97□□□□□ -0.49
HDGFL3-206ENST00000568294 TCOF1Q13428 1488 aaKnown RBP11.97□□□□□ -0.49
HDGFL3-206ENST00000568294 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
HDGFL3-206ENST00000568294 ANKRD30AQ9BXX3 1397 aa11.97□□□□□ -0.49
HDGFL3-206ENST00000568294 RCAN3Q9UKA8 241 aa11.96□□□□□ -0.49
HDGFL3-206ENST00000568294 DHX29Q7Z478 1369 aaKnown RBP11.96□□□□□ -0.49
HDGFL3-206ENST00000568294 ANKRD50Q9ULJ7 1429 aa11.96□□□□□ -0.5
HDGFL3-206ENST00000568294 NUP153P49790 1475 aaKnown RBP11.96□□□□□ -0.5
HDGFL3-206ENST00000568294 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
HDGFL3-206ENST00000568294 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
HDGFL3-206ENST00000568294 ERICH6BQ5W0A0 696 aa11.95□□□□□ -0.5
HDGFL3-206ENST00000568294 WDR62O43379 1518 aa11.94□□□□□ -0.5
HDGFL3-206ENST00000568294 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
HDGFL3-206ENST00000568294 RRP1P56182 461 aaKnown RBP11.94□□□□□ -0.5
HDGFL3-206ENST00000568294 PZPP20742 1482 aa11.93□□□□□ -0.5
HDGFL3-206ENST00000568294 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
HDGFL3-206ENST00000568294 SPATA31E1Q6ZUB1 1445 aa11.93□□□□□ -0.5
HDGFL3-206ENST00000568294 ERCC6Q03468 1493 aa11.92□□□□□ -0.5
HDGFL3-206ENST00000568294 IPO9Q96P70 1041 aaKnown RBP11.92□□□□□ -0.5
HDGFL3-206ENST00000568294 MYBBP1AQ9BQG0 1328 aaKnown RBP11.92□□□□□ -0.5
HDGFL3-206ENST00000568294 PANK3Q9H999 370 aa11.92□□□□□ -0.5
HDGFL3-206ENST00000568294 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
HDGFL3-206ENST00000568294 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
HDGFL3-206ENST00000568294 ROCK1Q13464 1354 aa11.91□□□□□ -0.5
HDGFL3-206ENST00000568294 KIF15Q9NS87 1388 aa11.91□□□□□ -0.5
HDGFL3-206ENST00000568294 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.5
HDGFL3-206ENST00000568294 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
HDGFL3-206ENST00000568294 TROQ12816 1431 aaPredicted RBP11.9□□□□□ -0.5
HDGFL3-206ENST00000568294 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
HDGFL3-206ENST00000568294 RGS3P49796 1198 aa11.9□□□□□ -0.51
HDGFL3-206ENST00000568294 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
HDGFL3-206ENST00000568294 DISP1Q96F81 1524 aa11.89□□□□□ -0.51
HDGFL3-206ENST00000568294 KTN1Q86UP2 1357 aaKnown RBP11.89□□□□□ -0.51
HDGFL3-206ENST00000568294 GPATCH8Q9UKJ3 1502 aaKnown RBP11.89□□□□□ -0.51
HDGFL3-206ENST00000568294 NEFMP07197 916 aa11.88□□□□□ -0.51
HDGFL3-206ENST00000568294 TNNT2P45379 298 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms