RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 PRDM2Q13029 1718 aa9.7□□□□□ -0.86
SF3B3-210ENST00000567654 NLRP6P59044 892 aa9.69□□□□□ -0.86
SF3B3-210ENST00000567654 ABCC8Q09428 1581 aa9.69□□□□□ -0.86
SF3B3-210ENST00000567654 DPY19L2Q6NUT2 758 aa9.69□□□□□ -0.86
SF3B3-210ENST00000567654 PLSCR2Q9NRY7 297 aa9.69□□□□□ -0.86
SF3B3-210ENST00000567654 COLQQ9Y215 455 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-210ENST00000567654 POTEFA5A3E0 1075 aa9.67□□□□□ -0.86
SF3B3-210ENST00000567654 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
SF3B3-210ENST00000567654 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
SF3B3-210ENST00000567654 METRNQ9UJH8 293 aa9.66□□□□□ -0.86
SF3B3-210ENST00000567654 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.86
SF3B3-210ENST00000567654 SEC24BO95487 1268 aa9.64□□□□□ -0.87
SF3B3-210ENST00000567654 IER5LQ5T953 404 aa9.64□□□□□ -0.87
SF3B3-210ENST00000567654 SLC39A7Q92504 469 aa9.64□□□□□ -0.87
SF3B3-210ENST00000567654 SLC24A1O60721 1099 aa9.63□□□□□ -0.87
SF3B3-210ENST00000567654 ILDR1Q86SU0 546 aaPredicted RBP9.63□□□□□ -0.87
SF3B3-210ENST00000567654 PLCG2P16885 1265 aa9.62□□□□□ -0.87
SF3B3-210ENST00000567654 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
SF3B3-210ENST00000567654 C7P10643 843 aa9.61□□□□□ -0.87
SF3B3-210ENST00000567654 LHX8Q68G74 356 aa9.61□□□□□ -0.87
SF3B3-210ENST00000567654 RYDENQ9NUL5 291 aaKnown RBP9.61□□□□□ -0.87
SF3B3-210ENST00000567654 SYNJ1O43426 1573 aa9.58□□□□□ -0.88
SF3B3-210ENST00000567654 CADPS2Q86UW7 1296 aa9.58□□□□□ -0.88
SF3B3-210ENST00000567654 BIVM-ERCC5R4GMW8 1640 aa9.54□□□□□ -0.88
SF3B3-210ENST00000567654 POTEB2H3BUK9 544 aa9.54□□□□□ -0.88
SF3B3-210ENST00000567654 MICALL2Q8IY33 904 aa9.53□□□□□ -0.88
SF3B3-210ENST00000567654 CFTRP13569 1480 aa9.53□□□□□ -0.88
SF3B3-210ENST00000567654 KDM2AQ9Y2K7 1162 aa9.52□□□□□ -0.89
SF3B3-210ENST00000567654 BOLA1Q9Y3E2 137 aa9.52□□□□□ -0.89
SF3B3-210ENST00000567654 WRNQ14191 1432 aaPredicted RBP eCLIP9.5□□□□□ -0.89
SF3B3-210ENST00000567654 TOP2BQ02880 1626 aa9.5□□□□□ -0.89
SF3B3-210ENST00000567654 POTEJP0CG39 1038 aa9.5□□□□□ -0.89
SF3B3-210ENST00000567654 G3V3G9 751 aa9.48□□□□□ -0.89
SF3B3-210ENST00000567654 NESP48681 1621 aa9.48□□□□□ -0.89
SF3B3-210ENST00000567654 CUX1P39880 1505 aa9.47□□□□□ -0.89
SF3B3-210ENST00000567654 L3MBTL3Q96JM7 780 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-210ENST00000567654 KIF21AQ7Z4S6 1674 aa9.47□□□□□ -0.89
SF3B3-210ENST00000567654 RUSC2Q8N2Y8 1516 aa9.46□□□□□ -0.89
SF3B3-210ENST00000567654 LOC105371045A0A1W2PR82 267 aa9.46□□□□□ -0.9
SF3B3-210ENST00000567654 TMEM121BQ9BXQ6 578 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-210ENST00000567654 NCKAP5LQ9HCH0 1330 aa9.46□□□□□ -0.9
SF3B3-210ENST00000567654 FAM9AQ8IZU1 332 aaPredicted RBP9.45□□□□□ -0.9
SF3B3-210ENST00000567654 CADPSQ9ULU8 1353 aa9.45□□□□□ -0.9
SF3B3-210ENST00000567654 TMEM92Q6UXU6 159 aa9.44□□□□□ -0.9
SF3B3-210ENST00000567654 SOGA1O94964 1423 aa9.44□□□□□ -0.9
SF3B3-210ENST00000567654 LAMC3Q9Y6N6 1575 aa9.44□□□□□ -0.9
SF3B3-210ENST00000567654 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
SF3B3-210ENST00000567654 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
SF3B3-210ENST00000567654 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
SF3B3-210ENST00000567654 CRISPLD2Q9H0B8 497 aa9.4□□□□□ -0.9
SF3B3-210ENST00000567654 FANCD2Q9BXW9 1451 aa9.4□□□□□ -0.91
SF3B3-210ENST00000567654 C2orf72A6NCS6 295 aa9.39□□□□□ -0.91
SF3B3-210ENST00000567654 PDE4AP27815 886 aa9.37□□□□□ -0.91
SF3B3-210ENST00000567654 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
SF3B3-210ENST00000567654 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
SF3B3-210ENST00000567654 DNMBPQ6XZF7 1577 aa9.36□□□□□ -0.91
SF3B3-210ENST00000567654 WDR97A6NE52 1622 aa9.35□□□□□ -0.91
SF3B3-210ENST00000567654 DSG2Q14126 1118 aa9.35□□□□□ -0.91
SF3B3-210ENST00000567654 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
SF3B3-210ENST00000567654 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
SF3B3-210ENST00000567654 KIF3CO14782 793 aa9.34□□□□□ -0.91
SF3B3-210ENST00000567654 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
SF3B3-210ENST00000567654 KIF21BO75037 1637 aa9.34□□□□□ -0.91
SF3B3-210ENST00000567654 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
SF3B3-210ENST00000567654 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
SF3B3-210ENST00000567654 CEP164Q9UPV0 1460 aa9.33□□□□□ -0.92
SF3B3-210ENST00000567654 EEA1Q15075 1411 aa9.32□□□□□ -0.92
SF3B3-210ENST00000567654 TOPBP1Q92547 1522 aa9.32□□□□□ -0.92
SF3B3-210ENST00000567654 MFSD10Q14728 455 aa9.32□□□□□ -0.92
SF3B3-210ENST00000567654 PPP1R15BQ5SWA1 713 aa9.32□□□□□ -0.92
SF3B3-210ENST00000567654 SLAIN1Q8ND83 568 aa9.32□□□□□ -0.92
SF3B3-210ENST00000567654 OTUD5Q96G74 571 aa9.32□□□□□ -0.92
SF3B3-210ENST00000567654 PLPP6Q8IY26 295 aa9.31□□□□□ -0.92
SF3B3-210ENST00000567654 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
SF3B3-210ENST00000567654 FOXK1P85037 733 aa9.29□□□□□ -0.92
SF3B3-210ENST00000567654 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
SF3B3-210ENST00000567654 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
SF3B3-210ENST00000567654 MAMSTRQ6ZN01 415 aa9.27□□□□□ -0.93
SF3B3-210ENST00000567654 GOLGA3Q08378 1498 aa9.27□□□□□ -0.93
SF3B3-210ENST00000567654 RAD54L2Q9Y4B4 1467 aa9.27□□□□□ -0.93
SF3B3-210ENST00000567654 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
SF3B3-210ENST00000567654 E2F4Q16254 413 aa9.26□□□□□ -0.93
SF3B3-210ENST00000567654 UPF1Q92900 1129 aaKnown RBP eCLIP9.25□□□□□ -0.93
SF3B3-210ENST00000567654 EMILIN3Q9NT22 766 aa9.25□□□□□ -0.93
SF3B3-210ENST00000567654 CUX2O14529 1486 aa9.25□□□□□ -0.93
SF3B3-210ENST00000567654 RAPGEF2Q9Y4G8 1499 aa9.25□□□□□ -0.93
SF3B3-210ENST00000567654 THOC2Q8NI27 1593 aaKnown RBP9.24□□□□□ -0.93
SF3B3-210ENST00000567654 TARBP1Q13395 1621 aaKnown RBP9.24□□□□□ -0.93
SF3B3-210ENST00000567654 ABCA5Q8WWZ7 1642 aa9.23□□□□□ -0.93
SF3B3-210ENST00000567654 PBRM1Q86U86 1689 aa9.23□□□□□ -0.93
SF3B3-210ENST00000567654 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
SF3B3-210ENST00000567654 PRXQ9BXM0 1461 aa9.22□□□□□ -0.93
SF3B3-210ENST00000567654 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
SF3B3-210ENST00000567654 ABCA10Q8WWZ4 1543 aa9.22□□□□□ -0.93
SF3B3-210ENST00000567654 MRC2Q9UBG0 1479 aa9.21□□□□□ -0.93
SF3B3-210ENST00000567654 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
SF3B3-210ENST00000567654 TNIKQ9UKE5 1360 aa9.21□□□□□ -0.94
SF3B3-210ENST00000567654 WDR62O43379 1518 aa9.21□□□□□ -0.94
SF3B3-210ENST00000567654 CEP162Q5TB80 1403 aa9.2□□□□□ -0.94
SF3B3-210ENST00000567654 DPYSL4O14531 572 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms