RNA–Protein interactions for RNA: ENST00000567437.1

SNUPN-208, Transcript of snurportin 1, humanhuman

TSL 2

Gene SNUPN, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-208ENST00000567437 PREX1Q8TCU6 1659 aa13.95□□□□□ -0.18
SNUPN-208ENST00000567437 RAPGEF2Q9Y4G8 1499 aa13.94□□□□□ -0.18
SNUPN-208ENST00000567437 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
SNUPN-208ENST00000567437 SIGLEC1Q9BZZ2 1709 aa13.91□□□□□ -0.18
SNUPN-208ENST00000567437 FER1L4A9Z1Z3 1794 aa13.91□□□□□ -0.18
SNUPN-208ENST00000567437 STRCQ7RTU9 1775 aa13.91□□□□□ -0.18
SNUPN-208ENST00000567437 AKNAQ7Z591 1439 aa13.9□□□□□ -0.19
SNUPN-208ENST00000567437 RICTORQ6R327 1708 aa13.89□□□□□ -0.19
SNUPN-208ENST00000567437 PTPRTO14522 1441 aa13.87□□□□□ -0.19
SNUPN-208ENST00000567437 EFCAB5A4FU69 1503 aa13.86□□□□□ -0.19
SNUPN-208ENST00000567437 ZMYM4Q5VZL5 1548 aa13.86□□□□□ -0.19
SNUPN-208ENST00000567437 FHOD3Q2V2M9 1422 aa13.86□□□□□ -0.19
SNUPN-208ENST00000567437 DENND4BO75064 1496 aaPredicted RBP13.86□□□□□ -0.19
SNUPN-208ENST00000567437 ATP10BO94823 1461 aa13.85□□□□□ -0.19
SNUPN-208ENST00000567437 LTBP4Q8N2S1 1624 aa13.84□□□□□ -0.19
SNUPN-208ENST00000567437 ZFYVE16Q7Z3T8 1539 aa13.84□□□□□ -0.19
SNUPN-208ENST00000567437 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.19
SNUPN-208ENST00000567437 MAGI2Q86UL8 1455 aa13.83□□□□□ -0.2
SNUPN-208ENST00000567437 ARHGEF12Q9NZN5 1544 aa13.82□□□□□ -0.2
SNUPN-208ENST00000567437 UHRF1BP1Q6BDS2 1440 aa13.81□□□□□ -0.2
SNUPN-208ENST00000567437 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
SNUPN-208ENST00000567437 FAM9AQ8IZU1 332 aaPredicted RBP13.8□□□□□ -0.2
SNUPN-208ENST00000567437 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
SNUPN-208ENST00000567437 MLECQ14165 292 aa13.78□□□□□ -0.2
SNUPN-208ENST00000567437 RAPGEF6Q8TEU7 1601 aa13.76□□□□□ -0.21
SNUPN-208ENST00000567437 SETD1BQ9UPS6 1966 aaKnown RBP13.76□□□□□ -0.21
SNUPN-208ENST00000567437 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
SNUPN-208ENST00000567437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
SNUPN-208ENST00000567437 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
SNUPN-208ENST00000567437 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
SNUPN-208ENST00000567437 C9orf84Q5VXU9 1444 aa13.72□□□□□ -0.21
SNUPN-208ENST00000567437 CEBPAP49715 358 aaPredicted RBP13.71□□□□□ -0.21
SNUPN-208ENST00000567437 ATP10AO60312 1499 aa13.7□□□□□ -0.22
SNUPN-208ENST00000567437 NCOA1Q15788 1441 aa13.7□□□□□ -0.22
SNUPN-208ENST00000567437 NUP153P49790 1475 aaKnown RBP13.69□□□□□ -0.22
SNUPN-208ENST00000567437 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
SNUPN-208ENST00000567437 SAMD9Q5K651 1589 aa13.69□□□□□ -0.22
SNUPN-208ENST00000567437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNUPN-208ENST00000567437 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
SNUPN-208ENST00000567437 C3P01024 1663 aa13.65□□□□□ -0.22
SNUPN-208ENST00000567437 CAPN15O75808 1086 aa13.63□□□□□ -0.23
SNUPN-208ENST00000567437 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
SNUPN-208ENST00000567437 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
SNUPN-208ENST00000567437 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
SNUPN-208ENST00000567437 SCAPERQ9BY12 1400 aa13.61□□□□□ -0.23
SNUPN-208ENST00000567437 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
SNUPN-208ENST00000567437 CAMSAP1Q5T5Y3 1602 aa13.61□□□□□ -0.23
SNUPN-208ENST00000567437 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
SNUPN-208ENST00000567437 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
SNUPN-208ENST00000567437 ZNF335Q9H4Z2 1342 aaPredicted RBP13.59□□□□□ -0.23
SNUPN-208ENST00000567437 HSPA1LP34931 641 aa13.58□□□□□ -0.24
SNUPN-208ENST00000567437 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
SNUPN-208ENST00000567437 AGLP35573 1532 aa13.56□□□□□ -0.24
SNUPN-208ENST00000567437 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
SNUPN-208ENST00000567437 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
SNUPN-208ENST00000567437 PLCH2O75038 1416 aa13.56□□□□□ -0.24
SNUPN-208ENST00000567437 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
SNUPN-208ENST00000567437 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
SNUPN-208ENST00000567437 KDM5CP41229 1560 aa13.55□□□□□ -0.24
SNUPN-208ENST00000567437 NPATQ14207 1427 aa13.55□□□□□ -0.24
SNUPN-208ENST00000567437 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
SNUPN-208ENST00000567437 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
SNUPN-208ENST00000567437 PKD2Q13563 968 aa13.53□□□□□ -0.24
SNUPN-208ENST00000567437 TOM1O60784 492 aa13.52□□□□□ -0.25
SNUPN-208ENST00000567437 APLP2Q06481 763 aa13.52□□□□□ -0.25
SNUPN-208ENST00000567437 ZNF142P52746 1687 aaPredicted RBP13.52□□□□□ -0.25
SNUPN-208ENST00000567437 MROH2AA6NES4 1674 aa13.51□□□□□ -0.25
SNUPN-208ENST00000567437 ABCA6Q8N139 1617 aa13.51□□□□□ -0.25
SNUPN-208ENST00000567437 TCOF1Q13428 1488 aaKnown RBP13.51□□□□□ -0.25
SNUPN-208ENST00000567437 DSG3P32926 999 aa13.51□□□□□ -0.25
SNUPN-208ENST00000567437 CPS1P31327 1500 aa13.5□□□□□ -0.25
SNUPN-208ENST00000567437 KIF14Q15058 1648 aa13.5□□□□□ -0.25
SNUPN-208ENST00000567437 NCKAP5LQ9HCH0 1330 aa13.49□□□□□ -0.25
SNUPN-208ENST00000567437 PIP4K2BP78356 416 aa13.49□□□□□ -0.25
SNUPN-208ENST00000567437 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
SNUPN-208ENST00000567437 EFCAB2Q5VUJ9 269 aa13.48□□□□□ -0.25
SNUPN-208ENST00000567437 AFAP1Q8N556 730 aa13.47□□□□□ -0.25
SNUPN-208ENST00000567437 MLH3Q9UHC1 1453 aa13.47□□□□□ -0.25
SNUPN-208ENST00000567437 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.25
SNUPN-208ENST00000567437 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
SNUPN-208ENST00000567437 PTPRKQ15262 1439 aa13.46□□□□□ -0.26
SNUPN-208ENST00000567437 CEP170BQ9Y4F5 1589 aaPredicted RBP13.45□□□□□ -0.26
SNUPN-208ENST00000567437 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
SNUPN-208ENST00000567437 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
SNUPN-208ENST00000567437 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
SNUPN-208ENST00000567437 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
SNUPN-208ENST00000567437 KIDINS220Q9ULH0 1771 aa13.4□□□□□ -0.26
SNUPN-208ENST00000567437 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
SNUPN-208ENST00000567437 ZMYM3Q14202 1370 aa13.4□□□□□ -0.26
SNUPN-208ENST00000567437 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
SNUPN-208ENST00000567437 ITSN2Q9NZM3 1697 aa13.4□□□□□ -0.26
SNUPN-208ENST00000567437 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
SNUPN-208ENST00000567437 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
SNUPN-208ENST00000567437 POLR1AO95602 1720 aaPredicted RBP13.39□□□□□ -0.27
SNUPN-208ENST00000567437 CLTCQ00610 1675 aaKnown RBP13.38□□□□□ -0.27
SNUPN-208ENST00000567437 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
SNUPN-208ENST00000567437 RGS17Q9UGC6 210 aaPredicted RBP13.37□□□□□ -0.27
SNUPN-208ENST00000567437 ABCC1P33527 1531 aa13.35□□□□□ -0.27
SNUPN-208ENST00000567437 PREX2Q70Z35 1606 aa13.35□□□□□ -0.27
SNUPN-208ENST00000567437 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms