RNA–Protein interactions for RNA: ENST00000565253.1

C16orf46-204, Transcript of chromosome 16 open reading frame 46, humanhuman

TSL 3

Gene C16orf46, Length 479 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf46-204ENST00000565253 PREX1Q8TCU6 1659 aa27.36■■□□□ 1.97
C16orf46-204ENST00000565253 ATP10AO60312 1499 aa27.35■■□□□ 1.97
C16orf46-204ENST00000565253 CEBPAP49715 358 aaPredicted RBP27.34■■□□□ 1.97
C16orf46-204ENST00000565253 ARHGEF12Q9NZN5 1544 aa27.33■■□□□ 1.97
C16orf46-204ENST00000565253 C9orf84Q5VXU9 1444 aa27.33■■□□□ 1.96
C16orf46-204ENST00000565253 SCAPERQ9BY12 1400 aa27.33■■□□□ 1.96
C16orf46-204ENST00000565253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.32■■□□□ 1.96
C16orf46-204ENST00000565253 PTPRTO14522 1441 aa27.32■■□□□ 1.96
C16orf46-204ENST00000565253 HECW1Q76N89 1606 aa27.31■■□□□ 1.96
C16orf46-204ENST00000565253 IQSEC2Q5JU85 1478 aa27.26■■□□□ 1.95
C16orf46-204ENST00000565253 PLCH2O75038 1416 aa27.25■■□□□ 1.95
C16orf46-204ENST00000565253 SIGLEC1Q9BZZ2 1709 aa27.25■■□□□ 1.95
C16orf46-204ENST00000565253 EFCAB2Q5VUJ9 269 aa27.25■■□□□ 1.95
C16orf46-204ENST00000565253 ESF1Q9H501 851 aaKnown RBP27.25■■□□□ 1.95
C16orf46-204ENST00000565253 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
C16orf46-204ENST00000565253 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
C16orf46-204ENST00000565253 STRCQ7RTU9 1775 aa27.21■■□□□ 1.95
C16orf46-204ENST00000565253 MYT1LQ9UL68 1186 aa27.2■■□□□ 1.94
C16orf46-204ENST00000565253 SETD1BQ9UPS6 1966 aaKnown RBP27.15■■□□□ 1.94
C16orf46-204ENST00000565253 ZNF518AQ6AHZ1 1483 aa27.14■■□□□ 1.94
C16orf46-204ENST00000565253 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
C16orf46-204ENST00000565253 TRAPPC8Q9Y2L5 1435 aa27.12■■□□□ 1.93
C16orf46-204ENST00000565253 LTBP4Q8N2S1 1624 aa27.12■■□□□ 1.93
C16orf46-204ENST00000565253 UBAP1LF5GYI3 381 aa27.08■■□□□ 1.93
C16orf46-204ENST00000565253 AFAP1Q8N556 730 aa27.07■■□□□ 1.92
C16orf46-204ENST00000565253 NCOA1Q15788 1441 aa27.06■■□□□ 1.92
C16orf46-204ENST00000565253 CNTLNQ9NXG0 1405 aa27.01■■□□□ 1.91
C16orf46-204ENST00000565253 ATP1B4Q9UN42 357 aaPredicted RBP27.01■■□□□ 1.91
C16orf46-204ENST00000565253 CDK13Q14004 1512 aaKnown RBP27■■□□□ 1.91
C16orf46-204ENST00000565253 REREQ9P2R6 1566 aa27■■□□□ 1.91
C16orf46-204ENST00000565253 KDM5CP41229 1560 aa26.97■■□□□ 1.91
C16orf46-204ENST00000565253 AGLP35573 1532 aa26.96■■□□□ 1.91
C16orf46-204ENST00000565253 ARHGAP5Q13017 1502 aa26.95■■□□□ 1.91
C16orf46-204ENST00000565253 MLH3Q9UHC1 1453 aa26.95■■□□□ 1.91
C16orf46-204ENST00000565253 EEA1Q15075 1411 aa26.95■■□□□ 1.9
C16orf46-204ENST00000565253 MYO5CQ9NQX4 1742 aa26.95■■□□□ 1.9
C16orf46-204ENST00000565253 C3P01024 1663 aa26.95■■□□□ 1.9
C16orf46-204ENST00000565253 NPATQ14207 1427 aa26.93■■□□□ 1.9
C16orf46-204ENST00000565253 PKD2Q13563 968 aa26.93■■□□□ 1.9
C16orf46-204ENST00000565253 DIP2CQ9Y2E4 1556 aa26.92■■□□□ 1.9
C16orf46-204ENST00000565253 ZNF335Q9H4Z2 1342 aaPredicted RBP26.92■■□□□ 1.9
C16orf46-204ENST00000565253 CLIP1P30622 1438 aa26.91■■□□□ 1.9
C16orf46-204ENST00000565253 CAMSAP1Q5T5Y3 1602 aa26.9■■□□□ 1.9
C16orf46-204ENST00000565253 FMN1Q68DA7 1419 aa26.9■■□□□ 1.9
C16orf46-204ENST00000565253 NCKAP5LQ9HCH0 1330 aa26.89■■□□□ 1.89
C16orf46-204ENST00000565253 KIF14Q15058 1648 aa26.87■■□□□ 1.89
C16orf46-204ENST00000565253 TROQ12816 1431 aaPredicted RBP26.86■■□□□ 1.89
C16orf46-204ENST00000565253 SCAF1Q9H7N4 1312 aaKnown RBP26.83■■□□□ 1.89
C16orf46-204ENST00000565253 ZMYM3Q14202 1370 aa26.83■■□□□ 1.88
C16orf46-204ENST00000565253 TOM1O60784 492 aa26.82■■□□□ 1.88
C16orf46-204ENST00000565253 ABCA6Q8N139 1617 aa26.81■■□□□ 1.88
C16orf46-204ENST00000565253 PLA2R1Q13018 1463 aa26.81■■□□□ 1.88
C16orf46-204ENST00000565253 PHF23Q9BUL5 403 aaPredicted RBP26.8■■□□□ 1.88
C16orf46-204ENST00000565253 PPP6R1Q9UPN7 881 aa26.79■■□□□ 1.88
C16orf46-204ENST00000565253 HSPA1LP34931 641 aa26.78■■□□□ 1.88
C16orf46-204ENST00000565253 PIP4K2BP78356 416 aa26.75■■□□□ 1.87
C16orf46-204ENST00000565253 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
C16orf46-204ENST00000565253 MED1Q15648 1581 aaPredicted RBP26.73■■□□□ 1.87
C16orf46-204ENST00000565253 MROH2AA6NES4 1674 aa26.72■■□□□ 1.87
C16orf46-204ENST00000565253 TCOF1Q13428 1488 aaKnown RBP26.71■■□□□ 1.87
C16orf46-204ENST00000565253 ABCC1P33527 1531 aa26.7■■□□□ 1.86
C16orf46-204ENST00000565253 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
C16orf46-204ENST00000565253 SPAG9O60271 1321 aaKnown RBP26.66■■□□□ 1.86
C16orf46-204ENST00000565253 CEP170BQ9Y4F5 1589 aaPredicted RBP26.63■■□□□ 1.85
C16orf46-204ENST00000565253 CPS1P31327 1500 aa26.63■■□□□ 1.85
C16orf46-204ENST00000565253 KIDINS220Q9ULH0 1771 aa26.62■■□□□ 1.85
C16orf46-204ENST00000565253 PTPRKQ15262 1439 aa26.62■■□□□ 1.85
C16orf46-204ENST00000565253 ZNF142P52746 1687 aaPredicted RBP26.61■■□□□ 1.85
C16orf46-204ENST00000565253 CDC42BPBQ9Y5S2 1711 aa26.61■■□□□ 1.85
C16orf46-204ENST00000565253 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
C16orf46-204ENST00000565253 GGT6Q6P531 493 aa26.6■■□□□ 1.85
C16orf46-204ENST00000565253 ZNF777Q9ULD5 760 aaPredicted RBP26.6■■□□□ 1.85
C16orf46-204ENST00000565253 MYO3AQ8NEV4 1616 aa26.6■■□□□ 1.85
C16orf46-204ENST00000565253 ITSN2Q9NZM3 1697 aa26.6■■□□□ 1.85
C16orf46-204ENST00000565253 ARHGAP35Q9NRY4 1499 aa26.58■■□□□ 1.85
C16orf46-204ENST00000565253 A2ML1A8K2U0 1454 aa26.55■■□□□ 1.84
C16orf46-204ENST00000565253 SHANK2Q9UPX8 1470 aa26.55■■□□□ 1.84
C16orf46-204ENST00000565253 SAMD9LQ8IVG5 1584 aa26.54■■□□□ 1.84
C16orf46-204ENST00000565253 CCDC18Q5T9S5 1454 aa26.54■■□□□ 1.84
C16orf46-204ENST00000565253 A2MP01023 1474 aa26.53■■□□□ 1.84
C16orf46-204ENST00000565253 SUPT6HQ7KZ85 1726 aaKnown RBP26.53■■□□□ 1.84
C16orf46-204ENST00000565253 ANKLE2Q86XL3 938 aa26.51■■□□□ 1.83
C16orf46-204ENST00000565253 CLTCQ00610 1675 aaKnown RBP26.5■■□□□ 1.83
C16orf46-204ENST00000565253 HNRNPMP52272 730 aaKnown RBP eCLIP26.5■■□□□ 1.83
C16orf46-204ENST00000565253 EHMT2Q96KQ7 1210 aa26.48■■□□□ 1.83
C16orf46-204ENST00000565253 PLEKHH2Q8IVE3 1493 aa26.48■■□□□ 1.83
C16orf46-204ENST00000565253 ATP7AQ04656 1500 aa26.47■■□□□ 1.83
C16orf46-204ENST00000565253 KIAA1107Q9UPP5 1409 aa26.47■■□□□ 1.83
C16orf46-204ENST00000565253 THEMISQ8N1K5 641 aaPredicted RBP26.45■■□□□ 1.82
C16orf46-204ENST00000565253 SYCP2Q9BX26 1530 aa26.44■■□□□ 1.82
C16orf46-204ENST00000565253 PLXNC1O60486 1568 aa26.44■■□□□ 1.82
C16orf46-204ENST00000565253 DNMT1P26358 1616 aaKnown RBP26.43■■□□□ 1.82
C16orf46-204ENST00000565253 CASKIN1Q8WXD9 1431 aa26.43■■□□□ 1.82
C16orf46-204ENST00000565253 CFDP1Q9UEE9 299 aaPredicted RBP26.43■■□□□ 1.82
C16orf46-204ENST00000565253 TNRQ92752 1358 aa26.41■■□□□ 1.82
C16orf46-204ENST00000565253 GPATCH8Q9UKJ3 1502 aaKnown RBP26.39■■□□□ 1.81
C16orf46-204ENST00000565253 CDC42BPAQ5VT25 1732 aa26.37■■□□□ 1.81
C16orf46-204ENST00000565253 SENP3Q9H4L4 574 aaPredicted RBP26.35■■□□□ 1.81
C16orf46-204ENST00000565253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.34■■□□□ 1.81
C16orf46-204ENST00000565253 LRRIQ1Q96JM4 1722 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms