RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 MAPKBP1O60336 1514 aa7.62□□□□□ -1.19
TCF4-218ENST00000563686 IQGAP2Q13576 1575 aa7.62□□□□□ -1.19
TCF4-218ENST00000563686 KCNH8Q96L42 1107 aa7.62□□□□□ -1.19
TCF4-218ENST00000563686 CNTLNQ9NXG0 1405 aa7.62□□□□□ -1.19
TCF4-218ENST00000563686 ZBTB47Q9UFB7 747 aaPredicted RBP7.61□□□□□ -1.19
TCF4-218ENST00000563686 IFT140Q96RY7 1462 aa7.61□□□□□ -1.19
TCF4-218ENST00000563686 ROCK2O75116 1388 aaKnown RBP7.6□□□□□ -1.19
TCF4-218ENST00000563686 SALL2Q9Y467 1007 aaPredicted RBP7.6□□□□□ -1.19
TCF4-218ENST00000563686 PKD2Q13563 968 aa7.6□□□□□ -1.19
TCF4-218ENST00000563686 DDRGK1Q96HY6 314 aa7.59□□□□□ -1.19
TCF4-218ENST00000563686 RBM19Q9Y4C8 960 aaKnown RBP7.59□□□□□ -1.19
TCF4-218ENST00000563686 PBRM1Q86U86 1689 aa7.59□□□□□ -1.19
TCF4-218ENST00000563686 MIA2Q96PC5 1412 aa7.59□□□□□ -1.19
TCF4-218ENST00000563686 L3MBTL2Q969R5 705 aa7.59□□□□□ -1.19
TCF4-218ENST00000563686 KTN1Q86UP2 1357 aaKnown RBP7.59□□□□□ -1.19
TCF4-218ENST00000563686 CDCA8Q53HL2 280 aa7.58□□□□□ -1.2
TCF4-218ENST00000563686 RALBP1Q15311 655 aa7.58□□□□□ -1.2
TCF4-218ENST00000563686 URB2Q14146 1524 aaKnown RBP7.58□□□□□ -1.2
TCF4-218ENST00000563686 NBR1Q14596 966 aa7.58□□□□□ -1.2
TCF4-218ENST00000563686 DCAF11Q8TEB1 546 aa7.58□□□□□ -1.2
TCF4-218ENST00000563686 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
TCF4-218ENST00000563686 DAPK1P53355 1430 aa7.57□□□□□ -1.2
TCF4-218ENST00000563686 NUP155O75694 1391 aa7.57□□□□□ -1.2
TCF4-218ENST00000563686 KANK1Q14678 1352 aa7.57□□□□□ -1.2
TCF4-218ENST00000563686 EPRSP07814 1512 aaKnown RBP7.57□□□□□ -1.2
TCF4-218ENST00000563686 UGGT2Q9NYU1 1516 aa7.56□□□□□ -1.2
TCF4-218ENST00000563686 CDK13Q14004 1512 aaKnown RBP7.56□□□□□ -1.2
TCF4-218ENST00000563686 NOP58Q9Y2X3 529 aaKnown RBP7.56□□□□□ -1.2
TCF4-218ENST00000563686 TMF1P82094 1093 aa7.56□□□□□ -1.2
TCF4-218ENST00000563686 RGL3Q3MIN7 710 aa7.56□□□□□ -1.2
TCF4-218ENST00000563686 SNAPC4Q5SXM2 1469 aa7.56□□□□□ -1.2
TCF4-218ENST00000563686 KNSTRNQ9Y448 316 aa7.56□□□□□ -1.2
TCF4-218ENST00000563686 CHGAP10645 457 aaKnown RBP7.55□□□□□ -1.2
TCF4-218ENST00000563686 CCDC7Q96M83 1385 aa7.55□□□□□ -1.2
TCF4-218ENST00000563686 CC2D1BQ5T0F9 858 aaKnown RBP7.55□□□□□ -1.2
TCF4-218ENST00000563686 ITSN2Q9NZM3 1697 aa7.55□□□□□ -1.2
TCF4-218ENST00000563686 NEFMP07197 916 aa7.55□□□□□ -1.2
TCF4-218ENST00000563686 B4GALNT3Q6L9W6 998 aa7.55□□□□□ -1.2
TCF4-218ENST00000563686 NUDCQ9Y266 331 aa7.54□□□□□ -1.2
TCF4-218ENST00000563686 USP47Q96K76 1375 aa7.54□□□□□ -1.2
TCF4-218ENST00000563686 KIF14Q15058 1648 aa7.54□□□□□ -1.2
TCF4-218ENST00000563686 ZBED9Q6R2W3 1325 aa7.53□□□□□ -1.2
TCF4-218ENST00000563686 ROCK1Q13464 1354 aa7.53□□□□□ -1.2
TCF4-218ENST00000563686 ARID4BQ4LE39 1312 aaPredicted RBP7.53□□□□□ -1.2
TCF4-218ENST00000563686 ADAMTS12P58397 1594 aa7.53□□□□□ -1.2
TCF4-218ENST00000563686 NAIPQ13075 1403 aa7.53□□□□□ -1.2
TCF4-218ENST00000563686 RAPGEF6Q8TEU7 1601 aa7.53□□□□□ -1.2
TCF4-218ENST00000563686 EIF3AQ14152 1382 aaKnown RBP7.53□□□□□ -1.2
TCF4-218ENST00000563686 CAMSAP2Q08AD1 1489 aa7.53□□□□□ -1.2
TCF4-218ENST00000563686 TCOF1Q13428 1488 aaKnown RBP7.53□□□□□ -1.2
TCF4-218ENST00000563686 NPM1P06748 294 aaKnown RBP eCLIP7.53□□□□□ -1.2
TCF4-218ENST00000563686 ABCA5Q8WWZ7 1642 aa7.52□□□□□ -1.2
TCF4-218ENST00000563686 MYBBP1AQ9BQG0 1328 aaKnown RBP7.52□□□□□ -1.2
TCF4-218ENST00000563686 SAMD9Q5K651 1589 aa7.52□□□□□ -1.21
TCF4-218ENST00000563686 GCC2Q8IWJ2 1684 aa7.52□□□□□ -1.21
TCF4-218ENST00000563686 HNRNPMP52272 730 aaKnown RBP eCLIP7.52□□□□□ -1.217e-6■■■□□ 17
TCF4-218ENST00000563686 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
TCF4-218ENST00000563686 RSPH4AQ5TD94 716 aa7.51□□□□□ -1.21
TCF4-218ENST00000563686 WASHC2AQ641Q2 1341 aa7.51□□□□□ -1.21
TCF4-218ENST00000563686 PRKRIP1Q9H875 184 aaPredicted RBP7.51□□□□□ -1.21
TCF4-218ENST00000563686 CCDC144AA2RUR9 1427 aa7.51□□□□□ -1.21
TCF4-218ENST00000563686 KIAA1107Q9UPP5 1409 aa7.5□□□□□ -1.21
TCF4-218ENST00000563686 SENP3-EIF4A1A0A087X0R7 540 aa7.5□□□□□ -1.21
TCF4-218ENST00000563686 WDR62O43379 1518 aa7.49□□□□□ -1.21
TCF4-218ENST00000563686 KIF7Q2M1P5 1343 aa7.49□□□□□ -1.21
TCF4-218ENST00000563686 ARHGAP5Q13017 1502 aa7.49□□□□□ -1.21
TCF4-218ENST00000563686 KIAA0586Q9BVV6 1533 aa7.49□□□□□ -1.21
TCF4-218ENST00000563686 ADGBQ8N7X0 1667 aa7.49□□□□□ -1.21
TCF4-218ENST00000563686 KIAA0556O60303 1618 aa7.49□□□□□ -1.21
TCF4-218ENST00000563686 TROQ12816 1431 aaPredicted RBP7.48□□□□□ -1.21
TCF4-218ENST00000563686 JPH4Q96JJ6 628 aa7.48□□□□□ -1.21
TCF4-218ENST00000563686 SYNJ2O15056 1496 aa7.48□□□□□ -1.21
TCF4-218ENST00000563686 AKNAQ7Z591 1439 aa7.48□□□□□ -1.21
TCF4-218ENST00000563686 RCAN3Q9UKA8 241 aa7.48□□□□□ -1.21
TCF4-218ENST00000563686 CFAP53Q96M91 514 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 ANKRD50Q9ULJ7 1429 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 SLC24A1O60721 1099 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 C9orf84Q5VXU9 1444 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 ZNF644Q9H582 1327 aaPredicted RBP7.47□□□□□ -1.21
TCF4-218ENST00000563686 STAG3Q9UJ98 1225 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 ABCC5O15440 1437 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 PPM1GO15355 546 aaPredicted RBP7.47□□□□□ -1.21
TCF4-218ENST00000563686 PTPRGP23470 1445 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 FANCIQ9NVI1 1328 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 GRIN2AQ12879 1464 aa7.47□□□□□ -1.21
TCF4-218ENST00000563686 BECN1Q14457 450 aa7.46□□□□□ -1.21
TCF4-218ENST00000563686 PRG4Q92954 1404 aaPredicted RBP7.46□□□□□ -1.21
TCF4-218ENST00000563686 DNMT1P26358 1616 aaKnown RBP7.46□□□□□ -1.21
TCF4-218ENST00000563686 PDE3BQ13370 1112 aa7.46□□□□□ -1.22
TCF4-218ENST00000563686 MAGI1Q96QZ7 1491 aaPredicted RBP7.46□□□□□ -1.22
TCF4-218ENST00000563686 TCERG1O14776 1098 aaKnown RBP7.45□□□□□ -1.22
TCF4-218ENST00000563686 PTPRKQ15262 1439 aa7.44□□□□□ -1.22
TCF4-218ENST00000563686 SMG6Q86US8 1419 aaKnown RBP7.44□□□□□ -1.22
TCF4-218ENST00000563686 PLEKHH2Q8IVE3 1493 aa7.44□□□□□ -1.22
TCF4-218ENST00000563686 RRP1P56182 461 aaKnown RBP7.43□□□□□ -1.22
TCF4-218ENST00000563686 NLRP13Q86W25 1043 aa7.43□□□□□ -1.22
TCF4-218ENST00000563686 BRD4O60885 1362 aaPredicted RBP7.43□□□□□ -1.22
TCF4-218ENST00000563686 EFCAB2Q5VUJ9 269 aa7.43□□□□□ -1.22
TCF4-218ENST00000563686 NCOA1Q15788 1441 aa7.43□□□□□ -1.22
TCF4-218ENST00000563686 ST20-MTHFSA0A0A6YYL1 179 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms