RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 PTPRGP23470 1445 aa16.18■□□□□ 0.18
CLPX-204ENST00000559152 GPATCH8Q9UKJ3 1502 aaKnown RBP16.17■□□□□ 0.18
CLPX-204ENST00000559152 ATP10BO94823 1461 aa16.16■□□□□ 0.18
CLPX-204ENST00000559152 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
CLPX-204ENST00000559152 CAMSAP2Q08AD1 1489 aa16.14■□□□□ 0.17
CLPX-204ENST00000559152 KIF14Q15058 1648 aa16.14■□□□□ 0.17
CLPX-204ENST00000559152 ZNF644Q9H582 1327 aaPredicted RBP16.12■□□□□ 0.17
CLPX-204ENST00000559152 SHROOM2Q13796 1616 aa16.11■□□□□ 0.17
CLPX-204ENST00000559152 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
CLPX-204ENST00000559152 ABCC10Q5T3U5 1492 aa16.09■□□□□ 0.17
CLPX-204ENST00000559152 ADGRL2O95490 1459 aa16.09■□□□□ 0.17
CLPX-204ENST00000559152 KDM6BO15054 1643 aa16.08■□□□□ 0.17
CLPX-204ENST00000559152 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.16
CLPX-204ENST00000559152 NCOA1Q15788 1441 aa16.07■□□□□ 0.16
CLPX-204ENST00000559152 ANKRD30AQ9BXX3 1397 aa16.07■□□□□ 0.16
CLPX-204ENST00000559152 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
CLPX-204ENST00000559152 ADGBQ8N7X0 1667 aa16.06■□□□□ 0.16
CLPX-204ENST00000559152 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
CLPX-204ENST00000559152 SHANK2Q9UPX8 1470 aa16.05■□□□□ 0.16
CLPX-204ENST00000559152 CROCC2H7BZ55 1655 aa16.04■□□□□ 0.16
CLPX-204ENST00000559152 CDC42BPAQ5VT25 1732 aa16.03■□□□□ 0.16
CLPX-204ENST00000559152 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
CLPX-204ENST00000559152 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.16
CLPX-204ENST00000559152 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
CLPX-204ENST00000559152 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
CLPX-204ENST00000559152 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
CLPX-204ENST00000559152 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
CLPX-204ENST00000559152 ABCC2Q92887 1545 aa16■□□□□ 0.15
CLPX-204ENST00000559152 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
CLPX-204ENST00000559152 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
CLPX-204ENST00000559152 ARHGEF5Q12774 1597 aa15.99■□□□□ 0.15
CLPX-204ENST00000559152 C9orf84Q5VXU9 1444 aa15.98■□□□□ 0.15
CLPX-204ENST00000559152 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
CLPX-204ENST00000559152 ANKRD50Q9ULJ7 1429 aa15.98■□□□□ 0.15
CLPX-204ENST00000559152 RPRD2Q5VT52 1461 aaKnown RBP15.97■□□□□ 0.15
CLPX-204ENST00000559152 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
CLPX-204ENST00000559152 DDX10Q13206 875 aaKnown RBP15.95■□□□□ 0.14
CLPX-204ENST00000559152 PREX2Q70Z35 1606 aa15.95■□□□□ 0.14
CLPX-204ENST00000559152 UHRF1BP1LA0JNW5 1464 aa15.95■□□□□ 0.14
CLPX-204ENST00000559152 PZPP20742 1482 aa15.94■□□□□ 0.14
CLPX-204ENST00000559152 CCDC141Q6ZP82 1450 aa15.93■□□□□ 0.14
CLPX-204ENST00000559152 MBD5Q9P267 1494 aa15.93■□□□□ 0.14
CLPX-204ENST00000559152 L3MBTL2Q969R5 705 aa15.93■□□□□ 0.14
CLPX-204ENST00000559152 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
CLPX-204ENST00000559152 KIAA1107Q9UPP5 1409 aa15.93■□□□□ 0.14
CLPX-204ENST00000559152 PLEKHH2Q8IVE3 1493 aa15.92■□□□□ 0.14
CLPX-204ENST00000559152 FOXD1Q16676 465 aa15.92■□□□□ 0.14
CLPX-204ENST00000559152 HNRNPMP52272 730 aaKnown RBP eCLIP15.91■□□□□ 0.14
CLPX-204ENST00000559152 SAMD9LQ8IVG5 1584 aa15.9■□□□□ 0.14
CLPX-204ENST00000559152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLPX-204ENST00000559152 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.143e-6■■■■■ 37.9
CLPX-204ENST00000559152 CDC42BPBQ9Y5S2 1711 aa15.9■□□□□ 0.14
CLPX-204ENST00000559152 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
CLPX-204ENST00000559152 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
CLPX-204ENST00000559152 KDM5DQ9BY66 1539 aa15.89■□□□□ 0.13
CLPX-204ENST00000559152 TEX14Q8IWB6 1497 aa15.88■□□□□ 0.13
CLPX-204ENST00000559152 HIRIP3Q9BW71 556 aaPredicted RBP15.88■□□□□ 0.13
CLPX-204ENST00000559152 ANP32CO43423 234 aa15.87■□□□□ 0.13
CLPX-204ENST00000559152 NUP155O75694 1391 aa15.87■□□□□ 0.13
CLPX-204ENST00000559152 PKD2Q13563 968 aa15.87■□□□□ 0.13
CLPX-204ENST00000559152 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
CLPX-204ENST00000559152 TTC37Q6PGP7 1564 aa15.86■□□□□ 0.13
CLPX-204ENST00000559152 MAST1Q9Y2H9 1570 aa15.86■□□□□ 0.13
CLPX-204ENST00000559152 CCER2I3L3R5 266 aa15.86■□□□□ 0.13
CLPX-204ENST00000559152 MYO5CQ9NQX4 1742 aa15.85■□□□□ 0.13
CLPX-204ENST00000559152 HSPA5P11021 654 aaKnown RBP15.84■□□□□ 0.13
CLPX-204ENST00000559152 ZCCHC11Q5TAX3 1644 aaKnown RBP15.84■□□□□ 0.13
CLPX-204ENST00000559152 PLCH2O75038 1416 aa15.84■□□□□ 0.13
CLPX-204ENST00000559152 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
CLPX-204ENST00000559152 EFCAB2Q5VUJ9 269 aa15.82■□□□□ 0.12
CLPX-204ENST00000559152 KCNH8Q96L42 1107 aa15.82■□□□□ 0.12
CLPX-204ENST00000559152 PLXNC1O60486 1568 aa15.79■□□□□ 0.12
CLPX-204ENST00000559152 ARAP3Q8WWN8 1544 aa15.79■□□□□ 0.12
CLPX-204ENST00000559152 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
CLPX-204ENST00000559152 WASHC2AQ641Q2 1341 aa15.76■□□□□ 0.11
CLPX-204ENST00000559152 ARHGEF12Q9NZN5 1544 aa15.76■□□□□ 0.11
CLPX-204ENST00000559152 DUOX2Q9NRD8 1548 aa15.75■□□□□ 0.11
CLPX-204ENST00000559152 FAM135AQ9P2D6 1515 aa15.75■□□□□ 0.11
CLPX-204ENST00000559152 RIMBP3CA6NJZ7 1639 aa15.74■□□□□ 0.11
CLPX-204ENST00000559152 RIMBP3BA6NNM3 1639 aa15.74■□□□□ 0.11
CLPX-204ENST00000559152 RIMBP3Q9UFD9 1639 aa15.74■□□□□ 0.11
CLPX-204ENST00000559152 UHRF1BP1Q6BDS2 1440 aa15.74■□□□□ 0.11
CLPX-204ENST00000559152 SPATA31E1Q6ZUB1 1445 aa15.74■□□□□ 0.11
CLPX-204ENST00000559152 ERBINQ96RT1 1412 aa15.74■□□□□ 0.11
CLPX-204ENST00000559152 UNC13BO14795 1591 aa15.74■□□□□ 0.11
CLPX-204ENST00000559152 ABCC1P33527 1531 aa15.73■□□□□ 0.11
CLPX-204ENST00000559152 WDR7Q9Y4E6 1490 aa15.73■□□□□ 0.11
CLPX-204ENST00000559152 CCDC7Q96M83 1385 aa15.72■□□□□ 0.11
CLPX-204ENST00000559152 RTEL1-TNFRSF6BF6WH68 1400 aa15.7■□□□□ 0.1
CLPX-204ENST00000559152 CNTLNQ9NXG0 1405 aa15.7■□□□□ 0.1
CLPX-204ENST00000559152 ARID4BQ4LE39 1312 aaPredicted RBP15.68■□□□□ 0.1
CLPX-204ENST00000559152 CCDC144AA2RUR9 1427 aa15.68■□□□□ 0.1
CLPX-204ENST00000559152 IQGAP3Q86VI3 1631 aa15.68■□□□□ 0.1
CLPX-204ENST00000559152 RALGAPBQ86X10 1494 aa15.68■□□□□ 0.1
CLPX-204ENST00000559152 MAGI2Q86UL8 1455 aa15.67■□□□□ 0.1
CLPX-204ENST00000559152 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
CLPX-204ENST00000559152 SPAG9O60271 1321 aaKnown RBP15.67■□□□□ 0.1
CLPX-204ENST00000559152 USP47Q96K76 1375 aa15.66■□□□□ 0.1
CLPX-204ENST00000559152 TRAPPC8Q9Y2L5 1435 aa15.66■□□□□ 0.1
CLPX-204ENST00000559152 ABCA9Q8IUA7 1624 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms