RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
SEC11A-206ENST00000558924 UACAQ9BZF9 1416 aa16.52■□□□□ 0.24
SEC11A-206ENST00000558924 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.24
SEC11A-206ENST00000558924 C11orf95C9JLR9 678 aaPredicted RBP16.51■□□□□ 0.23
SEC11A-206ENST00000558924 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
SEC11A-206ENST00000558924 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
SEC11A-206ENST00000558924 DCAF11Q8TEB1 546 aa16.48■□□□□ 0.23
SEC11A-206ENST00000558924 HFM1A2PYH4 1435 aa16.48■□□□□ 0.23
SEC11A-206ENST00000558924 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
SEC11A-206ENST00000558924 RTL5Q5HYW3 569 aaPredicted RBP16.47■□□□□ 0.23
SEC11A-206ENST00000558924 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
SEC11A-206ENST00000558924 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
SEC11A-206ENST00000558924 CARD11Q9BXL7 1154 aa16.46■□□□□ 0.23
SEC11A-206ENST00000558924 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
SEC11A-206ENST00000558924 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
SEC11A-206ENST00000558924 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
SEC11A-206ENST00000558924 EPRSP07814 1512 aaKnown RBP16.44■□□□□ 0.22
SEC11A-206ENST00000558924 CUL7Q14999 1698 aa16.44■□□□□ 0.22
SEC11A-206ENST00000558924 NUP155O75694 1391 aa16.42■□□□□ 0.22
SEC11A-206ENST00000558924 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
SEC11A-206ENST00000558924 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
SEC11A-206ENST00000558924 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
SEC11A-206ENST00000558924 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.22
SEC11A-206ENST00000558924 CTTNBP2Q8WZ74 1663 aa16.39■□□□□ 0.21
SEC11A-206ENST00000558924 PLB1Q6P1J6 1458 aa16.39■□□□□ 0.21
SEC11A-206ENST00000558924 MAGI3Q5TCQ9 1506 aa16.39■□□□□ 0.21
SEC11A-206ENST00000558924 PTPN23Q9H3S7 1636 aa16.38■□□□□ 0.21
SEC11A-206ENST00000558924 PPP4R2Q9NY27 417 aa16.38■□□□□ 0.21
SEC11A-206ENST00000558924 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
SEC11A-206ENST00000558924 CFAP43Q8NDM7 1665 aa16.38■□□□□ 0.21
SEC11A-206ENST00000558924 LAS1LQ9Y4W2 734 aaKnown RBP16.38■□□□□ 0.21
SEC11A-206ENST00000558924 SUPT6HQ7KZ85 1726 aaKnown RBP16.37■□□□□ 0.21
SEC11A-206ENST00000558924 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
SEC11A-206ENST00000558924 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
SEC11A-206ENST00000558924 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
SEC11A-206ENST00000558924 EHBP1L1Q8N3D4 1523 aa16.36■□□□□ 0.21
SEC11A-206ENST00000558924 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
SEC11A-206ENST00000558924 KIF7Q2M1P5 1343 aa16.35■□□□□ 0.21
SEC11A-206ENST00000558924 ST20-MTHFSA0A0A6YYL1 179 aa16.34■□□□□ 0.21
SEC11A-206ENST00000558924 CC2D1BQ5T0F9 858 aaKnown RBP16.32■□□□□ 0.2
SEC11A-206ENST00000558924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEC11A-206ENST00000558924 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
SEC11A-206ENST00000558924 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
SEC11A-206ENST00000558924 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
SEC11A-206ENST00000558924 DAPK1P53355 1430 aa16.3■□□□□ 0.2
SEC11A-206ENST00000558924 ABCC5O15440 1437 aa16.29■□□□□ 0.2
SEC11A-206ENST00000558924 CCDC7Q96M83 1385 aa16.29■□□□□ 0.2
SEC11A-206ENST00000558924 ANKRD30AQ9BXX3 1397 aa16.29■□□□□ 0.2
SEC11A-206ENST00000558924 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
SEC11A-206ENST00000558924 KDM6BO15054 1643 aa16.28■□□□□ 0.2
SEC11A-206ENST00000558924 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
SEC11A-206ENST00000558924 UGGT2Q9NYU1 1516 aa16.27■□□□□ 0.2
SEC11A-206ENST00000558924 USP47Q96K76 1375 aa16.25■□□□□ 0.19
SEC11A-206ENST00000558924 IFT140Q96RY7 1462 aa16.25■□□□□ 0.19
SEC11A-206ENST00000558924 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
SEC11A-206ENST00000558924 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
SEC11A-206ENST00000558924 PTPRGP23470 1445 aa16.23■□□□□ 0.19
SEC11A-206ENST00000558924 ANKRD30BQ9BXX2 1392 aa16.23■□□□□ 0.19
SEC11A-206ENST00000558924 DAXXQ9UER7 740 aaPredicted RBP16.23■□□□□ 0.19
SEC11A-206ENST00000558924 NUP153P49790 1475 aaKnown RBP16.23■□□□□ 0.19
SEC11A-206ENST00000558924 NBPF1Q3BBV0 1214 aa16.23■□□□□ 0.19
SEC11A-206ENST00000558924 ANKRD50Q9ULJ7 1429 aa16.22■□□□□ 0.19
SEC11A-206ENST00000558924 SAMD9Q5K651 1589 aa16.22■□□□□ 0.19
SEC11A-206ENST00000558924 UBE2Q2Q8WVN8 375 aa16.21■□□□□ 0.19
SEC11A-206ENST00000558924 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
SEC11A-206ENST00000558924 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
SEC11A-206ENST00000558924 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
SEC11A-206ENST00000558924 ARXQ96QS3 562 aa16.2■□□□□ 0.18
SEC11A-206ENST00000558924 TROQ12816 1431 aaPredicted RBP16.2■□□□□ 0.18
SEC11A-206ENST00000558924 SKAP1Q86WV1 359 aa16.2■□□□□ 0.18
SEC11A-206ENST00000558924 ROCK2O75116 1388 aaKnown RBP16.2■□□□□ 0.18
SEC11A-206ENST00000558924 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
SEC11A-206ENST00000558924 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
SEC11A-206ENST00000558924 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
SEC11A-206ENST00000558924 KIF15Q9NS87 1388 aa16.19■□□□□ 0.18
SEC11A-206ENST00000558924 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
SEC11A-206ENST00000558924 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
SEC11A-206ENST00000558924 DISP1Q96F81 1524 aa16.16■□□□□ 0.18
SEC11A-206ENST00000558924 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
SEC11A-206ENST00000558924 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
SEC11A-206ENST00000558924 NCOA1Q15788 1441 aa16.15■□□□□ 0.18
SEC11A-206ENST00000558924 WDR62O43379 1518 aa16.15■□□□□ 0.18
SEC11A-206ENST00000558924 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
SEC11A-206ENST00000558924 AKNAQ7Z591 1439 aa16.15■□□□□ 0.18
SEC11A-206ENST00000558924 PLIN1O60240 522 aa16.14■□□□□ 0.17
SEC11A-206ENST00000558924 NEFMP07197 916 aa16.14■□□□□ 0.17
SEC11A-206ENST00000558924 AFAP1Q8N556 730 aa16.14■□□□□ 0.17
SEC11A-206ENST00000558924 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
SEC11A-206ENST00000558924 IPO9Q96P70 1041 aaKnown RBP16.13■□□□□ 0.17
SEC11A-206ENST00000558924 GPATCH8Q9UKJ3 1502 aaKnown RBP16.12■□□□□ 0.17
SEC11A-206ENST00000558924 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
SEC11A-206ENST00000558924 NUTM2DQ5VT03 806 aaPredicted RBP16.11■□□□□ 0.17
SEC11A-206ENST00000558924 DENND4BO75064 1496 aaPredicted RBP16.11■□□□□ 0.17
SEC11A-206ENST00000558924 KIAA1107Q9UPP5 1409 aa16.09■□□□□ 0.17
SEC11A-206ENST00000558924 RPRD2Q5VT52 1461 aaKnown RBP16.09■□□□□ 0.17
SEC11A-206ENST00000558924 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
SEC11A-206ENST00000558924 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
SEC11A-206ENST00000558924 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.17
SEC11A-206ENST00000558924 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
SEC11A-206ENST00000558924 KIF3BO15066 747 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms