RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 SEC24BO95487 1268 aa14.02□□□□□ -0.17
SHC4-204ENST00000557797 ILDR1Q86SU0 546 aaPredicted RBP14.02□□□□□ -0.17
SHC4-204ENST00000557797 POTEJP0CG39 1038 aa14□□□□□ -0.17
SHC4-204ENST00000557797 PDCD7Q8N8D1 485 aaKnown RBP14□□□□□ -0.17
SHC4-204ENST00000557797 CYB5RLQ6IPT4 315 aa13.99□□□□□ -0.17
SHC4-204ENST00000557797 OCEL1Q9H607 264 aa13.99□□□□□ -0.17
SHC4-204ENST00000557797 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
SHC4-204ENST00000557797 PLCG2P16885 1265 aa13.98□□□□□ -0.17
SHC4-204ENST00000557797 HS6ST3Q8IZP7 471 aa13.98□□□□□ -0.17
SHC4-204ENST00000557797 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHC4-204ENST00000557797 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
SHC4-204ENST00000557797 CHGAP10645 457 aaKnown RBP13.95□□□□□ -0.18
SHC4-204ENST00000557797 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
SHC4-204ENST00000557797 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
SHC4-204ENST00000557797 SOX12O15370 315 aa13.92□□□□□ -0.18
SHC4-204ENST00000557797 PHF8Q9UPP1 1060 aa13.91□□□□□ -0.18
SHC4-204ENST00000557797 DPY19L2Q6NUT2 758 aa13.9□□□□□ -0.18
SHC4-204ENST00000557797 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
SHC4-204ENST00000557797 MFRPQ9BY79 579 aa13.89□□□□□ -0.19
SHC4-204ENST00000557797 CFTRP13569 1480 aa13.87□□□□□ -0.19
SHC4-204ENST00000557797 FBXO22Q8NEZ5 403 aa13.87□□□□□ -0.19
SHC4-204ENST00000557797 OTUD5Q96G74 571 aa13.87□□□□□ -0.19
SHC4-204ENST00000557797 ZNF608Q9ULD9 1512 aaPredicted RBP13.85□□□□□ -0.19
SHC4-204ENST00000557797 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
SHC4-204ENST00000557797 NKX1-1Q15270 411 aaPredicted RBP13.84□□□□□ -0.19
SHC4-204ENST00000557797 IFT140Q96RY7 1462 aa13.83□□□□□ -0.2
SHC4-204ENST00000557797 NLRP6P59044 892 aa13.82□□□□□ -0.2
SHC4-204ENST00000557797 CHD1O14646 1710 aa13.8□□□□□ -0.2
SHC4-204ENST00000557797 MAMSTRQ6ZN01 415 aa13.78□□□□□ -0.2
SHC4-204ENST00000557797 EIF4G3O43432 1585 aaKnown RBP13.77□□□□□ -0.21
SHC4-204ENST00000557797 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
SHC4-204ENST00000557797 SCUBE2Q9NQ36 999 aa13.75□□□□□ -0.21
SHC4-204ENST00000557797 WIZO95785 1651 aa13.75□□□□□ -0.21
SHC4-204ENST00000557797 BOLA1Q9Y3E2 137 aa13.74□□□□□ -0.21
SHC4-204ENST00000557797 TMEM121BQ9BXQ6 578 aaPredicted RBP13.73□□□□□ -0.21
SHC4-204ENST00000557797 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
SHC4-204ENST00000557797 PPP1R37O75864 691 aa13.7□□□□□ -0.22
SHC4-204ENST00000557797 MICALL2Q8IY33 904 aa13.69□□□□□ -0.22
SHC4-204ENST00000557797 TOPBP1Q92547 1522 aa13.66□□□□□ -0.22
SHC4-204ENST00000557797 GTPBP6O43824 516 aaPredicted RBP13.66□□□□□ -0.22
SHC4-204ENST00000557797 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
SHC4-204ENST00000557797 CLASP1Q7Z460 1538 aa13.65□□□□□ -0.22
SHC4-204ENST00000557797 C3orf67Q6ZVT6 689 aa13.65□□□□□ -0.22
SHC4-204ENST00000557797 G3V3G9 751 aa13.64□□□□□ -0.23
SHC4-204ENST00000557797 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
SHC4-204ENST00000557797 SLAIN1Q8ND83 568 aa13.63□□□□□ -0.23
SHC4-204ENST00000557797 TARBP1Q13395 1621 aaKnown RBP13.63□□□□□ -0.23
SHC4-204ENST00000557797 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
SHC4-204ENST00000557797 ABCC8Q09428 1581 aa13.61□□□□□ -0.23
SHC4-204ENST00000557797 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
SHC4-204ENST00000557797 TMEM92Q6UXU6 159 aa13.59□□□□□ -0.23
SHC4-204ENST00000557797 RYDENQ9NUL5 291 aaKnown RBP13.59□□□□□ -0.23
SHC4-204ENST00000557797 TOP2AP11388 1531 aaKnown RBP13.56□□□□□ -0.24
SHC4-204ENST00000557797 DNMBPQ6XZF7 1577 aa13.56□□□□□ -0.24
SHC4-204ENST00000557797 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
SHC4-204ENST00000557797 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
SHC4-204ENST00000557797 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.48□□□□□ -0.25
SHC4-204ENST00000557797 WDR97A6NE52 1622 aa13.48□□□□□ -0.25
SHC4-204ENST00000557797 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
SHC4-204ENST00000557797 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
SHC4-204ENST00000557797 KIF3CO14782 793 aa13.47□□□□□ -0.25
SHC4-204ENST00000557797 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
SHC4-204ENST00000557797 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.26
SHC4-204ENST00000557797 SPRYD3Q8NCJ5 442 aa13.45□□□□□ -0.26
SHC4-204ENST00000557797 C2orf72A6NCS6 295 aa13.43□□□□□ -0.26
SHC4-204ENST00000557797 LCE2DQ5TA82 110 aaPredicted RBP13.43□□□□□ -0.26
SHC4-204ENST00000557797 PAXIP1Q6ZW49 1069 aaPredicted RBP13.43□□□□□ -0.26
SHC4-204ENST00000557797 CHMP7Q8WUX9 453 aaPredicted RBP13.42□□□□□ -0.26
SHC4-204ENST00000557797 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
SHC4-204ENST00000557797 SYNJ2O15056 1496 aa13.41□□□□□ -0.26
SHC4-204ENST00000557797 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
SHC4-204ENST00000557797 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
SHC4-204ENST00000557797 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
SHC4-204ENST00000557797 RAD54L2Q9Y4B4 1467 aa13.39□□□□□ -0.27
SHC4-204ENST00000557797 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
SHC4-204ENST00000557797 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
SHC4-204ENST00000557797 SOGA1O94964 1423 aa13.37□□□□□ -0.27
SHC4-204ENST00000557797 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
SHC4-204ENST00000557797 SNPHO15079 494 aa13.36□□□□□ -0.27
SHC4-204ENST00000557797 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
SHC4-204ENST00000557797 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
SHC4-204ENST00000557797 CRISPLD2Q9H0B8 497 aa13.36□□□□□ -0.27
SHC4-204ENST00000557797 NCKAP5LQ9HCH0 1330 aa13.36□□□□□ -0.27
SHC4-204ENST00000557797 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
SHC4-204ENST00000557797 ERCC6L2Q5T890 1561 aa13.33□□□□□ -0.28
SHC4-204ENST00000557797 ST18O60284 1047 aa13.33□□□□□ -0.28
SHC4-204ENST00000557797 FOXK1P85037 733 aa13.3□□□□□ -0.28
SHC4-204ENST00000557797 DSG2Q14126 1118 aa13.29□□□□□ -0.28
SHC4-204ENST00000557797 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
SHC4-204ENST00000557797 DOK7Q18PE1 504 aa13.27□□□□□ -0.29
SHC4-204ENST00000557797 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.29
SHC4-204ENST00000557797 CEP170Q5SW79 1584 aa13.26□□□□□ -0.29
SHC4-204ENST00000557797 ABCC10Q5T3U5 1492 aa13.26□□□□□ -0.29
SHC4-204ENST00000557797 KDM6BO15054 1643 aa13.25□□□□□ -0.29
SHC4-204ENST00000557797 PDE4AP27815 886 aa13.25□□□□□ -0.29
SHC4-204ENST00000557797 PLPP6Q8IY26 295 aa13.25□□□□□ -0.29
SHC4-204ENST00000557797 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
SHC4-204ENST00000557797 MFSD10Q14728 455 aa13.23□□□□□ -0.29
SHC4-204ENST00000557797 PLCB2Q00722 1185 aa13.22□□□□□ -0.29
SHC4-204ENST00000557797 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms