RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 AEBP2Q6ZN18 517 aaPredicted RBP29.37■■■□□ 2.29
SHC4-204ENST00000557797 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
SHC4-204ENST00000557797 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
SHC4-204ENST00000557797 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
SHC4-204ENST00000557797 FOXD1Q16676 465 aa23.15■■□□□ 1.3
SHC4-204ENST00000557797 PLPPR3Q6T4P5 718 aa22.95■■□□□ 1.26
SHC4-204ENST00000557797 PPP6R1Q9UPN7 881 aa22.15■■□□□ 1.14
SHC4-204ENST00000557797 ADRA2BP18089 450 aa22.08■■□□□ 1.13
SHC4-204ENST00000557797 PIAS4Q8N2W9 510 aaPredicted RBP21.73■■□□□ 1.07
SHC4-204ENST00000557797 MSH5O43196 834 aa21.36■■□□□ 1.01
SHC4-204ENST00000557797 PPP4R3CPQ6ZMV5 832 aa20.21■□□□□ 0.83
SHC4-204ENST00000557797 MAPK8IP2Q13387 824 aaPredicted RBP20.11■□□□□ 0.81
SHC4-204ENST00000557797 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
SHC4-204ENST00000557797 POTEDQ86YR6 584 aa19.86■□□□□ 0.77
SHC4-204ENST00000557797 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
SHC4-204ENST00000557797 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
SHC4-204ENST00000557797 KCNA4P22459 653 aa19.56■□□□□ 0.72
SHC4-204ENST00000557797 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
SHC4-204ENST00000557797 NPM3O75607 178 aaKnown RBP19.37■□□□□ 0.69
SHC4-204ENST00000557797 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
SHC4-204ENST00000557797 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
SHC4-204ENST00000557797 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
SHC4-204ENST00000557797 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
SHC4-204ENST00000557797 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
SHC4-204ENST00000557797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
SHC4-204ENST00000557797 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
SHC4-204ENST00000557797 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
SHC4-204ENST00000557797 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
SHC4-204ENST00000557797 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
SHC4-204ENST00000557797 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
SHC4-204ENST00000557797 ZBTB22O15209 634 aa18.04■□□□□ 0.48
SHC4-204ENST00000557797 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
SHC4-204ENST00000557797 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
SHC4-204ENST00000557797 MYCNP04198 464 aaPredicted RBP17.85■□□□□ 0.45
SHC4-204ENST00000557797 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
SHC4-204ENST00000557797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
SHC4-204ENST00000557797 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
SHC4-204ENST00000557797 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
SHC4-204ENST00000557797 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
SHC4-204ENST00000557797 SAMD1Q6SPF0 538 aaPredicted RBP17.68■□□□□ 0.42
SHC4-204ENST00000557797 CAPN15O75808 1086 aa17.56■□□□□ 0.4
SHC4-204ENST00000557797 APLP2Q06481 763 aa17.56■□□□□ 0.4
SHC4-204ENST00000557797 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
SHC4-204ENST00000557797 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
SHC4-204ENST00000557797 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
SHC4-204ENST00000557797 ATXN8OSP0DMR3 200 aa17.39■□□□□ 0.37
SHC4-204ENST00000557797 DSG3P32926 999 aa17.38■□□□□ 0.37
SHC4-204ENST00000557797 ABCB7O75027 752 aa17.25■□□□□ 0.35
SHC4-204ENST00000557797 ABCC9O60706 1549 aa17.21■□□□□ 0.35
SHC4-204ENST00000557797 POLA2Q14181 598 aa17.13■□□□□ 0.33
SHC4-204ENST00000557797 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
SHC4-204ENST00000557797 MKRN4PQ13434 485 aaPredicted RBP16.7■□□□□ 0.26
SHC4-204ENST00000557797 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
SHC4-204ENST00000557797 FBLN2P98095 1184 aa16.62■□□□□ 0.25
SHC4-204ENST00000557797 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
SHC4-204ENST00000557797 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
SHC4-204ENST00000557797 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
SHC4-204ENST00000557797 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
SHC4-204ENST00000557797 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
SHC4-204ENST00000557797 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
SHC4-204ENST00000557797 SSUH2Q9Y2M2 353 aa16.25■□□□□ 0.19
SHC4-204ENST00000557797 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
SHC4-204ENST00000557797 SPDYE4A6NLX3 237 aa16.16■□□□□ 0.18
SHC4-204ENST00000557797 RB1CC1Q8TDY2 1594 aa16.15■□□□□ 0.18
SHC4-204ENST00000557797 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
SHC4-204ENST00000557797 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
SHC4-204ENST00000557797 FKBP8Q14318 412 aa15.99■□□□□ 0.15
SHC4-204ENST00000557797 PITPNM1O00562 1244 aa15.97■□□□□ 0.15
SHC4-204ENST00000557797 DNAJC5Q9H3Z4 198 aa15.94■□□□□ 0.14
SHC4-204ENST00000557797 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
SHC4-204ENST00000557797 PROM2Q8N271 834 aa15.93■□□□□ 0.14
SHC4-204ENST00000557797 NACADO15069 1562 aa15.89■□□□□ 0.13
SHC4-204ENST00000557797 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
SHC4-204ENST00000557797 CLEC11AQ9Y240 323 aa15.83■□□□□ 0.12
SHC4-204ENST00000557797 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
SHC4-204ENST00000557797 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
SHC4-204ENST00000557797 FXR2P51116 673 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHC4-204ENST00000557797 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
SHC4-204ENST00000557797 STAG3Q9UJ98 1225 aa15.68■□□□□ 0.1
SHC4-204ENST00000557797 POTEHQ6S545 545 aa15.67■□□□□ 0.1
SHC4-204ENST00000557797 PRR29P0C7W0 189 aa15.66■□□□□ 0.1
SHC4-204ENST00000557797 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
SHC4-204ENST00000557797 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
SHC4-204ENST00000557797 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
SHC4-204ENST00000557797 CHADLQ6NUI6 762 aa15.53■□□□□ 0.08
SHC4-204ENST00000557797 MYO15BQ96JP2 1530 aa15.5■□□□□ 0.07
SHC4-204ENST00000557797 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
SHC4-204ENST00000557797 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
SHC4-204ENST00000557797 DCAF8L2P0C7V8 631 aa15.44■□□□□ 0.06
SHC4-204ENST00000557797 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
SHC4-204ENST00000557797 EIF4G1Q04637 1599 aaKnown RBP15.37■□□□□ 0.05
SHC4-204ENST00000557797 FARP1Q9Y4F1 1045 aaPredicted RBP15.34■□□□□ 0.05
SHC4-204ENST00000557797 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.04
SHC4-204ENST00000557797 MIER1Q8N108 512 aa15.3■□□□□ 0.04
SHC4-204ENST00000557797 VASPP50552 380 aaPredicted RBP15.27■□□□□ 0.04
SHC4-204ENST00000557797 PLCD3Q8N3E9 789 aa15.25■□□□□ 0.03
SHC4-204ENST00000557797 HAX1O00165 279 aa15.2■□□□□ 0.02
SHC4-204ENST00000557797 CUX2O14529 1486 aa15.2■□□□□ 0.02
SHC4-204ENST00000557797 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
SHC4-204ENST00000557797 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms