RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 FAM50AQ14320 339 aaKnown RBP11.77□□□□□ -0.53
MARK3-210ENST00000556463 ABCA10Q8WWZ4 1543 aa11.77□□□□□ -0.53
MARK3-210ENST00000556463 PPP4R2Q9NY27 417 aa11.77□□□□□ -0.53
MARK3-210ENST00000556463 FHOD3Q2V2M9 1422 aa11.76□□□□□ -0.53
MARK3-210ENST00000556463 AKNAQ7Z591 1439 aa11.76□□□□□ -0.53
MARK3-210ENST00000556463 A0A0U1RQG5 324 aaPredicted RBP11.76□□□□□ -0.53
MARK3-210ENST00000556463 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
MARK3-210ENST00000556463 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
MARK3-210ENST00000556463 NCOA1Q15788 1441 aa11.75□□□□□ -0.53
MARK3-210ENST00000556463 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
MARK3-210ENST00000556463 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
MARK3-210ENST00000556463 FMN1Q68DA7 1419 aa11.74□□□□□ -0.53
MARK3-210ENST00000556463 MYOM3Q5VTT5 1437 aa11.73□□□□□ -0.53
MARK3-210ENST00000556463 UGGT2Q9NYU1 1516 aa11.73□□□□□ -0.53
MARK3-210ENST00000556463 NPM2Q86SE8 214 aaKnown RBP11.73□□□□□ -0.53
MARK3-210ENST00000556463 HNRNPUQ00839 825 aaKnown RBP eCLIP11.72□□□□□ -0.53
MARK3-210ENST00000556463 SUPT6HQ7KZ85 1726 aaKnown RBP11.72□□□□□ -0.53
MARK3-210ENST00000556463 RNF123Q5XPI4 1314 aa11.71□□□□□ -0.53
MARK3-210ENST00000556463 ZBED9Q6R2W3 1325 aa11.71□□□□□ -0.53
MARK3-210ENST00000556463 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.54
MARK3-210ENST00000556463 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.54
MARK3-210ENST00000556463 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
MARK3-210ENST00000556463 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
MARK3-210ENST00000556463 CCDC184Q52MB2 194 aa11.69□□□□□ -0.54
MARK3-210ENST00000556463 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
MARK3-210ENST00000556463 KDM6BO15054 1643 aa11.68□□□□□ -0.54
MARK3-210ENST00000556463 HSPA5P11021 654 aaKnown RBP11.68□□□□□ -0.54
MARK3-210ENST00000556463 GLIPR1L2Q4G1C9 344 aa11.68□□□□□ -0.54
MARK3-210ENST00000556463 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
MARK3-210ENST00000556463 MAGI3Q5TCQ9 1506 aa11.67□□□□□ -0.54
MARK3-210ENST00000556463 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
MARK3-210ENST00000556463 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
MARK3-210ENST00000556463 CCDC7Q96M83 1385 aa11.66□□□□□ -0.54
MARK3-210ENST00000556463 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
MARK3-210ENST00000556463 SMG6Q86US8 1419 aaKnown RBP11.66□□□□□ -0.54
MARK3-210ENST00000556463 TEX14Q8IWB6 1497 aa11.65□□□□□ -0.54
MARK3-210ENST00000556463 C11orf95C9JLR9 678 aaPredicted RBP11.65□□□□□ -0.54
MARK3-210ENST00000556463 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
MARK3-210ENST00000556463 TOPBP1Q92547 1522 aa11.63□□□□□ -0.55
MARK3-210ENST00000556463 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
MARK3-210ENST00000556463 RPRD2Q5VT52 1461 aaKnown RBP11.62□□□□□ -0.55
MARK3-210ENST00000556463 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
MARK3-210ENST00000556463 RAD54L2Q9Y4B4 1467 aa11.62□□□□□ -0.55
MARK3-210ENST00000556463 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■□□□□ 9.8
MARK3-210ENST00000556463 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
MARK3-210ENST00000556463 PAK3O75914 559 aaPredicted RBP11.61□□□□□ -0.55
MARK3-210ENST00000556463 DNAJC5BQ9UF47 199 aa11.61□□□□□ -0.55
MARK3-210ENST00000556463 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
MARK3-210ENST00000556463 ANP32AP39687 249 aaKnown RBP11.61□□□□□ -0.55
MARK3-210ENST00000556463 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
MARK3-210ENST00000556463 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
MARK3-210ENST00000556463 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
MARK3-210ENST00000556463 ANKRD30BQ9BXX2 1392 aa11.6□□□□□ -0.55
MARK3-210ENST00000556463 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
MARK3-210ENST00000556463 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
MARK3-210ENST00000556463 MBD5Q9P267 1494 aa11.59□□□□□ -0.55
MARK3-210ENST00000556463 B4GALNT3Q6L9W6 998 aa11.59□□□□□ -0.55
MARK3-210ENST00000556463 NEFMP07197 916 aa11.58□□□□□ -0.56
MARK3-210ENST00000556463 BRPF3Q9ULD4 1205 aa11.57□□□□□ -0.56
MARK3-210ENST00000556463 ROCK1Q13464 1354 aa11.57□□□□□ -0.56
MARK3-210ENST00000556463 PKD2Q13563 968 aa11.56□□□□□ -0.56
MARK3-210ENST00000556463 L3MBTL2Q969R5 705 aa11.56□□□□□ -0.56
MARK3-210ENST00000556463 BCORL1Q5H9F3 1711 aa11.56□□□□□ -0.56
MARK3-210ENST00000556463 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
MARK3-210ENST00000556463 IPO9Q96P70 1041 aaKnown RBP11.55□□□□□ -0.56
MARK3-210ENST00000556463 NBPF8Q3BBV2 869 aa11.54□□□□□ -0.56
MARK3-210ENST00000556463 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
MARK3-210ENST00000556463 MPHOSPH9Q99550 1183 aa11.54□□□□□ -0.56
MARK3-210ENST00000556463 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
MARK3-210ENST00000556463 ZMYND15Q9H091 742 aa11.53□□□□□ -0.56
MARK3-210ENST00000556463 MRS2Q9HD23 443 aa11.53□□□□□ -0.56
MARK3-210ENST00000556463 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
MARK3-210ENST00000556463 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
MARK3-210ENST00000556463 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.56
MARK3-210ENST00000556463 NESP48681 1621 aa11.52□□□□□ -0.57
MARK3-210ENST00000556463 KDM5CP41229 1560 aa11.52□□□□□ -0.57
MARK3-210ENST00000556463 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
MARK3-210ENST00000556463 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
MARK3-210ENST00000556463 EPRSP07814 1512 aaKnown RBP11.51□□□□□ -0.57
MARK3-210ENST00000556463 LRPPRCP42704 1394 aaKnown RBP11.51□□□□□ -0.57
MARK3-210ENST00000556463 FAM9BQ8IZU0 186 aa11.5□□□□□ -0.57
MARK3-210ENST00000556463 KIF14Q15058 1648 aa11.5□□□□□ -0.57
MARK3-210ENST00000556463 E9PCH4 1651 aa11.5□□□□□ -0.57
MARK3-210ENST00000556463 WDR62O43379 1518 aa11.49□□□□□ -0.57
MARK3-210ENST00000556463 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
MARK3-210ENST00000556463 ATP1B4Q9UN42 357 aaPredicted RBP11.49□□□□□ -0.57
MARK3-210ENST00000556463 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
MARK3-210ENST00000556463 DAPK1P53355 1430 aa11.48□□□□□ -0.57
MARK3-210ENST00000556463 PZPP20742 1482 aa11.48□□□□□ -0.57
MARK3-210ENST00000556463 SENP3-EIF4A1A0A087X0R7 540 aa11.48□□□□□ -0.57
MARK3-210ENST00000556463 RRP7BPQ9NSQ0 103 aa11.48□□□□□ -0.57
MARK3-210ENST00000556463 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
MARK3-210ENST00000556463 UHRF1BP1Q6BDS2 1440 aa11.47□□□□□ -0.57
MARK3-210ENST00000556463 ABCC5O15440 1437 aa11.47□□□□□ -0.57
MARK3-210ENST00000556463 PNISRQ8TF01 805 aaKnown RBP11.46□□□□□ -0.57
MARK3-210ENST00000556463 NAP1L5Q96NT1 182 aaPredicted RBP11.46□□□□□ -0.58
MARK3-210ENST00000556463 GAPVD1Q14C86 1478 aa11.46□□□□□ -0.58
MARK3-210ENST00000556463 WASHC2CQ9Y4E1 1318 aa11.45□□□□□ -0.58
MARK3-210ENST00000556463 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
MARK3-210ENST00000556463 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms