RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 PBRM1Q86U86 1689 aa14.16□□□□□ -0.14
EFCAB11-208ENST00000555872 ZNF326Q5BKZ1 582 aaKnown RBP14.16□□□□□ -0.14
EFCAB11-208ENST00000555872 GAPVD1Q14C86 1478 aa14.16□□□□□ -0.14
EFCAB11-208ENST00000555872 TPRNQ4KMQ1 711 aa14.14□□□□□ -0.15
EFCAB11-208ENST00000555872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.14□□□□□ -0.15
EFCAB11-208ENST00000555872 CARMIL1Q5VZK9 1371 aa14.14□□□□□ -0.15
EFCAB11-208ENST00000555872 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
EFCAB11-208ENST00000555872 NOP58Q9Y2X3 529 aaKnown RBP14.11□□□□□ -0.15
EFCAB11-208ENST00000555872 HECW2Q9P2P5 1572 aa14.1□□□□□ -0.15
EFCAB11-208ENST00000555872 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
EFCAB11-208ENST00000555872 TDRD9Q8NDG6 1382 aaKnown RBP14.09□□□□□ -0.15
EFCAB11-208ENST00000555872 BBXQ8WY36 941 aaPredicted RBP14.07□□□□□ -0.16
EFCAB11-208ENST00000555872 ZFP91Q96JP5 570 aaPredicted RBP14.07□□□□□ -0.16
EFCAB11-208ENST00000555872 CTTNBP2Q8WZ74 1663 aa14.07□□□□□ -0.16
EFCAB11-208ENST00000555872 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
EFCAB11-208ENST00000555872 CLIP1P30622 1438 aa14.07□□□□□ -0.16
EFCAB11-208ENST00000555872 EIF4G3O43432 1585 aaKnown RBP14.06□□□□□ -0.16
EFCAB11-208ENST00000555872 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
EFCAB11-208ENST00000555872 CCER2I3L3R5 266 aa14.05□□□□□ -0.16
EFCAB11-208ENST00000555872 RTL5Q5HYW3 569 aaPredicted RBP14.05□□□□□ -0.16
EFCAB11-208ENST00000555872 VPS8Q8N3P4 1428 aa14.05□□□□□ -0.16
EFCAB11-208ENST00000555872 ANP32CO43423 234 aa14.04□□□□□ -0.16
EFCAB11-208ENST00000555872 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
EFCAB11-208ENST00000555872 SPATA31D1Q6ZQQ2 1576 aa14.03□□□□□ -0.16
EFCAB11-208ENST00000555872 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
EFCAB11-208ENST00000555872 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.16
EFCAB11-208ENST00000555872 ZNF608Q9ULD9 1512 aaPredicted RBP14.02□□□□□ -0.16
EFCAB11-208ENST00000555872 KDM6BO15054 1643 aa14.02□□□□□ -0.16
EFCAB11-208ENST00000555872 AQRO60306 1485 aaKnown RBP eCLIP14.02□□□□□ -0.16
EFCAB11-208ENST00000555872 KIF13AQ9H1H9 1805 aa14.02□□□□□ -0.17
EFCAB11-208ENST00000555872 GTF2E1P29083 439 aaPredicted RBP14.01□□□□□ -0.17
EFCAB11-208ENST00000555872 IPO4Q8TEX9 1081 aaKnown RBP14.01□□□□□ -0.17
EFCAB11-208ENST00000555872 CDK11BP21127 795 aaKnown RBP14.01□□□□□ -0.17
EFCAB11-208ENST00000555872 HIRIP3Q9BW71 556 aaPredicted RBP14□□□□□ -0.17
EFCAB11-208ENST00000555872 FBXO3Q9UK99 471 aa14□□□□□ -0.17
EFCAB11-208ENST00000555872 PPP4R2Q9NY27 417 aa13.99□□□□□ -0.17
EFCAB11-208ENST00000555872 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
EFCAB11-208ENST00000555872 CHD1O14646 1710 aa13.99□□□□□ -0.17
EFCAB11-208ENST00000555872 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
EFCAB11-208ENST00000555872 BCCIPQ9P287 314 aaKnown RBP eCLIP13.98□□□□□ -0.17
EFCAB11-208ENST00000555872 B4GALNT3Q6L9W6 998 aa13.97□□□□□ -0.17
EFCAB11-208ENST00000555872 SECISBP2LQ93073 1101 aaKnown RBP13.97□□□□□ -0.17
EFCAB11-208ENST00000555872 EFCAB5A4FU69 1503 aa13.95□□□□□ -0.18
EFCAB11-208ENST00000555872 SNAPC4Q5SXM2 1469 aa13.94□□□□□ -0.18
EFCAB11-208ENST00000555872 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
EFCAB11-208ENST00000555872 HSP90B1P14625 803 aaKnown RBP13.93□□□□□ -0.18
EFCAB11-208ENST00000555872 C11orf95C9JLR9 678 aaPredicted RBP13.93□□□□□ -0.18
EFCAB11-208ENST00000555872 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
EFCAB11-208ENST00000555872 STAC3Q96MF2 364 aa13.9□□□□□ -0.18
EFCAB11-208ENST00000555872 ZBTB47Q9UFB7 747 aaPredicted RBP13.9□□□□□ -0.18
EFCAB11-208ENST00000555872 PRDM4Q9UKN5 801 aa13.9□□□□□ -0.18
EFCAB11-208ENST00000555872 SAMD9Q5K651 1589 aa13.9□□□□□ -0.18
EFCAB11-208ENST00000555872 ANP32AP39687 249 aaKnown RBP13.9□□□□□ -0.18
EFCAB11-208ENST00000555872 IPO9Q96P70 1041 aaKnown RBP13.9□□□□□ -0.18
EFCAB11-208ENST00000555872 GRIN2AQ12879 1464 aa13.89□□□□□ -0.19
EFCAB11-208ENST00000555872 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
EFCAB11-208ENST00000555872 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
EFCAB11-208ENST00000555872 HSP90AA2PQ14568 343 aaPredicted RBP13.88□□□□□ -0.19
EFCAB11-208ENST00000555872 TEX2Q8IWB9 1127 aa13.88□□□□□ -0.19
EFCAB11-208ENST00000555872 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
EFCAB11-208ENST00000555872 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
EFCAB11-208ENST00000555872 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
EFCAB11-208ENST00000555872 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
EFCAB11-208ENST00000555872 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
EFCAB11-208ENST00000555872 CNPY4Q8N129 248 aa13.85□□□□□ -0.19
EFCAB11-208ENST00000555872 BRPF3Q9ULD4 1205 aa13.85□□□□□ -0.19
EFCAB11-208ENST00000555872 MAPKBP1O60336 1514 aa13.85□□□□□ -0.19
EFCAB11-208ENST00000555872 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
EFCAB11-208ENST00000555872 FTSJ3Q8IY81 847 aaKnown RBP13.84□□□□□ -0.19
EFCAB11-208ENST00000555872 KIAA0586Q9BVV6 1533 aa13.84□□□□□ -0.19
EFCAB11-208ENST00000555872 RGS3P49796 1198 aa13.84□□□□□ -0.19
EFCAB11-208ENST00000555872 RRP9O43818 475 aaKnown RBP13.84□□□□□ -0.19
EFCAB11-208ENST00000555872 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.2
EFCAB11-208ENST00000555872 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
EFCAB11-208ENST00000555872 WASHC2AQ641Q2 1341 aa13.83□□□□□ -0.2
EFCAB11-208ENST00000555872 IGSF3O75054 1194 aa13.82□□□□□ -0.2
EFCAB11-208ENST00000555872 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
EFCAB11-208ENST00000555872 KCNG1Q9UIX4 513 aa13.82□□□□□ -0.2
EFCAB11-208ENST00000555872 MAP3K1Q13233 1512 aa13.82□□□□□ -0.2
EFCAB11-208ENST00000555872 RRBP1Q9P2E9 1410 aaKnown RBP13.82□□□□□ -0.2
EFCAB11-208ENST00000555872 PRDM10Q9NQV6 1147 aa13.81□□□□□ -0.2
EFCAB11-208ENST00000555872 NUP160Q12769 1436 aa13.81□□□□□ -0.2
EFCAB11-208ENST00000555872 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
EFCAB11-208ENST00000555872 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
EFCAB11-208ENST00000555872 NEFMP07197 916 aa13.8□□□□□ -0.2
EFCAB11-208ENST00000555872 CCNB3Q8WWL7 1395 aa13.79□□□□□ -0.2
EFCAB11-208ENST00000555872 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
EFCAB11-208ENST00000555872 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
EFCAB11-208ENST00000555872 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
EFCAB11-208ENST00000555872 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
EFCAB11-208ENST00000555872 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.2
EFCAB11-208ENST00000555872 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
EFCAB11-208ENST00000555872 KDM4FA0A1W2PPD8 638 aa13.76□□□□□ -0.21
EFCAB11-208ENST00000555872 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
EFCAB11-208ENST00000555872 WASHC2CQ9Y4E1 1318 aa13.75□□□□□ -0.21
EFCAB11-208ENST00000555872 PCF11O94913 1555 aaKnown RBP13.75□□□□□ -0.21
EFCAB11-208ENST00000555872 FHOD3Q2V2M9 1422 aa13.74□□□□□ -0.21
EFCAB11-208ENST00000555872 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
EFCAB11-208ENST00000555872 KIAA0556O60303 1618 aa13.74□□□□□ -0.21
EFCAB11-208ENST00000555872 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms