RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 SCAPERQ9BY12 1400 aa22.23■■□□□ 1.15
TUBB3-207ENST00000554927 CEBPAP49715 358 aaPredicted RBP22.19■■□□□ 1.14
TUBB3-207ENST00000554927 ATP10AO60312 1499 aa22.18■■□□□ 1.14
TUBB3-207ENST00000554927 DMRT2Q9Y5R5 561 aa22.18■■□□□ 1.14
TUBB3-207ENST00000554927 PLCH2O75038 1416 aa22.17■■□□□ 1.14
TUBB3-207ENST00000554927 ILDR2Q71H61 639 aa22.17■■□□□ 1.14
TUBB3-207ENST00000554927 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
TUBB3-207ENST00000554927 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
TUBB3-207ENST00000554927 C9orf84Q5VXU9 1444 aa22.16■■□□□ 1.14
TUBB3-207ENST00000554927 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
TUBB3-207ENST00000554927 MYT1LQ9UL68 1186 aa22.15■■□□□ 1.14
TUBB3-207ENST00000554927 EFCAB2Q5VUJ9 269 aa22.14■■□□□ 1.13
TUBB3-207ENST00000554927 PREX1Q8TCU6 1659 aa22.14■■□□□ 1.13
TUBB3-207ENST00000554927 SOCS7O14512 581 aa22.13■■□□□ 1.13
TUBB3-207ENST00000554927 EEA1Q15075 1411 aa22.12■■□□□ 1.13
TUBB3-207ENST00000554927 UHRF1BP1Q6BDS2 1440 aa22.11■■□□□ 1.13
TUBB3-207ENST00000554927 CDK11AQ9UQ88 783 aaPredicted RBP22.06■■□□□ 1.12
TUBB3-207ENST00000554927 AFAP1Q8N556 730 aa22.05■■□□□ 1.12
TUBB3-207ENST00000554927 ZNF518AQ6AHZ1 1483 aa22.04■■□□□ 1.12
TUBB3-207ENST00000554927 ESF1Q9H501 851 aaKnown RBP22.04■■□□□ 1.12
TUBB3-207ENST00000554927 STRCQ7RTU9 1775 aa22.03■■□□□ 1.12
TUBB3-207ENST00000554927 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
TUBB3-207ENST00000554927 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.12
TUBB3-207ENST00000554927 ARHGAP5Q13017 1502 aa22.01■■□□□ 1.11
TUBB3-207ENST00000554927 SPATA31D1Q6ZQQ2 1576 aa21.99■■□□□ 1.11
TUBB3-207ENST00000554927 PTPRTO14522 1441 aa21.98■■□□□ 1.11
TUBB3-207ENST00000554927 FMN1Q68DA7 1419 aa21.98■■□□□ 1.11
TUBB3-207ENST00000554927 KIF14Q15058 1648 aa21.97■■□□□ 1.11
TUBB3-207ENST00000554927 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
TUBB3-207ENST00000554927 KDM5CP41229 1560 aa21.95■■□□□ 1.11
TUBB3-207ENST00000554927 CLIP1P30622 1438 aa21.95■■□□□ 1.1
TUBB3-207ENST00000554927 DIP2CQ9Y2E4 1556 aa21.95■■□□□ 1.1
TUBB3-207ENST00000554927 TROQ12816 1431 aaPredicted RBP21.94■■□□□ 1.1
TUBB3-207ENST00000554927 SETD1BQ9UPS6 1966 aaKnown RBP21.94■■□□□ 1.1
TUBB3-207ENST00000554927 TRAPPC8Q9Y2L5 1435 aa21.91■■□□□ 1.1
TUBB3-207ENST00000554927 C3P01024 1663 aa21.91■■□□□ 1.1
TUBB3-207ENST00000554927 REREQ9P2R6 1566 aa21.9■■□□□ 1.1
TUBB3-207ENST00000554927 MLH3Q9UHC1 1453 aa21.89■■□□□ 1.09
TUBB3-207ENST00000554927 ABCA6Q8N139 1617 aa21.88■■□□□ 1.09
TUBB3-207ENST00000554927 LTBP4Q8N2S1 1624 aa21.88■■□□□ 1.09
TUBB3-207ENST00000554927 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
TUBB3-207ENST00000554927 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
TUBB3-207ENST00000554927 AGLP35573 1532 aa21.85■■□□□ 1.09
TUBB3-207ENST00000554927 IQSEC2Q5JU85 1478 aa21.85■■□□□ 1.09
TUBB3-207ENST00000554927 CNTLNQ9NXG0 1405 aa21.85■■□□□ 1.09
TUBB3-207ENST00000554927 UBAP1LF5GYI3 381 aa21.81■■□□□ 1.08
TUBB3-207ENST00000554927 ABCC1P33527 1531 aa21.8■■□□□ 1.08
TUBB3-207ENST00000554927 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
TUBB3-207ENST00000554927 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
TUBB3-207ENST00000554927 NCKAP5LQ9HCH0 1330 aa21.8■■□□□ 1.08
TUBB3-207ENST00000554927 ZNF335Q9H4Z2 1342 aaPredicted RBP21.78■■□□□ 1.08
TUBB3-207ENST00000554927 PREX2Q70Z35 1606 aa21.77■■□□□ 1.08
TUBB3-207ENST00000554927 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
TUBB3-207ENST00000554927 ITSN2Q9NZM3 1697 aa21.76■■□□□ 1.07
TUBB3-207ENST00000554927 NPATQ14207 1427 aa21.76■■□□□ 1.07
TUBB3-207ENST00000554927 ZMYM3Q14202 1370 aa21.75■■□□□ 1.07
TUBB3-207ENST00000554927 KIDINS220Q9ULH0 1771 aa21.74■■□□□ 1.07
TUBB3-207ENST00000554927 LRRIQ1Q96JM4 1722 aa21.74■■□□□ 1.07
TUBB3-207ENST00000554927 SPAG9O60271 1321 aaKnown RBP21.72■■□□□ 1.07
TUBB3-207ENST00000554927 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
TUBB3-207ENST00000554927 PKD2Q13563 968 aa21.7■■□□□ 1.06
TUBB3-207ENST00000554927 SAMD9LQ8IVG5 1584 aa21.69■■□□□ 1.06
TUBB3-207ENST00000554927 MROH2AA6NES4 1674 aa21.69■■□□□ 1.06
TUBB3-207ENST00000554927 SCAF1Q9H7N4 1312 aaKnown RBP21.68■■□□□ 1.06
TUBB3-207ENST00000554927 CASKIN1Q8WXD9 1431 aa21.67■■□□□ 1.06
TUBB3-207ENST00000554927 HNRNPMP52272 730 aaKnown RBP eCLIP21.67■■□□□ 1.06
TUBB3-207ENST00000554927 GGT6Q6P531 493 aa21.66■■□□□ 1.06
TUBB3-207ENST00000554927 SUPT6HQ7KZ85 1726 aaKnown RBP21.66■■□□□ 1.06
TUBB3-207ENST00000554927 PPP6R1Q9UPN7 881 aa21.65■■□□□ 1.06
TUBB3-207ENST00000554927 SYCP2Q9BX26 1530 aa21.65■■□□□ 1.06
TUBB3-207ENST00000554927 PLA2R1Q13018 1463 aa21.64■■□□□ 1.06
TUBB3-207ENST00000554927 CDC42BPAQ5VT25 1732 aa21.64■■□□□ 1.06
TUBB3-207ENST00000554927 CLTCQ00610 1675 aaKnown RBP21.63■■□□□ 1.05
TUBB3-207ENST00000554927 MYO3AQ8NEV4 1616 aa21.63■■□□□ 1.05
TUBB3-207ENST00000554927 PIP4K2BP78356 416 aa21.62■■□□□ 1.05
TUBB3-207ENST00000554927 PTPRKQ15262 1439 aa21.62■■□□□ 1.05
TUBB3-207ENST00000554927 CEP170BQ9Y4F5 1589 aaPredicted RBP21.61■■□□□ 1.05
TUBB3-207ENST00000554927 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
TUBB3-207ENST00000554927 A2MP01023 1474 aa21.6■■□□□ 1.05
TUBB3-207ENST00000554927 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
TUBB3-207ENST00000554927 ZNF142P52746 1687 aaPredicted RBP21.6■■□□□ 1.05
TUBB3-207ENST00000554927 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
TUBB3-207ENST00000554927 CFDP1Q9UEE9 299 aaPredicted RBP21.59■■□□□ 1.05
TUBB3-207ENST00000554927 GPATCH8Q9UKJ3 1502 aaKnown RBP21.59■■□□□ 1.05
TUBB3-207ENST00000554927 HSPA1LP34931 641 aa21.58■■□□□ 1.05
TUBB3-207ENST00000554927 PLEKHH2Q8IVE3 1493 aa21.56■■□□□ 1.04
TUBB3-207ENST00000554927 TOM1O60784 492 aa21.55■■□□□ 1.04
TUBB3-207ENST00000554927 FYCO1Q9BQS8 1478 aa21.55■■□□□ 1.04
TUBB3-207ENST00000554927 PLXNC1O60486 1568 aa21.55■■□□□ 1.04
TUBB3-207ENST00000554927 KIAA1107Q9UPP5 1409 aa21.55■■□□□ 1.04
TUBB3-207ENST00000554927 CCNB3Q8WWL7 1395 aa21.54■■□□□ 1.04
TUBB3-207ENST00000554927 INO80Q9ULG1 1556 aaPredicted RBP21.53■■□□□ 1.04
TUBB3-207ENST00000554927 A2ML1A8K2U0 1454 aa21.52■■□□□ 1.04
TUBB3-207ENST00000554927 MED1Q15648 1581 aaPredicted RBP21.51■■□□□ 1.03
TUBB3-207ENST00000554927 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
TUBB3-207ENST00000554927 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
TUBB3-207ENST00000554927 CPS1P31327 1500 aa21.47■■□□□ 1.03
TUBB3-207ENST00000554927 TNRQ92752 1358 aa21.46■■□□□ 1.03
TUBB3-207ENST00000554927 SHANK2Q9UPX8 1470 aa21.45■■□□□ 1.03
TUBB3-207ENST00000554927 FBXO31Q5XUX0 539 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms