RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 CCDC7Q96M83 1385 aa16.05■□□□□ 0.16
XRCC3-208ENST00000554811 TSPY4P0CV99 314 aa16.04■□□□□ 0.16
XRCC3-208ENST00000554811 TSPY10P0CW01 314 aa16.04■□□□□ 0.16
XRCC3-208ENST00000554811 CFAP43Q8NDM7 1665 aa16.03■□□□□ 0.16
XRCC3-208ENST00000554811 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
XRCC3-208ENST00000554811 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
XRCC3-208ENST00000554811 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
XRCC3-208ENST00000554811 HNRNPMP52272 730 aaKnown RBP eCLIP16■□□□□ 0.15
XRCC3-208ENST00000554811 PRDM2Q13029 1718 aa16■□□□□ 0.15
XRCC3-208ENST00000554811 CNTLNQ9NXG0 1405 aa16■□□□□ 0.15
XRCC3-208ENST00000554811 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
XRCC3-208ENST00000554811 ST20-MTHFSA0A0A6YYL1 179 aa15.98■□□□□ 0.15
XRCC3-208ENST00000554811 NUP155O75694 1391 aa15.98■□□□□ 0.15
XRCC3-208ENST00000554811 AKNAQ7Z591 1439 aa15.97■□□□□ 0.15
XRCC3-208ENST00000554811 SUPT6HQ7KZ85 1726 aaKnown RBP15.97■□□□□ 0.15
XRCC3-208ENST00000554811 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
XRCC3-208ENST00000554811 ANP32AP39687 249 aaKnown RBP15.95■□□□□ 0.14
XRCC3-208ENST00000554811 EPRSP07814 1512 aaKnown RBP15.95■□□□□ 0.14
XRCC3-208ENST00000554811 USP47Q96K76 1375 aa15.95■□□□□ 0.14
XRCC3-208ENST00000554811 PRG4Q92954 1404 aaPredicted RBP15.95■□□□□ 0.14
XRCC3-208ENST00000554811 EHBP1L1Q8N3D4 1523 aa15.95■□□□□ 0.14
XRCC3-208ENST00000554811 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
XRCC3-208ENST00000554811 GRIN2BQ13224 1484 aa15.94■□□□□ 0.14
XRCC3-208ENST00000554811 ZBED9Q6R2W3 1325 aa15.93■□□□□ 0.14
XRCC3-208ENST00000554811 CUL7Q14999 1698 aa15.92■□□□□ 0.14
XRCC3-208ENST00000554811 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
XRCC3-208ENST00000554811 KDM6BO15054 1643 aa15.92■□□□□ 0.14
XRCC3-208ENST00000554811 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
XRCC3-208ENST00000554811 RTL5Q5HYW3 569 aaPredicted RBP15.92■□□□□ 0.14
XRCC3-208ENST00000554811 PLIN1O60240 522 aa15.89■□□□□ 0.13
XRCC3-208ENST00000554811 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
XRCC3-208ENST00000554811 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
XRCC3-208ENST00000554811 DAPK1P53355 1430 aa15.88■□□□□ 0.13
XRCC3-208ENST00000554811 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
XRCC3-208ENST00000554811 ANKRD30BQ9BXX2 1392 aa15.88■□□□□ 0.13
XRCC3-208ENST00000554811 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
XRCC3-208ENST00000554811 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
XRCC3-208ENST00000554811 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
XRCC3-208ENST00000554811 NOP58Q9Y2X3 529 aaKnown RBP15.86■□□□□ 0.13
XRCC3-208ENST00000554811 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
XRCC3-208ENST00000554811 ABCC5O15440 1437 aa15.86■□□□□ 0.13
XRCC3-208ENST00000554811 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
XRCC3-208ENST00000554811 SKAP1Q86WV1 359 aa15.86■□□□□ 0.13
XRCC3-208ENST00000554811 EXOC6Q8TAG9 804 aa15.84■□□□□ 0.13
XRCC3-208ENST00000554811 ROCK2O75116 1388 aaKnown RBP15.84■□□□□ 0.13
XRCC3-208ENST00000554811 ANKRD30AQ9BXX3 1397 aa15.84■□□□□ 0.13
XRCC3-208ENST00000554811 NCOA1Q15788 1441 aa15.83■□□□□ 0.12
XRCC3-208ENST00000554811 NBPF1Q3BBV0 1214 aa15.83■□□□□ 0.12
XRCC3-208ENST00000554811 IQGAP2Q13576 1575 aa15.83■□□□□ 0.12
XRCC3-208ENST00000554811 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.12
XRCC3-208ENST00000554811 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
XRCC3-208ENST00000554811 HECW1Q76N89 1606 aa15.82■□□□□ 0.12
XRCC3-208ENST00000554811 DEKP35659 375 aaKnown RBP15.82■□□□□ 0.12
XRCC3-208ENST00000554811 CDCA7LQ96GN5 454 aa15.82■□□□□ 0.12
XRCC3-208ENST00000554811 FANCIQ9NVI1 1328 aa15.8■□□□□ 0.12
XRCC3-208ENST00000554811 CHGAP10645 457 aaKnown RBP15.79■□□□□ 0.12
XRCC3-208ENST00000554811 DAXXQ9UER7 740 aaPredicted RBP15.79■□□□□ 0.12
XRCC3-208ENST00000554811 MIA2Q96PC5 1412 aa15.79■□□□□ 0.12
XRCC3-208ENST00000554811 RCAN3Q9UKA8 241 aa15.79■□□□□ 0.12
XRCC3-208ENST00000554811 ANKRD50Q9ULJ7 1429 aa15.78■□□□□ 0.12
XRCC3-208ENST00000554811 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
XRCC3-208ENST00000554811 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.12
XRCC3-208ENST00000554811 LRRIQ1Q96JM4 1722 aa15.77■□□□□ 0.12
XRCC3-208ENST00000554811 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.11
XRCC3-208ENST00000554811 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
XRCC3-208ENST00000554811 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
XRCC3-208ENST00000554811 TNNT2P45379 298 aaPredicted RBP15.75■□□□□ 0.11
XRCC3-208ENST00000554811 SAMD9Q5K651 1589 aa15.75■□□□□ 0.11
XRCC3-208ENST00000554811 ERICH6BQ5W0A0 696 aa15.74■□□□□ 0.11
XRCC3-208ENST00000554811 PANK3Q9H999 370 aa15.74■□□□□ 0.11
XRCC3-208ENST00000554811 WDR43Q15061 677 aaKnown RBP eCLIP15.74■□□□□ 0.11
XRCC3-208ENST00000554811 NEUROD2Q15784 382 aa15.73■□□□□ 0.11
XRCC3-208ENST00000554811 KIF15Q9NS87 1388 aa15.73■□□□□ 0.11
XRCC3-208ENST00000554811 RGS3P49796 1198 aa15.72■□□□□ 0.11
XRCC3-208ENST00000554811 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
XRCC3-208ENST00000554811 KIAA1107Q9UPP5 1409 aa15.72■□□□□ 0.11
XRCC3-208ENST00000554811 KDM5BQ9UGL1 1544 aa15.72■□□□□ 0.11
XRCC3-208ENST00000554811 CAMSAP2Q08AD1 1489 aa15.72■□□□□ 0.11
XRCC3-208ENST00000554811 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
XRCC3-208ENST00000554811 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.11
XRCC3-208ENST00000554811 MYBBP1AQ9BQG0 1328 aaKnown RBP15.71■□□□□ 0.11
XRCC3-208ENST00000554811 CARMIL2Q6F5E8 1435 aa15.71■□□□□ 0.11
XRCC3-208ENST00000554811 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
XRCC3-208ENST00000554811 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.1
XRCC3-208ENST00000554811 SLC4A3P48751 1232 aa15.7■□□□□ 0.1
XRCC3-208ENST00000554811 TROQ12816 1431 aaPredicted RBP15.7■□□□□ 0.1
XRCC3-208ENST00000554811 CANXP27824 592 aaKnown RBP15.69■□□□□ 0.1
XRCC3-208ENST00000554811 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
XRCC3-208ENST00000554811 KNSTRNQ9Y448 316 aa15.69■□□□□ 0.1
XRCC3-208ENST00000554811 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
XRCC3-208ENST00000554811 TCOF1Q13428 1488 aaKnown RBP15.68■□□□□ 0.1
XRCC3-208ENST00000554811 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
XRCC3-208ENST00000554811 WDR62O43379 1518 aa15.67■□□□□ 0.1
XRCC3-208ENST00000554811 IPO9Q96P70 1041 aaKnown RBP15.67■□□□□ 0.1
XRCC3-208ENST00000554811 ROCK1Q13464 1354 aa15.67■□□□□ 0.1
XRCC3-208ENST00000554811 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
XRCC3-208ENST00000554811 RALBP1Q15311 655 aa15.67■□□□□ 0.1
XRCC3-208ENST00000554811 CRBNQ96SW2 442 aa15.66■□□□□ 0.1
XRCC3-208ENST00000554811 TEX14Q8IWB6 1497 aa15.66■□□□□ 0.1
XRCC3-208ENST00000554811 C9orf84Q5VXU9 1444 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms