RNA–Protein interactions for RNA: ENST00000554497.1

TMEM30B-201, Transcript of transmembrane protein 30B, humanhuman

TSL 4

Gene TMEM30B, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-201ENST00000554497 SAMD9Q5K651 1589 aa21.27■■□□□ 1
TMEM30B-201ENST00000554497 HECW1Q76N89 1606 aa21.27■■□□□ 1
TMEM30B-201ENST00000554497 MAGI2Q86UL8 1455 aa21.26■□□□□ 0.99
TMEM30B-201ENST00000554497 CEBPAP49715 358 aaPredicted RBP21.25■□□□□ 0.99
TMEM30B-201ENST00000554497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.24■□□□□ 0.99
TMEM30B-201ENST00000554497 UHRF1BP1Q6BDS2 1440 aa21.2■□□□□ 0.98
TMEM30B-201ENST00000554497 SETD1BQ9UPS6 1966 aaKnown RBP21.19■□□□□ 0.98
TMEM30B-201ENST00000554497 LTBP4Q8N2S1 1624 aa21.19■□□□□ 0.98
TMEM30B-201ENST00000554497 PLEKHD1A6NEE1 506 aa21.19■□□□□ 0.98
TMEM30B-201ENST00000554497 PTPRTO14522 1441 aa21.19■□□□□ 0.98
TMEM30B-201ENST00000554497 ATP10AO60312 1499 aa21.17■□□□□ 0.98
TMEM30B-201ENST00000554497 C9orf84Q5VXU9 1444 aa21.16■□□□□ 0.98
TMEM30B-201ENST00000554497 SCAPERQ9BY12 1400 aa21.15■□□□□ 0.98
TMEM30B-201ENST00000554497 IQSEC2Q5JU85 1478 aa21.13■□□□□ 0.97
TMEM30B-201ENST00000554497 PLCH2O75038 1416 aa21.07■□□□□ 0.96
TMEM30B-201ENST00000554497 C3P01024 1663 aa21.06■□□□□ 0.96
TMEM30B-201ENST00000554497 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
TMEM30B-201ENST00000554497 RANGAP1P46060 587 aaPredicted RBP21.03■□□□□ 0.96
TMEM30B-201ENST00000554497 CDK13Q14004 1512 aaKnown RBP21.01■□□□□ 0.95
TMEM30B-201ENST00000554497 MYO5CQ9NQX4 1742 aa20.98■□□□□ 0.95
TMEM30B-201ENST00000554497 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
TMEM30B-201ENST00000554497 UBAP1LF5GYI3 381 aa20.98■□□□□ 0.95
TMEM30B-201ENST00000554497 KDM5CP41229 1560 aa20.97■□□□□ 0.95
TMEM30B-201ENST00000554497 TRAPPC8Q9Y2L5 1435 aa20.97■□□□□ 0.95
TMEM30B-201ENST00000554497 ZNF518AQ6AHZ1 1483 aa20.97■□□□□ 0.95
TMEM30B-201ENST00000554497 EFCAB2Q5VUJ9 269 aa20.96■□□□□ 0.95
TMEM30B-201ENST00000554497 REREQ9P2R6 1566 aa20.96■□□□□ 0.95
TMEM30B-201ENST00000554497 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
TMEM30B-201ENST00000554497 ZNF335Q9H4Z2 1342 aaPredicted RBP20.94■□□□□ 0.94
TMEM30B-201ENST00000554497 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
TMEM30B-201ENST00000554497 ABCA6Q8N139 1617 aa20.93■□□□□ 0.94
TMEM30B-201ENST00000554497 MED1Q15648 1581 aaPredicted RBP20.91■□□□□ 0.94
TMEM30B-201ENST00000554497 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
TMEM30B-201ENST00000554497 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
TMEM30B-201ENST00000554497 MYT1LQ9UL68 1186 aa20.9■□□□□ 0.94
TMEM30B-201ENST00000554497 AGLP35573 1532 aa20.89■□□□□ 0.94
TMEM30B-201ENST00000554497 ESF1Q9H501 851 aaKnown RBP20.88■□□□□ 0.93
TMEM30B-201ENST00000554497 KIF14Q15058 1648 aa20.88■□□□□ 0.93
TMEM30B-201ENST00000554497 NCKAP5LQ9HCH0 1330 aa20.87■□□□□ 0.93
TMEM30B-201ENST00000554497 ARHGAP5Q13017 1502 aa20.87■□□□□ 0.93
TMEM30B-201ENST00000554497 MLH3Q9UHC1 1453 aa20.85■□□□□ 0.93
TMEM30B-201ENST00000554497 CNTLNQ9NXG0 1405 aa20.85■□□□□ 0.93
TMEM30B-201ENST00000554497 NPATQ14207 1427 aa20.83■□□□□ 0.93
TMEM30B-201ENST00000554497 HSPA1LP34931 641 aa20.82■□□□□ 0.92
TMEM30B-201ENST00000554497 MROH2AA6NES4 1674 aa20.8■□□□□ 0.92
TMEM30B-201ENST00000554497 ZNF142P52746 1687 aaPredicted RBP20.78■□□□□ 0.92
TMEM30B-201ENST00000554497 PLA2R1Q13018 1463 aa20.78■□□□□ 0.92
TMEM30B-201ENST00000554497 CDC42BPBQ9Y5S2 1711 aa20.78■□□□□ 0.92
TMEM30B-201ENST00000554497 KIDINS220Q9ULH0 1771 aa20.77■□□□□ 0.92
TMEM30B-201ENST00000554497 SCAF1Q9H7N4 1312 aaKnown RBP20.77■□□□□ 0.91
TMEM30B-201ENST00000554497 TCOF1Q13428 1488 aaKnown RBP20.76■□□□□ 0.91
TMEM30B-201ENST00000554497 SUPT6HQ7KZ85 1726 aaKnown RBP20.76■□□□□ 0.91
TMEM30B-201ENST00000554497 MYO3AQ8NEV4 1616 aa20.76■□□□□ 0.91
TMEM30B-201ENST00000554497 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
TMEM30B-201ENST00000554497 TROQ12816 1431 aaPredicted RBP20.76■□□□□ 0.91
TMEM30B-201ENST00000554497 ZMYM3Q14202 1370 aa20.75■□□□□ 0.91
TMEM30B-201ENST00000554497 ABCC1P33527 1531 aa20.75■□□□□ 0.91
TMEM30B-201ENST00000554497 PIP4K2BP78356 416 aa20.75■□□□□ 0.91
TMEM30B-201ENST00000554497 PKD2Q13563 968 aa20.75■□□□□ 0.91
TMEM30B-201ENST00000554497 ITSN2Q9NZM3 1697 aa20.74■□□□□ 0.91
TMEM30B-201ENST00000554497 CDK11AQ9UQ88 783 aaPredicted RBP20.74■□□□□ 0.91
TMEM30B-201ENST00000554497 CEP170BQ9Y4F5 1589 aaPredicted RBP20.73■□□□□ 0.91
TMEM30B-201ENST00000554497 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
TMEM30B-201ENST00000554497 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
TMEM30B-201ENST00000554497 PREX2Q70Z35 1606 aa20.7■□□□□ 0.9
TMEM30B-201ENST00000554497 CLIP1P30622 1438 aa20.7■□□□□ 0.9
TMEM30B-201ENST00000554497 CLTCQ00610 1675 aaKnown RBP20.69■□□□□ 0.9
TMEM30B-201ENST00000554497 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
TMEM30B-201ENST00000554497 TOM1O60784 492 aa20.67■□□□□ 0.9
TMEM30B-201ENST00000554497 PTPRKQ15262 1439 aa20.67■□□□□ 0.9
TMEM30B-201ENST00000554497 LRRIQ1Q96JM4 1722 aa20.67■□□□□ 0.9
TMEM30B-201ENST00000554497 EEA1Q15075 1411 aa20.66■□□□□ 0.9
TMEM30B-201ENST00000554497 SAMD9LQ8IVG5 1584 aa20.63■□□□□ 0.89
TMEM30B-201ENST00000554497 CPS1P31327 1500 aa20.63■□□□□ 0.89
TMEM30B-201ENST00000554497 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
TMEM30B-201ENST00000554497 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
TMEM30B-201ENST00000554497 SHANK2Q9UPX8 1470 aa20.6■□□□□ 0.89
TMEM30B-201ENST00000554497 POLR1AO95602 1720 aaPredicted RBP20.59■□□□□ 0.89
TMEM30B-201ENST00000554497 CDC42BPAQ5VT25 1732 aa20.59■□□□□ 0.89
TMEM30B-201ENST00000554497 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
TMEM30B-201ENST00000554497 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
TMEM30B-201ENST00000554497 A2ML1A8K2U0 1454 aa20.58■□□□□ 0.89
TMEM30B-201ENST00000554497 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
TMEM30B-201ENST00000554497 SPAG9O60271 1321 aaKnown RBP20.54■□□□□ 0.88
TMEM30B-201ENST00000554497 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
TMEM30B-201ENST00000554497 ATP7AQ04656 1500 aa20.53■□□□□ 0.88
TMEM30B-201ENST00000554497 VWDEQ8N2E2 1590 aa20.53■□□□□ 0.88
TMEM30B-201ENST00000554497 A2MP01023 1474 aa20.52■□□□□ 0.88
TMEM30B-201ENST00000554497 GGT6Q6P531 493 aa20.52■□□□□ 0.88
TMEM30B-201ENST00000554497 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
TMEM30B-201ENST00000554497 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
TMEM30B-201ENST00000554497 RGS17Q9UGC6 210 aaPredicted RBP20.5■□□□□ 0.87
TMEM30B-201ENST00000554497 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
TMEM30B-201ENST00000554497 HNRNPMP52272 730 aaKnown RBP eCLIP20.48■□□□□ 0.87
TMEM30B-201ENST00000554497 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
TMEM30B-201ENST00000554497 UBTFP17480 764 aaKnown RBP20.45■□□□□ 0.86
TMEM30B-201ENST00000554497 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
TMEM30B-201ENST00000554497 TNRQ92752 1358 aa20.43■□□□□ 0.86
TMEM30B-201ENST00000554497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.43■□□□□ 0.86
TMEM30B-201ENST00000554497 GPATCH8Q9UKJ3 1502 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms